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PREDICTED: Stomoxys calcitrans uroporphyrinogen-III synthase


LOCUS       XM_013254254            1396 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106088642), mRNA.
ACCESSION   XM_013254254
VERSION     XM_013254254.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013254254.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1396
                     /gene="LOC106088642"
                     /note="uroporphyrinogen-III synthase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:106088642"
     CDS             442..1254
                     /gene="LOC106088642"
                     /codon_start=1
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="XP_013109708.1"
                     /db_xref="GeneID:106088642"
                     /translation="MNRQRTVIIFKSESESTDVYAAELKHHFFHPIFVPTLSFGFKNL
                     EKLCAKLQHPDDYEGIIFTSPRCVEAVCKALDKQELPGGWKMLRNYAVGEVTHNMVHD
                     HLQQLFTHGKQTGNARALAEFIIEAFEGDKDKPLLIPCSNLAQDTLTVMLKEDGFRID
                     ACEVYETKCSPDLSEKMDEALKAENIEFLAFFSPSGVNCASEYFKAKNIPMDKYRLVA
                     IGPSTRRALENKGLKVYCTAERPTVEHLIKVLINPQESRENLLKESQHSLQE"
     misc_feature    order(472..474,631..639,724..726,862..864,934..936,
                     940..942,1015..1029)
                     /gene="LOC106088642"
                     /note="active site"
                     /db_xref="CDD:119440"
     misc_feature    496..1185
                     /gene="LOC106088642"
                     /note="Uroporphyrinogen-III synthase HemD; Region: HEM4;
                     pfam02602"
                     /db_xref="CDD:426866"
     polyA_site      1396
                     /gene="LOC106088642"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacgtatatc tactaccgat aactctgtat ctttcccgct gcattagcaa tactgatgca
       61 atgcataaat gctaccaaaa ataaacattg caaacaaatg cgacagaccc gaggaaataa
      121 atagattaac cacacggtca aagccataca aaccactagc aactaccgtt tacaacgaca
      181 agggaaacga atcggaaaac atctgtttgc atttctctag agtggcaatg gccagctaag
      241 taatatagaa gatcacccac ctaactaact aaactataag tatgtgctaa tttgatgatc
      301 gatcgccgac ccacaaagtg caagagagaa gagagttccg tcgacgtcaa tcatcccacc
      361 acaacaaact gtaagtaata taaacgttgg attgcttgac tagtttcttc tgttgtgttg
      421 tgtagtaagt attatcatag aatgaatcgc caacgtactg tcattatttt caaatcagaa
      481 tcggaaagta ccgatgtcta cgctgcggaa ctaaagcatc acttctttca tccgatattc
      541 gtgcctacgt taagttttgg ctttaagaac cttgagaaat tgtgcgccaa gctccagcat
      601 ccagatgatt atgagggtat catcttcact agcccccgct gtgtggaggc cgtctgcaag
      661 gccttggata aacaagagct gccgggaggt tggaaaatgt tgcgtaatta tgcagttggt
      721 gaagtcacgc ataacatggt gcacgaccat ttacaacaac tattcacgca tggcaaacaa
      781 acgggaaatg ctcgtgctct agccgaattt ataatcgagg cctttgaggg ggacaaagac
      841 aaacctctgc tgataccatg cagcaattta gcccaggata ctttaactgt aatgcttaaa
      901 gaggatggct ttcgcataga cgcctgtgag gtatacgaaa caaaatgtag tcccgattta
      961 agcgaaaaaa tggacgaagc ccttaaggcg gagaacatcg aatttttggc tttcttctct
     1021 ccctcgggtg tgaattgtgc ctctgagtat ttcaaagcta aaaatattcc catggacaaa
     1081 taccgtttgg ttgccattgg gccaagtaca cgtcgtgcct tagagaataa aggccttaaa
     1141 gtttattgca cagcagagcg tccaacggtg gagcatttga taaaggtttt gattaaccca
     1201 caagagagta gagaaaatct attaaaggaa tcacagcatt cactgcaaga gtgaagcgaa
     1261 agtctgccaa ataacacata gaattttggt tcaataggat tggacaaaag acaaaattta
     1321 ttataagaat cacccaaatt gttgtaattt aattattatt tttttttaat aaattattta
     1381 gaaattaaaa tgaaaa