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LOCUS XM_013254457 2848 bp mRNA linear INV 02-SEP-2023 (LOC106088779), transcript variant X5, mRNA. ACCESSION XM_013254457 VERSION XM_013254457.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013254457.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2848 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2848 /gene="LOC106088779" /note="chondroitin sulfate synthase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106088779" CDS 321..2810 /gene="LOC106088779" /codon_start=1 /product="chondroitin sulfate synthase 1" /protein_id="XP_013109911.2" /db_xref="GeneID:106088779" /translation="MMMSKNSMTKRKTLIFACFGIAIGLCIGTVLKNYRALEIVKRCN PKPNNQKTPFEIIGLGPDDTIQNSQKNLVFVGVMTAKNFIEGRAKAVYDTWGKEVPGR IAFFSSEGSFSDELPVVGLKNVDDRYPPQKKSFMMLYYMYENFIDKFEWFIRADDDVY IEPQKLENFLRSIDSSKPQFIGQAGKGNTEEFGLLSLEFDENFCMGGPGVILSSETLR RVAPHIPTCLKNLYSTHEDVEVGRCVQKFAGIPCTWNYEMQYILRHNSSGRAAFTGKL KRKEIHNAISLHPIKQAPLMYRLHSYIQGLKAEEMRQESLTLHRDIKRMAKYLEIPED SKYLVPGITLIPEEENSKRHIEDHNILGISPDLNKCVPKTREDLLEWSFIARGLYSIE HANPKHKIDSATREGLEDVITEVMENINNYSRQRGRVIEFRELLYGYTRLNALHGQDL ILDLLLIYKKYRGKKMTVPVRRHLYVQRAFTGIFIKEFEEDFYNTTLHRSFFKNILNQ GVEKLSNHFSLPGLLSSAKSPNGGGNSKIVFVLPIAGRLATFQRFLEVYESVALKEDK NCDLLVVIFGKGEEVNDHLELLKQLKGRNIYHQINYILRQEEFSRGVALDTAARSSYI HDDNIILFIDVDMIFKSETLQRIRMNTVQGKQVYLPIVFSQYDPRRQEQQYISPDEIT NESGYFRQFGFGICAIYKSDIMDESINGFDKDITGWGLEDVKFLEKIVKNGHHQNSFM VNTAEVSEDYNAKASQLRRLSVFRAPDPSLVHIYHDITCDVNLDVAQYNMCLGTKANS LGSTHLMENLFYDNFENVEFIKDFNRRKEMR" polyA_site 2848 /gene="LOC106088779" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcattcatcg aaatttgacg tctttcgtct tatgtttgca gaattcaact ctttaggcat 61 ttatttcaat tgaaaaaaag aaaactataa gcgaaagaaa tcgatgtaca gatcagtgtc 121 attgttctga taatcgccta taaaaatatc cagttaatca aagtgcaaca aaaacgaaca 181 aatgcaatat tcattggatt tcggataaac ctgattaaaa tagaactcat cgttgcagcg 241 gtatcaatga gttaatccaa gggaggacat tgcacttttc atcaccattt atccccagca 301 tattcaaaat tgttctcgta atgatgatga gcaaaaattc catgactaag cggaaaacgc 361 ttatatttgc ttgttttggc attgccattg gcctctgcat aggaacggtc ctcaaaaatt 421 atagggccct ggaaattgta aaacgttgta atccaaaacc gaacaatcag aaaacgcctt 481 tcgaaattat aggcctgggt ccagatgaca cgatacaaaa ctcccaaaaa aatcttgtat 541 tcgttggtgt gatgacggca aaaaacttca ttgaaggtcg agcgaaagct gtctatgata 601 cctggggcaa ggaggtgcca gggcgtattg cctttttcag ctcggagggt tcgttttcag 661 acgaattgcc agtggtcggt ttgaaaaatg ttgacgatcg ttatccgcca caaaagaagt 721 catttatgat gctgtactat atgtatgaaa actttataga caaattcgaa tggtttatac 781 gggccgatga tgacgtttac atagagccgc agaaattgga aaactttctg agatctatag 841 acagctctaa gccccaattc ataggtcaag ctggcaaagg aaataccgaa gaatttggtt 901 tgttgtccct ggagttcgat gagaattttt gcatgggcgg cccgggtgtc attttaagca 961 gtgaaacttt aagaagagtc gcccctcaca taccaacttg cctaaagaat ctctacagca 1021 cccatgaaga tgtcgaagtg ggacgttgtg tacagaaatt tgctggcatt ccttgtacgt 1081 ggaactatga gatgcaatac attttgaggc acaattccag tggccgcgca gcatttacag 1141 gaaaactaaa gcgtaaagag atacacaatg ccatctcgtt gcatcccatt aaacaggctc 1201 cactaatgta tcgtctacat tcctatattc agggtttaaa agctgaagag atgcgccaag 1261 aatcattgac gctgcatcgt gatatcaaac gcatggctaa atatttggaa ataccagaag 1321 atagcaaata tttggttccg ggcatcacat taattccaga ggaagaaaac agtaaaaggc 1381 acatagagga tcacaatata ttgggtatta gcccagattt gaataaatgt gtacctaaaa 1441 cccgagagga tcttttagag tggtctttca ttgcaagagg tctatattcc atagagcatg 1501 ccaatcccaa acacaaaatc gattctgcca ccagagaagg cctagaagat gtcattaccg 1561 aagttatgga aaatattaac aactattcgc gccagcgagg acgtgttata gaatttcgtg 1621 agttactgta tggctacacc agacttaatg ctctacatgg ccaagatttg atattggatt 1681 tgttgttgat atacaaaaaa tatcgaggca agaaaatgac ggtgccagtt agaagacatt 1741 tgtatgtaca gcgagcgttt actggtatat ttatcaagga gttcgaggag gacttctaca 1801 ataccactct acacagaagt ttctttaaaa acattctcaa tcaaggtgtg gagaaattgt 1861 ccaatcattt ttctttgcct ggactcctgt catcggccaa atctccaaat ggcggaggaa 1921 attcaaaaat tgtgttcgtc ttacccatag cgggacgttt agccactttc cagcgtttct 1981 tggaggtata tgaaagtgta gccctaaaag aggataaaaa ttgtgatttg cttgtggtga 2041 tttttggcaa aggtgaagaa gtaaatgatc atctggaatt gttgaagcaa ctgaagggtc 2101 gcaatatata ccatcaaata aactatatac ttcgccagga ggagttctct cgaggagtgg 2161 ctttggatac agctgcacga tcgtcttata tacacgatga caatattata cttttcatag 2221 atgtggatat gatattcaaa tcggaaacac tgcaaagaat tcgcatgaac actgtacaag 2281 gaaaacaggt ttatttgcct attgttttca gtcaatacga tccccggcgg caagaacagc 2341 aatatatctc acccgatgag ataacaaatg aaagtggtta cttccgccag tttggctttg 2401 gcatatgtgc catctataag tcggatatca tggacgaaag cattaatggc tttgacaaag 2461 acataacagg ctggggcctg gaagatgtca agttcctgga gaaaattgtc aagaatggac 2521 accatcaaaa ttcctttatg gttaacacag ccgaagtttc cgaagattac aatgcgaaag 2581 cttcacagct gcggcgcctc tcagtattcc gagcgccaga tcctagtttg gtacacattt 2641 atcatgacat cacatgtgat gtcaacctag atgtggccca gtacaatatg tgccttggca 2701 caaaggcgaa ttcattgggc agtacccatt taatggagaa cttgttctac gacaatttcg 2761 aaaatgttga atttattaaa gattttaacc gcagaaaaga gatgagatga tgggcttagt 2821 ttatcataac tttaagggcg ggaattta