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LOCUS XM_013254456 2895 bp mRNA linear INV 02-SEP-2023 (LOC106088779), transcript variant X3, mRNA. ACCESSION XM_013254456 VERSION XM_013254456.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013254456.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2895 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2895 /gene="LOC106088779" /note="chondroitin sulfate synthase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106088779" CDS 368..2857 /gene="LOC106088779" /codon_start=1 /product="chondroitin sulfate synthase 1" /protein_id="XP_013109910.2" /db_xref="GeneID:106088779" /translation="MMMSKNSMTKRKTLIFACFGIAIGLCIGTVLKNYRALEIVKRCN PKPNNQKTPFEIIGLGPDDTIQNSQKNLVFVGVMTAKNFIEGRAKAVYDTWGKEVPGR IAFFSSEGSFSDELPVVGLKNVDDRYPPQKKSFMMLYYMYENFIDKFEWFIRADDDVY IEPQKLENFLRSIDSSKPQFIGQAGKGNTEEFGLLSLEFDENFCMGGPGVILSSETLR RVAPHIPTCLKNLYSTHEDVEVGRCVQKFAGIPCTWNYEMQYILRHNSSGRAAFTGKL KRKEIHNAISLHPIKQAPLMYRLHSYIQGLKAEEMRQESLTLHRDIKRMAKYLEIPED SKYLVPGITLIPEEENSKRHIEDHNILGISPDLNKCVPKTREDLLEWSFIARGLYSIE HANPKHKIDSATREGLEDVITEVMENINNYSRQRGRVIEFRELLYGYTRLNALHGQDL ILDLLLIYKKYRGKKMTVPVRRHLYVQRAFTGIFIKEFEEDFYNTTLHRSFFKNILNQ GVEKLSNHFSLPGLLSSAKSPNGGGNSKIVFVLPIAGRLATFQRFLEVYESVALKEDK NCDLLVVIFGKGEEVNDHLELLKQLKGRNIYHQINYILRQEEFSRGVALDTAARSSYI HDDNIILFIDVDMIFKSETLQRIRMNTVQGKQVYLPIVFSQYDPRRQEQQYISPDEIT NESGYFRQFGFGICAIYKSDIMDESINGFDKDITGWGLEDVKFLEKIVKNGHHQNSFM VNTAEVSEDYNAKASQLRRLSVFRAPDPSLVHIYHDITCDVNLDVAQYNMCLGTKANS LGSTHLMENLFYDNFENVEFIKDFNRRKEMR" polyA_site 2895 /gene="LOC106088779" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccccatatgt gtgtgcgaga gaaagaaaaa aagaacggaa gaatgtataa aaaataatta 61 cattcataca caattcttat gtttgcagaa ttcaactctt taggcattta tttcaattga 121 aaaaaagaaa actataagcg aaagaaatcg atgtacagat cagtgtcatt gttctgataa 181 tcgcctataa aaatatccag ttaatcaaag tgcaacaaaa acgaacaaat gcaatattca 241 ttggatttcg gataaacctg attaaaatag aactcatcgt tgcagcggta tcaatgagtt 301 aatccaaggg aggacattgc acttttcatc accatttatc cccagcatat tcaaaattgt 361 tctcgtaatg atgatgagca aaaattccat gactaagcgg aaaacgctta tatttgcttg 421 ttttggcatt gccattggcc tctgcatagg aacggtcctc aaaaattata gggccctgga 481 aattgtaaaa cgttgtaatc caaaaccgaa caatcagaaa acgcctttcg aaattatagg 541 cctgggtcca gatgacacga tacaaaactc ccaaaaaaat cttgtattcg ttggtgtgat 601 gacggcaaaa aacttcattg aaggtcgagc gaaagctgtc tatgatacct ggggcaagga 661 ggtgccaggg cgtattgcct ttttcagctc ggagggttcg ttttcagacg aattgccagt 721 ggtcggtttg aaaaatgttg acgatcgtta tccgccacaa aagaagtcat ttatgatgct 781 gtactatatg tatgaaaact ttatagacaa attcgaatgg tttatacggg ccgatgatga 841 cgtttacata gagccgcaga aattggaaaa ctttctgaga tctatagaca gctctaagcc 901 ccaattcata ggtcaagctg gcaaaggaaa taccgaagaa tttggtttgt tgtccctgga 961 gttcgatgag aatttttgca tgggcggccc gggtgtcatt ttaagcagtg aaactttaag 1021 aagagtcgcc cctcacatac caacttgcct aaagaatctc tacagcaccc atgaagatgt 1081 cgaagtggga cgttgtgtac agaaatttgc tggcattcct tgtacgtgga actatgagat 1141 gcaatacatt ttgaggcaca attccagtgg ccgcgcagca tttacaggaa aactaaagcg 1201 taaagagata cacaatgcca tctcgttgca tcccattaaa caggctccac taatgtatcg 1261 tctacattcc tatattcagg gtttaaaagc tgaagagatg cgccaagaat cattgacgct 1321 gcatcgtgat atcaaacgca tggctaaata tttggaaata ccagaagata gcaaatattt 1381 ggttccgggc atcacattaa ttccagagga agaaaacagt aaaaggcaca tagaggatca 1441 caatatattg ggtattagcc cagatttgaa taaatgtgta cctaaaaccc gagaggatct 1501 tttagagtgg tctttcattg caagaggtct atattccata gagcatgcca atcccaaaca 1561 caaaatcgat tctgccacca gagaaggcct agaagatgtc attaccgaag ttatggaaaa 1621 tattaacaac tattcgcgcc agcgaggacg tgttatagaa tttcgtgagt tactgtatgg 1681 ctacaccaga cttaatgctc tacatggcca agatttgata ttggatttgt tgttgatata 1741 caaaaaatat cgaggcaaga aaatgacggt gccagttaga agacatttgt atgtacagcg 1801 agcgtttact ggtatattta tcaaggagtt cgaggaggac ttctacaata ccactctaca 1861 cagaagtttc tttaaaaaca ttctcaatca aggtgtggag aaattgtcca atcatttttc 1921 tttgcctgga ctcctgtcat cggccaaatc tccaaatggc ggaggaaatt caaaaattgt 1981 gttcgtctta cccatagcgg gacgtttagc cactttccag cgtttcttgg aggtatatga 2041 aagtgtagcc ctaaaagagg ataaaaattg tgatttgctt gtggtgattt ttggcaaagg 2101 tgaagaagta aatgatcatc tggaattgtt gaagcaactg aagggtcgca atatatacca 2161 tcaaataaac tatatacttc gccaggagga gttctctcga ggagtggctt tggatacagc 2221 tgcacgatcg tcttatatac acgatgacaa tattatactt ttcatagatg tggatatgat 2281 attcaaatcg gaaacactgc aaagaattcg catgaacact gtacaaggaa aacaggttta 2341 tttgcctatt gttttcagtc aatacgatcc ccggcggcaa gaacagcaat atatctcacc 2401 cgatgagata acaaatgaaa gtggttactt ccgccagttt ggctttggca tatgtgccat 2461 ctataagtcg gatatcatgg acgaaagcat taatggcttt gacaaagaca taacaggctg 2521 gggcctggaa gatgtcaagt tcctggagaa aattgtcaag aatggacacc atcaaaattc 2581 ctttatggtt aacacagccg aagtttccga agattacaat gcgaaagctt cacagctgcg 2641 gcgcctctca gtattccgag cgccagatcc tagtttggta cacatttatc atgacatcac 2701 atgtgatgtc aacctagatg tggcccagta caatatgtgc cttggcacaa aggcgaattc 2761 attgggcagt acccatttaa tggagaactt gttctacgac aatttcgaaa atgttgaatt 2821 tattaaagat tttaaccgca gaaaagagat gagatgatgg gcttagttta tcataacttt 2881 aagggcggga attta