PREDICTED: Stomoxys calcitrans gamma-butyrobetaine dioxygenase

LOCUS       XM_013254420            1511 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106088752), mRNA.
ACCESSION   XM_013254420
VERSION     XM_013254420.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013254420.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1511
                     /gene="LOC106088752"
                     /note="gamma-butyrobetaine dioxygenase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:106088752"
     CDS             68..1342
                     /gene="LOC106088752"
                     /codon_start=1
                     /product="gamma-butyrobetaine dioxygenase"
                     /protein_id="XP_013109874.2"
                     /db_xref="GeneID:106088752"
                     /translation="MFKRTLNQLINRIPPSNFPALANCQLRRFISASVENDKFVVVLQ
                     SNSQTESSSSSSLAPLKFPSVWLRDNCCCAQCFHPTSKSRKHDWDKFDVNVRVKQLQT
                     NEQTKQLIIDWSDNHRSVYDLEWLQERAFIDARRQEYLHDFYRPKPKHWSGADFDKVT
                     EIFDFHDVINTDEALKKWLEALAIYGVAIIRNSPIEKTVVRQLAERVGFIRRTTYGEE
                     FIVQSKPGAKNVAYLSDPLPLHTDLPYYEYKPSCNILHCMVQSKSVGGSNLLVDAFHI
                     ADCMRADYPEDYKILTQTLVDWNDIGSEDDKHFHNIWRAPVICLDNDGNYTRINHSIP
                     QRDSHFSVPLDAVIPWYEAYAKFVRLAREDAHSFKTKPGDVLTFNNIRLLHGRTGYDD
                     TEENVRYIVGAYLDWDIIYSKLRVLKTQAGGF"
ORIGIN      
        1 ccggcaacac ttaaacacgt ctgcaaaacg accgaaaacg tggcgtataa ctcactcata
       61 aagcggaatg tttaaacgca ctctaaatca gttaatcaat agaataccac cttcgaattt
      121 tcctgctctt gccaattgcc agctacgacg tttcattagt gcctccgtgg aaaatgacaa
      181 attcgtggtg gtgttgcaat caaatagcca aacagaatcg tcgtcctcat cctcgttggc
      241 tccgttaaag ttccccagtg tttggctgcg tgataattgt tgttgtgccc aatgttttca
      301 tcccacatcg aagtcacgta aacatgactg ggataaattc gatgttaatg ttcgagttaa
      361 gcagctacaa acaaatgagc aaaccaaaca attgattatc gattggagtg ataatcaccg
      421 ttcagtgtac gatctcgaat ggttgcagga acgtgctttc atcgatgctc gtcgccagga
      481 gtatttacat gatttctatc gtcccaaacc caagcattgg agtggtgctg attttgataa
      541 agtcactgag atttttgatt ttcatgatgt cattaatacg gatgaagccc tcaagaaatg
      601 gcttgaagcc ttagccattt atggagtggc cattataaga aactccccca tagagaagac
      661 ggtcgtgcgc cagttggcag aaagagtggg ttttatacgt cgtactacat atggtgagga
      721 gttcattgtg caatcgaaac caggtgccaa aaatgtagcc tacctctccg accctctgcc
      781 actgcacacg gatttgccct actacgaata caagccaagt tgcaatattc tacactgtat
      841 ggtgcaatcc aaatccgtgg gtggcagtaa tctcctggtg gatgcattcc acattgcgga
      901 ttgcatgaga gctgactacc cagaggatta caaaatttta acgcagacat tggtggactg
      961 gaatgacatt ggcagtgagg atgacaaaca ttttcataac atttggcgtg ccccagtgat
     1021 atgtttagac aatgacggaa attatacgcg cataaatcac agtatacctc aacgtgacag
     1081 ccatttttcg gtgccgctgg atgccgtaat accatggtat gaggcctatg cgaaatttgt
     1141 acggctggct cgggaggatg cccactcgtt taagacgaag cctggtgatg tgttgacttt
     1201 caataatatt cgtctgttgc acggccgcac cggctacgat gacaccgagg agaatgtacg
     1261 atacattgtg ggtgcctact tggactggga cataatttat tccaagttga gggtattgaa
     1321 aacgcaagcg ggaggatttt gagaaggaaa ttggagaaaa gcagtcaagc aagtcacaat
     1381 acaaacaaag aaaaatattg gaaaatctgg tgtttgctta acgttcctta ctttaagaag
     1441 aaaacttgtt taaaatgtta aagagttgga aatttaaaga tgttttattt cagtttacat
     1501 ttacagaata c