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LOCUS XM_013254138 6186 bp mRNA linear INV 02-SEP-2023 (LOC106088560), transcript variant X1, mRNA. ACCESSION XM_013254138 VERSION XM_013254138.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013254138.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6186 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6186 /gene="LOC106088560" /note="uncharacterized LOC106088560; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106088560" CDS 542..5656 /gene="LOC106088560" /codon_start=1 /product="uncharacterized protein LOC106088560" /protein_id="XP_013109592.2" /db_xref="GeneID:106088560" /translation="MSQEDTTTKYQNNHYQYNNYNAATNNNTMKYENKRSLTTTTTLK TMATTTATATTPVALYENFIPLANSNNNKYPTDSTLDCEPNKSAPFIDVQRFVHQTTN AFNGRPNDDYSLNQTPEYYVDNRDRQEIVPNYENFSFKHHLELDKKVLLQKYFRTALV GPRTNIYENLCRGCNYGVFTARGPLCSFCECIVNGVHSISASPTESSNNIYENICEQC AQFYSGNEEDCLCRKELEVISEQSHDKKQVKPKETSENLKSVLKTGRSEENLLSEKKK VKISKSLSFGKNSKPKKLSSFWETLRKNKVPTRKPLEIVHNVGGYDQVFHTKESFDLQ RICELKRSATSCSDQHIYGRLKPRDLDLVKSQEDFLSTQSLTQNERGGHGGGKKRRIS KVKFLRSISSNIQEPPELSEKLSKSISSSLTAASATSTSDILQAVYLNNSVCHWMSAL RHNLNSSSPSVNTCTLRVSDEECDCLCYPKSIPAKKLLPINPNSCKVLAPVVTNKENI LKQSTKLAQSFPLTSSLSNHNEQEEDSLTDTDTDEIEAQRRHTVIQKDSLEDTKEDNQ HQSYLATATLEDHYQQMVNEFKIQLVNKQVKQQQQQHYLQPRLAYNEQIVNKHISMAS AGVNGGNSLTCTNNNNKNGNTISKSNNIDIPLRQAVNSNHNKAKRQGMYLRLTEHDNL PTAANLDSHQTQVILPEREVPQKDHSNKQNESKSGCESQPAKPSLNSTNLESNTVNEA NLNSSLRKESPNVYAKELLTATETPTKRSGVHEGDVLRAFEALLRQERERQQQSNALS DLGETEVEKESQTNSDSLEITTTSQHWNDHTKAGLLQPFGKSGGDKEERNIWTTTMPV FDLLQLIKYLQLSSSLNRVAIHYNNNEKQLFVFLQYISHNGEKYKHATHGQLMRKYQR FLVYQHNSHRHLHNESRAATLPSITAAPLEHSLPTKAANSVDLKLDLMKTNGNIYGRI KVRPSADGGDRGGELAYNKNNNNEDNNDSCECQSEAASGAKLSEIPTVKQIISEYNNN NTNNNNHKKMKKPPEVPKRNPNTKLSPSTELLPPIPLQRTKLSPSTPNSQPIANETKS QEGVRKKDDLESIYQPIWKFKTVGEAQERFKTDEDYYTLKDLQAEEYPAMLNAKSGEI LAAALVPEIFIHEEEEDHSEWEPDEEFVFTTTTTNLDQQPRDTVAAHVRRTESLNSSS IHAHQGHDRNGTLRSYLSNNSSLGSSSLSGSTITDFASSTATLASMASSSLRHHLFRN VGIFYSLTDKNLCAIVYDYDRIHAWKYFAKKPINHSNDDAAAVVASSFVIISHDDTIN DSGLGKSPTPSAMPHRPKQSPVPVRHQPANGGNSPKCSSESVTTPAKVPQNDQISSAP IANPASLMASIDLVVLAWKHQLLNVNYMEDEEDMIVSKSEISQANKIKENEEPQQFTQ RFKSRSTDNILDLPLDDEKKTITERMRSRLQRGILNLNTRSSPKSEKKTYKALRNSQT TSLYLEDGLKPKHPIFGAPLDQLELNRTTNVPRFVADSIEYIERKDRIVQDGLYRACG NKFSIDELKQKLTKSYIYDPKLITADDIHTITSLLKLFFRELPQPLIPQETYTRLARD LLKMQDGIDTFRIAINDMPEPNRSTLAFLMKHLTNVAACSASNRMNASNLAIVWGPSL FALNEDKTYDIGRMNSLAKALIENYNRIFHINERLL" polyA_site 6186 /gene="LOC106088560" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctttaagtac gcgcgcctag aaagtgtttt gcatcttcaa gctcgttcag ttgtttttca 61 atttgcaaac taaacgcgtc gtcgcaagct ccaagcataa cgagactttt acaatcgcgg 121 cgggcgatct gtctgtctgt gtcgccacca aaaagaatat caaaccccta ttagttgtca 181 aaaatatata aattgagaat ttgaaaaagt tgaaaaaaaa cgagaagaga cattcgttta 241 attaaaacct aaaaaaagag agaagttcaa atgtctttta aataaatcat aataaaccga 301 aaaaaagaaa aaccccaaac aaaacgaaca aaaaatagcg ataacaacaa taaccaccag 361 aagacgtcat agtggaggag acttcgtagc attaagagct aagctaactg aggataagat 421 ggtgagagag agtgtgaatg agaagtaaaa aaaccccaaa ccacaagcac aagtaaatga 481 ctctcgacaa atgccgagat atatcaacaa acaacaacag caataagaat aagaaataaa 541 catgagtcaa gaagatacaa caaccaaata ccaaaataac cactaccaat ataacaacta 601 caacgctgcc accaacaaca atactatgaa atatgaaaac aaacgatcac tgactaccac 661 aacaacgctg aaaacgatgg cgacgacgac agcgacagcg actactcctg ttgctcttta 721 cgagaatttc attccccttg ctaacagcaa caacaacaaa taccccaccg actctacgct 781 tgactgtgag cccaacaaga gcgccccatt tattgatgta caacgattcg tacaccaaac 841 aacgaacgct tttaacggtc gccccaacga cgattattct cttaaccaaa cgcccgaata 901 ttacgtcgac aatagagata gacaagaaat tgtgcccaat tacgaaaatt ttagttttaa 961 gcatcacctt gagctggaca agaaagtgtt gttgcaaaag tacttccgca ccgctttagt 1021 cggtccacgc accaatattt acgaaaattt gtgtcgcggt tgcaattacg gggtattcac 1081 ggctcgcggt ccattgtgca gtttttgtga gtgcattgta aacggtgtcc atagcataag 1141 tgcctccccc accgaaagtt cgaataatat ttacgagaat atctgtgaac agtgtgctca 1201 attttatagt ggcaacgaag aggattgcct ttgccgaaaa gagttggaag taatttcgga 1261 acaatcccac gataaaaaac aagtgaaacc gaaagaaaca agtgaaaacc taaagagtgt 1321 tctgaaaacc ggaagaagcg aggaaaacct tttgagtgaa aagaaaaaag tgaagatatc 1381 caagtctttg tcgtttggca aaaactcaaa acctaagaaa ctgtctagtt tttgggagac 1441 tttaaggaag aataaagtcc ccacgcgtaa gcccttggaa attgtccaca acgtgggagg 1501 atacgaccaa gtctttcata ccaaggagtc atttgattta cagcgcatat gtgaattgaa 1561 gcgaagtgcc accagctgca gtgatcagca tatttatgga cgtttaaagc ctagggattt 1621 agatttggtg aagtctcaag aagattttct ctccacgcaa agtttgacgc aaaacgaacg 1681 aggaggacac ggaggaggca aaaagaggcg tatttcaaaa gtaaaatttt taagatccat 1741 ttcttcgaac attcaagaac cgccagaact atcggagaaa cttagtaagt ccatatcctc 1801 cagtctaaca gccgcctccg ccacatccac gtcggatatt ttacaagcgg tctatttgaa 1861 taacagtgtt tgtcattgga tgtcagcatt acgtcataat ttgaacagca gctctccctc 1921 tgtcaatact tgtaccttga gagtaagcga tgaggagtgc gattgtctgt gttatcccaa 1981 aagcataccg gcaaaaaaac tactaccgat aaatcccaat tcatgtaagg tgctggcgcc 2041 agtggtgact aataaagaaa atattttaaa acaatcgact aagttggccc aatcatttcc 2101 actcacttca tcattatcaa accacaacga acaggaagaa gattcgttaa cggacacaga 2161 tactgacgaa atagaagcac agagacgaca caccgttata caaaaggatt ccttggaaga 2221 tacaaaggaa gataatcagc accaaagtta tttagctaca gcaaccttgg aagatcatta 2281 tcagcaaatg gtaaatgaat ttaagattca gttggtaaac aagcaagtga aacagcaaca 2341 acaacaacat tatctacaac cacgtctggc atataatgaa caaattgtaa acaaacatat 2401 cagcatggcc tcagcaggtg ttaatggtgg caatagcctt acctgtacca acaacaacaa 2461 caaaaatggc aacactattt ccaaatcgaa taatattgac atacctctac gtcaagccgt 2521 caactctaat cataataaag ccaaacgcca aggcatgtac ctgcgcttaa ctgagcacga 2581 caatttgcca actgccgcaa accttgacag ccaccaaact caggtgattt tacccgagag 2641 agaagtgcct caaaaagacc actcaaacaa acaaaacgag agtaagagtg gctgtgagag 2701 tcagcctgcc aagccaagtt taaatagcac aaacctcgaa tcgaataccg ttaacgaagc 2761 caacttaaac tctagcttga ggaaagagag ccccaatgtg tatgcgaaag aactgctgac 2821 tgcaactgag acgccaacaa aacgcagtgg tgtacacgaa ggtgatgtac tgcgggcatt 2881 tgaagctctg cttcggcaag aaagagaacg acaacaacaa agcaatgcct tgagcgatct 2941 tggggaaacg gaagttgaaa aagaatctca aaccaatagc gactcgttgg agattaccac 3001 cacctcccaa cactggaatg accatacgaa agcagggcta ctgcaaccat ttggtaaaag 3061 tggtggtgat aaggaggaac gcaacatatg gacaacgacg atgcccgtat ttgatctgtt 3121 gcagcttatc aaatatctac agctctcatc tagtctaaat agggtcgcca tacactataa 3181 caacaatgaa aagcagttgt ttgtttttct acagtatatc tctcacaacg gtgagaaata 3241 taaacatgca acacatggtc agttgatgag aaagtatcaa cgttttctcg tttatcaaca 3301 taatagtcat cgtcatctgc acaacgagtc gagagcagcg acgttgccgt ccataacggc 3361 agcgccgctt gaacactcat tgcccacgaa agcggcgaac agtgttgatt tgaagcttga 3421 cttgatgaaa acaaacggga acatatacgg ccgcattaaa gtacggccca gtgccgatgg 3481 cggtgatcgt ggtggtgaat tagcctacaa taaaaataat aataacgaag ataataatga 3541 ctcatgtgaa tgccaaagcg aagcggcaag tggtgctaaa ttaagtgaaa tcccaacagt 3601 gaaacaaata atcagtgaat acaataataa taatacgaac aacaacaacc acaaaaaaat 3661 gaaaaaacct ccggaggtgc ctaaacgaaa tcccaatacc aaattatcac cctcaacgga 3721 acttttaccc cccattccct tgcaaagaac caaactgtcc ccatccaccc ccaacagcca 3781 acccattgcg aatgaaacta aaagccaaga aggtgttcgc aaaaaagacg atctcgaaag 3841 tatatatcaa cccatttgga aattcaagac ggtcggagaa gcccaagaac gtttcaaaac 3901 cgacgaggat tactatacac tgaaagatct gcaggctgaa gaataccccg caatgcttaa 3961 tgcaaaatca ggggagattt tggccgctgc cttggtgccg gaaattttca tacacgaaga 4021 ggaagaagat cacagtgaat gggaaccaga tgaagaattt gtttttacca ccaccacaac 4081 aaatttggac cagcaaccac gagacacggt tgctgcccat gtacgcagga cggaatcgct 4141 taacagcagc agcatccacg cccaccaagg acatgatcgc aatggcacct tacgctcgta 4201 tcttagcaat aatagctcat tgggctccag ttccctcagt ggcagtacca taaccgattt 4261 cgccagtagc actgccacct tggcctcgat ggccagttct agtctcaggc atcacctctt 4321 tcgtaatgtg ggcatattct acagcctcac agataagaat ctatgcgcaa ttgtctacga 4381 ttacgatcgc attcatgcat ggaaatattt tgccaaaaaa ccaataaacc acagcaatga 4441 tgatgctgcc gctgtcgtcg catcttcctt tgtcattatc tcccatgatg acaccatcaa 4501 tgacagcggc cttggcaaat cgcccacacc ttcggcaatg ccgcatcgtc ccaaacaatc 4561 accagttcct gttcgtcatc aaccagcgaa tgggggaaat tcccccaagt gcagcagtga 4621 aagtgttaca acgccggcga aagtgccaca gaatgatcaa atcagcagcg cccccattgc 4681 aaatccagcc tcactcatgg cctccattga tttggtggtg ctggcatgga agcatcagtt 4741 gctaaatgta aattacatgg aggatgaaga agatatgatt gtttcaaaat cagaaatcag 4801 ccaagcaaat aagatcaagg agaatgaaga accccaacaa tttactcaac gttttaagag 4861 ccgatcgaca gataatattt tggatttacc tctggacgat gagaaaaaga ctataaccga 4921 acggatgcgt agtcgattgc aacgaggaat cttaaatctc aataccagaa gttccccgaa 4981 aagtgaaaag aaaacctata aggccctacg caattcccaa acgacaagtc tctatttgga 5041 agatggcctc aaaccgaagc atcccatttt cggtgcccca ctcgatcagc tggaactgaa 5101 ccgtaccaca aatgtaccac gatttgtggc cgactccatc gaatacatcg aacgcaagga 5161 tcgcattgtc caggatggtc tttaccgagc gtgcggcaat aaattctcca tagatgaact 5221 aaaacaaaaa ctaaccaaat cctatatcta cgatccgaaa ctaataaccg ccgatgatat 5281 tcacacaata accagtctgc tgaaactatt cttccgtgaa ctaccccaac cgctgatacc 5341 gcaagagacg tacactcgtc tggccagaga tttgctgaaa atgcaagacg gcatcgatac 5401 ttttcgaata gcgataaatg atatgccaga accgaataga tccacgctgg catttctaat 5461 gaaacattta acgaatgtcg cagcctgtag tgcctccaat cgcatgaacg cttccaattt 5521 agctattgtt tggggtccct cattattcgc cttgaacgag gacaaaacct acgatatagg 5581 acgcatgaat tccctagcca aagcgttaat cgaaaattat aatcgaattt ttcacataaa 5641 tgaacgtttg ctataggcta taaccagttg ttcataattt atagatatgt gtactttttt 5701 tgacataaca ttgactattt gtgtaaatta tttattatta ttgcgccttc ccttccgaaa 5761 ttgtcctcct gaaaacaaag ctttactcat tagattttag tgttagacca gcaactcaaa 5821 gcctgcaaaa tcatggtgct taaggacatc atggtggaat attgaaatga aacatcacaa 5881 tgcccattat actcttacat gcccacacaa aaataaaatc gtacttttaa caactatcac 5941 aacataccaa atattttttt gtttgtttca aaaaaagaca ttcatgtttt acataattaa 6001 taacttttta tattaagtgc gtatatactt tacaaaaata ataggaatag tgtgaatttt 6061 ccaaacgact ttagttaaat gcaaagtaaa gaagtttttc ttaatctacc gcctgaagtt 6121 agggaaaact gtagtttgta gtcaattatt gttatcattg atttttaaat aaaaattcaa 6181 aagtaa