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LOCUS XM_013254265 2307 bp mRNA linear INV 02-SEP-2023 actin-dependent regulator of chromatin subfamily E member 1 (LOC106088651), mRNA. ACCESSION XM_013254265 VERSION XM_013254265.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq; corrected model. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) and transcript sequence (GDIM01024157.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013254265.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 1088 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-1219 OY720438.1 95336650-95337868 c 1220-2307 GDIM01024157.1 821-1908 FEATURES Location/Qualifiers source 1..2307 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2307 /gene="LOC106088651" /note="SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1; The sequence of the model RefSeq transcript was modified relative to its source genomic sequence to represent the inferred CDS: added 1088 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106088651" CDS 120..1202 /gene="LOC106088651" /codon_start=1 /product="SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1" /protein_id="XP_013109719.2" /db_xref="GeneID:106088651" /translation="MSLPSNYKQIAPAPPSTPASGGTGSSGGGRSRSSGAGSASERNK DNTPIFTHSNYSNPAFTPQKAGKSSSSKNQSESRAPKPPKPPEKPILPYMRYSKKIWD SVKAQHPDLKLWELGKKIGAMWKQLTDAEKQEFVDEYEADKAEYEKTLKSYHNSPAYQ AYLAAKSKAKVDGDIHETPSRGGGGKGQQERRIDIQPAEDEDDPDEGYSFKHVAYARY LRNHRLINEIFSDAVVPDVRSVVTTQRMQVLKRQVSSLTMHQTKLEAELQQMEEKFEA KKQRMMESSLAFQEELKRHCKPAVDDETFQKMVQKMYEEMKRQRSSEDPNNAAANKLP AMGGPVAATAGTGVGAAGAPAATHRR" ORIGIN 1 ttgacagcta agggattttc tgtgtagtgg agaaaattgt ggtgtttgcg gctagaaagt 61 gaaaaatttg caaattcaag caacttattt aattaaacta aacttttgga agacatacaa 121 tgtctttacc aagtaactat aaacaaattg cccctgctcc accttcaaca ccggcttctg 181 gtggcaccgg cagcagtggt ggtggccggt ctcgctcctc tggtgctggt tcggcgtcgg 241 aacgcaataa agataatact cctatattta ctcatagtaa ttacagcaat ccggcgttta 301 cgccacagaa agcgggcaaa tcttcttcaa gtaaaaatca gtctgaaagc cgtgccccca 361 aacctccaaa gccaccagag aaacccatat tgccctatat gagatattca aagaaaatat 421 gggactctgt gaaagcacaa catccagatt tgaagctatg ggaattggga aagaagatag 481 gagcaatgtg gaaacaattg actgatgcag aaaagcagga attcgtcgat gaatatgaag 541 ccgataaggc tgaatatgaa aaaaccttaa aatcctacca caactctccg gcttaccagg 601 cctatttggc agctaaaagt aaggccaagg tggatggcga tatccatgaa acaccctcga 661 gaggcggtgg aggcaaaggt caacaggaaa gacgcattga tatacagcct gcagaagatg 721 aagatgatcc tgatgaaggc tactccttta agcatgtagc ctatgcacgt tatttgcgta 781 atcatcgttt aatcaatgag atattctccg atgcggtagt accagatgtt cgatccgtgg 841 tgactacgca acgcatgcag gtgctaaagc gacaggtcag ctcgttgact atgcaccaga 901 ctaagttgga agcagaattg caacaaatgg aagaaaaatt cgaggccaag aaacaacgca 961 tgatggaatc cagtttagcc tttcaagagg aattgaagcg tcactgcaaa cctgctgttg 1021 atgatgagac tttccagaaa atggtgcaaa agatgtatga agaaatgaaa cgtcagcgtt 1081 cctcagaaga tcctaataat gctgctgcaa ataaattacc ggctatgggt ggtccagtag 1141 ctgcaacagc tggcacaggt gtgggtgccg ctggggcacc agctgcaacc caccgcaggt 1201 gaggcgaaaa aggaagctcc acctgcaccg ctggcaccaa cgttaacatc atctacacct 1261 actataacag gtgttgtcac cattccagct atgaagccac cacatgaatc tggcagcaaa 1321 actgatccag agccaatgga cattgagcca ccagcaaaac caacagcacc tatacctcca 1381 aagccagagc caaaggtaaa tgagcaccac agcaagacca aagcacatgg tgataatgca 1441 aaagaacctg gcaaggcgaa gggatcgaaa aacacagctg tagttccacc accaccacct 1501 attgggggag caccaccacc gggtgagcag ccattagctg caacaactca acctccaaac 1561 tctgctccaa ttggaatgcc gccagctgta ggaactccct ctaatccaca tgcgcaacca 1621 cctccaccgg ctcaacatat gccaccaaca tcagttgctt cagtggctgg ccaacagcca 1681 cctcagcacc ctcctagtaa tatgccgcca atgcatccac tacatgcaca accgccacca 1741 ccaccacaac atggcgggcc agctccacca ccatctcatt tgccaccaca catgcagcca 1801 catccacagg caccacccat gggctcaatg ccaccacatg cagcatatgc ccaatatgga 1861 ccaccaccag ggggaccaac gcgttctccc tactatcaac cgcaatatgg ggcgcatccc 1921 ccaccacaac agccatatgg tcaatatccg ccatatcatt atcaacaacc ctatggacca 1981 ccaccaggtt cccactacat gaattctaga ccgccaccac aacataatgg aggggcccca 2041 cccccagggc ctcattatgc tccagaacac gttggtggtc caccacaagg tcaacctgga 2101 ggtccattgg caccaccacc acatatggcg ccacacgacg tttacggtca accgccgccc 2161 ccgcaacaac aacagccacc tccagcggga cacaatcctt tgccaccaca acaacaaccc 2221 ataccagctg caggcccacc agcatctcaa ccaccaactg acgagggacc gccaaaatca 2281 gaatcggatg agagcaaagc tgaataa