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LOCUS XM_013254139 4693 bp mRNA linear INV 02-SEP-2023 (LOC106088561), mRNA. ACCESSION XM_013254139 VERSION XM_013254139.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013254139.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4693 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4693 /gene="LOC106088561" /note="3'-5' RNA helicase YTHDC2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106088561" CDS 177..3614 /gene="LOC106088561" /codon_start=1 /product="3'-5' RNA helicase YTHDC2" /protein_id="XP_013109593.2" /db_xref="GeneID:106088561" /translation="MSTNTAGKRRQKAGGRHNDASTTATGQNNHRGKVERVNLPENER LPLQAKISEFLASSEDEIVLKGLSSIHRKYLHQYAAKRGLKSKSYGSTSNRELHIIKR KRLTALGDVKVLNITPATRATLQSLMPAIQSQLVTNQALLQPNSHHTHKGLRNESLSV SLGPRMIPPRPQRISKELCRDKQELPIYQYQAELHQMLEQHNVFIVNGETGSGKTTQV PQYILNDATRRSRPCRIVVTQPRRVAAVSVAHRVAEERGEPLGESVGYQIRMESRVKR TSNLIYTTSGCFLRSLMSDVRDLFRKVSHLIIDEIHERDKNTDFTLITIKEQLKMNKD LKVILMSATMDIQLLSKYFDNCPVLNVPGQGYDVKIYHLEDILYHTGYRTALMEKYLR SMNDNFPLPSTMFDDNILESGQRQTAVRLEDKYLQQLLDTLIEQCCDNMETKTREELH EMFDQIQYYIESEGMNINAGHSESGITALMAGCKCNMPDFVQFAIQRQANVLIRDNDG YEAIDYARLHQDGICLQIVMSSSHSAERTKQQAELSQQDKEKQKVLLAYQQQFNDDNE VDHDLILSLLEGLYRSAHPGAIMVFLPGYNDIVQQRNLIQSTLPGGTYKLCILHGQMD SKDQFEALQQHPVRKIILSTNIGQTSITIPDLAYIIDSGKVKMNTYDSITESSQLQSI WISQADACQRSGRAGRTQNGVCYRLYSLAKYQFMPQFSIPEFMRIPLTEICLYAKTLE PKCEVQHYLQKSLNPPSSFSIQNALRKLKILGVFRDDESVTELGKHLVDIPLDVQLGK CLMYGVFLKCYDPILTICSYHSVKDPFILPTDRSAQGQASFQRKSFAGQSFSDQMGIL SLYKSYLEIRHNPRKVRDFCNKYFLSHSAMEMFCATRKQINDVMKNKFNINYMDKMFN NDWHMIQLCLVAGFYPNVALIDRKGHKLICGAEKQLILQRSSALNPPGKKHLKEFINQ MPHDWIVFYEKSRISNTCTINMNTVVPSIMIALQCGRDCEVINNGGLDDSDEEDDDDG NEDNDTDSDTSDKSLDTPVPTNDFEALQLKLAKTLENISLSNANNRSVLSLDNWIKFE LTSSDAKLLLLLRIALHTQFMAFLRTGPNSNTSNVAYCLQKLLHSLNSSAPSLKFSV" ORIGIN 1 agaagaagaa gaacatgaag aagaagcacg gaaataaaat cggaaataat aataagagca 61 aataattatt ttaaaattta ttaaatctaa ataaaatata atttgtgtcc ccatagtgta 121 caagaatagg aagggataaa aatcgtacaa gttgtattgt tattacatac gctccaatgt 181 caactaacac tgcgggtaaa cgtcgacaaa aagcaggtgg taggcataat gatgcctcca 241 ctacggccac tggccagaac aaccatcgtg gcaaggtgga gcgggtcaat ctacccgaaa 301 acgaacgttt accattacag gcgaaaattt ccgagttcct tgctagcagc gaggatgaga 361 ttgtcctcaa aggtctgagc agcatacatc gcaaatacct acatcaatat gctgcaaaaa 421 gaggtctaaa gagtaaaagt tacggctcca ctagtaatcg tgagctgcac ataattaagc 481 gcaaacgctt gacagctctg ggagatgtga aagtgctaaa tataacacca gcaaccaggg 541 ctacactgca aagcctcatg ccggctatac agtcgcagtt ggtcacaaat caggctctac 601 tacaacctaa ctctcatcac acacataagg gcctaagaaa tgaatctttg tctgtatctc 661 tgggaccacg catgattcca ccaagaccgc aacgtatcag taaggaattg tgtcgagata 721 agcaagaact gccgatatat caataccagg cggagttgca tcaaatgtta gagcagcata 781 atgttttcat agttaacgga gaaactggtt cgggtaagac aacccaagtt cctcagtata 841 tattaaacga tgccacaaga cgtagtcgac catgccgcat agtggtaaca cagccaagaa 901 gagttgccgc cgtctctgtg gcccatcgag tggctgagga aagaggtgag ccgctgggtg 961 aaagtgtggg ctatcaaata cgcatggaga gtcgtgtaaa gagaacttca aatttaatat 1021 ataccacatc gggctgtttt ttaagatccc ttatgtccga tgtacgcgat ctcttccgta 1081 aggtgtccca tttgataatt gatgaaattc acgaacgtga caaaaacacc gatttcacat 1141 tgatcaccat caaagaacaa ttgaaaatga ataaagatct caaggttatt cttatgtctg 1201 ccaccatgga tattcaattg ttatcgaaat atttcgataa ctgcccagta ttaaatgttc 1261 ccggacaagg ctacgatgtc aaaatttatc atttggaaga tatactctat catacgggct 1321 atcgcactgc tttgatggag aaatatttac gctcaatgaa tgataacttc cccttgccct 1381 ccaccatgtt tgatgataac atacttgagt cgggccaaag acaaacagct gtgcgtttgg 1441 aggataaata cttgcagcaa ctcttggata ctctcataga gcagtgctgc gacaatatgg 1501 aaactaaaac gcgcgaagag ctacatgaaa tgttcgatca aatccagtac tatattgaaa 1561 gcgagggtat gaatataaat gccggtcact cggagagcgg tataaccgcc ttaatggctg 1621 gctgtaaatg caatatgcct gactttgtac aattcgcaat tcagaggcaa gccaacgttt 1681 tgatacgcga taatgatggc tatgaggcaa ttgattatgc tcgcctgcat caagacggca 1741 tttgtttgca aattgttatg agttcatcac acagtgcgga aaggacgaaa caacaggcgg 1801 agctgagtca gcaggacaag gagaagcaga aagtcctctt ggcttaccag caacagttta 1861 acgatgacaa tgaagtagat cacgatttga ttttgtccct gctcgaaggt ctgtaccgca 1921 gtgctcatcc gggagcaata atggtattct tgcccggtta taatgacatt gtgcaacaga 1981 gaaatttgat acaaagcact ttgcctggag gcacttacaa actttgtata ctacatggcc 2041 aaatggactc gaaagatcaa tttgaagccc ttcagcagca tcccgttagg aagattatat 2101 tgtccaccaa cattggtcag acgtctataa caatacccga cttggcctac atcatagact 2161 cgggtaaggt taagatgaac acttatgact ccataacaga gtcctcacaa ctccaatcaa 2221 tatggatttc tcaagctgat gcttgccaac gatctggcag ggccggacgt acacagaacg 2281 gagtttgtta tcgtttgtac tccctggcca agtatcaatt tatgccacag tttagcatac 2341 cggaatttat gcgcataccg ctgacggaaa tatgcctgta tgcaaagact ttggagccaa 2401 aatgtgaagt tcaacattac ttgcagaagt cattgaatcc accctcaagc tttagtattc 2461 aaaatgcctt gagaaaactg aaaatactgg gagtttttcg cgatgacgag tcggtaacag 2521 agttgggtaa acatctggtg gatataccac ttgacgtgca attgggcaaa tgtctgatgt 2581 atggagtgtt ccttaaatgc tatgatccca tattgaccat ttgttcgtat cactcggtaa 2641 aggatccctt tatcttgccc acagataggt cggctcaagg gcaggcctcc ttccaacgca 2701 agtcctttgc aggccaatcc tttagcgatc aaatgggcat cctgtcgctg tacaagtcct 2761 atttagaaat tcgccacaat cctcgcaagg tgagagactt ttgcaacaaa tatttccttt 2821 cccattcggc catggaaatg ttttgtgcca cacgcaagca gataaacgat gtcatgaaga 2881 acaaattcaa catcaattac atggataaaa tgttcaacaa cgattggcat atgatacaat 2941 tatgtctggt ggctggcttc tatccgaatg tggcattgat agaccgtaag ggccacaagc 3001 tcatatgtgg cgctgagaag cagttgattt tgcaaagatc ttcagccctt aatccaccgg 3061 gcaagaaaca cctaaaagaa ttcatcaatc aaatgcctca cgattggatt gtcttttatg 3121 aaaaatccag aatttccaac acctgcacca tcaacatgaa tacggttgtt ccttccatca 3181 tgatagcctt gcaatgtggg cgtgactgcg aggttatcaa caacggcggc ttagacgata 3241 gcgatgagga ggacgacgat gatggcaacg aagacaatga cacagattcc gatacatctg 3301 acaaatccct cgatacacct gtacctacca atgatttcga agctttgcaa ttgaaattgg 3361 ccaagacatt ggaaaacata tctcttagta atgccaataa cagatccgta ttgtccctgg 3421 acaattggat aaaattcgag ctgacatcca gcgatgccaa actgctgttg cttctgcgca 3481 tagcactgca cacgcaattc atggcattct taaggactgg acccaactcg aatacatcaa 3541 acgtagccta ttgtttgcaa aagctattgc attctctgaa cagcagcgcc ccatccctga 3601 aattctcagt ttaactgcgg tatttctcaa gacctaaaca agaaaagccg gggctgctgg 3661 ccctttcgtt gctacgccta ggactttaaa taagttttgt tttcctttcc aaagcacaac 3721 tttatatgct tgtatttgtt aatatcgttt tcatttcggt agtgttttaa gtagttttaa 3781 atgaataatg aaaagatggg ataaccatac ataaaatcct tcccacacgt atgcatagct 3841 atattaactg gatcaaagtt aattttgatt tggtatgaga ttaagaattg agtgacacac 3901 atatacacac acaaacacac ctacatttat acttctacaa atatgcatat ttattttaga 3961 taacctttag tattggagtt aaggtaatga tttaaaaaaa tataaaaacc aaatggtttt 4021 atacgaaaag tatcactatt tgatttggca ctgaaagttt tgaccattga gctgagagct 4081 gtaagaatag cattccaact cggtcgccat tttcagacac acaagaaaaa catcgtgtgc 4141 agcacactcc ccataagata cacacacaca cacacagaat ttctcacata aaacacaact 4201 tttagaaaaa acaaaagtaa aaatgtatta tggaagattt tatgcattaa aagttataac 4261 cgaaatcttt gtgtaacatg ttaagaaaat atgctgaatt gcaaatattt cgcctatgtt 4321 ttatgacatt ccaaaattct attcaattcg aaagtggtta ttttttgctt gtttttgttg 4381 ctatttttgc gcgaaatgaa aatatttatt tcttaaataa aattaaacga caaatacttt 4441 taactaatat ccatttgagt attaaagcgt gtgaaaatga ttttattaca tgtacgaata 4501 tcattgttag aacacgcgct gcgccgcata ctacatgtaa agtatgctta tatataagtg 4561 acatgcatac atacacagaa tatttattca gatctaaatg cttgatatac atttgattat 4621 ttctagtaag acttaagtga aagttatata aaacaacatt gaaatcatat ttccaataaa 4681 ttcatacatt tta