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LOCUS XM_013254137 6338 bp mRNA linear INV 02-SEP-2023 (LOC106088560), transcript variant X2, mRNA. ACCESSION XM_013254137 VERSION XM_013254137.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013254137.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6338 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6338 /gene="LOC106088560" /note="uncharacterized LOC106088560; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106088560" CDS 694..5808 /gene="LOC106088560" /codon_start=1 /product="uncharacterized protein LOC106088560" /protein_id="XP_013109591.2" /db_xref="GeneID:106088560" /translation="MSQEDTTTKYQNNHYQYNNYNAATNNNTMKYENKRSLTTTTTLK TMATTTATATTPVALYENFIPLANSNNNKYPTDSTLDCEPNKSAPFIDVQRFVHQTTN AFNGRPNDDYSLNQTPEYYVDNRDRQEIVPNYENFSFKHHLELDKKVLLQKYFRTALV GPRTNIYENLCRGCNYGVFTARGPLCSFCECIVNGVHSISASPTESSNNIYENICEQC AQFYSGNEEDCLCRKELEVISEQSHDKKQVKPKETSENLKSVLKTGRSEENLLSEKKK VKISKSLSFGKNSKPKKLSSFWETLRKNKVPTRKPLEIVHNVGGYDQVFHTKESFDLQ RICELKRSATSCSDQHIYGRLKPRDLDLVKSQEDFLSTQSLTQNERGGHGGGKKRRIS KVKFLRSISSNIQEPPELSEKLSKSISSSLTAASATSTSDILQAVYLNNSVCHWMSAL RHNLNSSSPSVNTCTLRVSDEECDCLCYPKSIPAKKLLPINPNSCKVLAPVVTNKENI LKQSTKLAQSFPLTSSLSNHNEQEEDSLTDTDTDEIEAQRRHTVIQKDSLEDTKEDNQ HQSYLATATLEDHYQQMVNEFKIQLVNKQVKQQQQQHYLQPRLAYNEQIVNKHISMAS AGVNGGNSLTCTNNNNKNGNTISKSNNIDIPLRQAVNSNHNKAKRQGMYLRLTEHDNL PTAANLDSHQTQVILPEREVPQKDHSNKQNESKSGCESQPAKPSLNSTNLESNTVNEA NLNSSLRKESPNVYAKELLTATETPTKRSGVHEGDVLRAFEALLRQERERQQQSNALS DLGETEVEKESQTNSDSLEITTTSQHWNDHTKAGLLQPFGKSGGDKEERNIWTTTMPV FDLLQLIKYLQLSSSLNRVAIHYNNNEKQLFVFLQYISHNGEKYKHATHGQLMRKYQR FLVYQHNSHRHLHNESRAATLPSITAAPLEHSLPTKAANSVDLKLDLMKTNGNIYGRI KVRPSADGGDRGGELAYNKNNNNEDNNDSCECQSEAASGAKLSEIPTVKQIISEYNNN NTNNNNHKKMKKPPEVPKRNPNTKLSPSTELLPPIPLQRTKLSPSTPNSQPIANETKS QEGVRKKDDLESIYQPIWKFKTVGEAQERFKTDEDYYTLKDLQAEEYPAMLNAKSGEI LAAALVPEIFIHEEEEDHSEWEPDEEFVFTTTTTNLDQQPRDTVAAHVRRTESLNSSS IHAHQGHDRNGTLRSYLSNNSSLGSSSLSGSTITDFASSTATLASMASSSLRHHLFRN VGIFYSLTDKNLCAIVYDYDRIHAWKYFAKKPINHSNDDAAAVVASSFVIISHDDTIN DSGLGKSPTPSAMPHRPKQSPVPVRHQPANGGNSPKCSSESVTTPAKVPQNDQISSAP IANPASLMASIDLVVLAWKHQLLNVNYMEDEEDMIVSKSEISQANKIKENEEPQQFTQ RFKSRSTDNILDLPLDDEKKTITERMRSRLQRGILNLNTRSSPKSEKKTYKALRNSQT TSLYLEDGLKPKHPIFGAPLDQLELNRTTNVPRFVADSIEYIERKDRIVQDGLYRACG NKFSIDELKQKLTKSYIYDPKLITADDIHTITSLLKLFFRELPQPLIPQETYTRLARD LLKMQDGIDTFRIAINDMPEPNRSTLAFLMKHLTNVAACSASNRMNASNLAIVWGPSL FALNEDKTYDIGRMNSLAKALIENYNRIFHINERLL" polyA_site 6338 /gene="LOC106088560" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgtaataat cgtcgttttt cctctccact atcctgagtt gaatgaattt tgtgcaatga 61 gatcaaagcc agctgattga gctattaacc aacaacaaca acaactgaaa cagcaacaaa 121 ataataattt aaaaaaaata atgcaactac aacaacgacc gcggtgaatg caaacaacca 181 tgttaacgct ctgctgaaaa tggatacgtg ttgaaattta aataacttat cggctgggct 241 ggtacactgg ccagtctcag ttcgtggaga atgccgcgca gtgcgaacaa tttcaaaatt 301 acagcggttt tttaaagttc ttttggggaa tcaatgccct gagacgcatc aagaaaataa 361 gttgaaaaaa aacgagaaga gacattcgtt taattaaaac ctaaaaaaag agagaagttc 421 aaatgtcttt taaataaatc ataataaacc gaaaaaaaga aaaaccccaa acaaaacgaa 481 caaaaaatag cgataacaac aataaccacc agaagacgtc atagtggagg agacttcgta 541 gcattaagag ctaagctaac tgaggataag atggtgagag agagtgtgaa tgagaagtaa 601 aaaaacccca aaccacaagc acaagtaaat gactctcgac aaatgccgag atatatcaac 661 aaacaacaac agcaataaga ataagaaata aacatgagtc aagaagatac aacaaccaaa 721 taccaaaata accactacca atataacaac tacaacgctg ccaccaacaa caatactatg 781 aaatatgaaa acaaacgatc actgactacc acaacaacgc tgaaaacgat ggcgacgacg 841 acagcgacag cgactactcc tgttgctctt tacgagaatt tcattcccct tgctaacagc 901 aacaacaaca aataccccac cgactctacg cttgactgtg agcccaacaa gagcgcccca 961 tttattgatg tacaacgatt cgtacaccaa acaacgaacg cttttaacgg tcgccccaac 1021 gacgattatt ctcttaacca aacgcccgaa tattacgtcg acaatagaga tagacaagaa 1081 attgtgccca attacgaaaa ttttagtttt aagcatcacc ttgagctgga caagaaagtg 1141 ttgttgcaaa agtacttccg caccgcttta gtcggtccac gcaccaatat ttacgaaaat 1201 ttgtgtcgcg gttgcaatta cggggtattc acggctcgcg gtccattgtg cagtttttgt 1261 gagtgcattg taaacggtgt ccatagcata agtgcctccc ccaccgaaag ttcgaataat 1321 atttacgaga atatctgtga acagtgtgct caattttata gtggcaacga agaggattgc 1381 ctttgccgaa aagagttgga agtaatttcg gaacaatccc acgataaaaa acaagtgaaa 1441 ccgaaagaaa caagtgaaaa cctaaagagt gttctgaaaa ccggaagaag cgaggaaaac 1501 cttttgagtg aaaagaaaaa agtgaagata tccaagtctt tgtcgtttgg caaaaactca 1561 aaacctaaga aactgtctag tttttgggag actttaagga agaataaagt ccccacgcgt 1621 aagcccttgg aaattgtcca caacgtggga ggatacgacc aagtctttca taccaaggag 1681 tcatttgatt tacagcgcat atgtgaattg aagcgaagtg ccaccagctg cagtgatcag 1741 catatttatg gacgtttaaa gcctagggat ttagatttgg tgaagtctca agaagatttt 1801 ctctccacgc aaagtttgac gcaaaacgaa cgaggaggac acggaggagg caaaaagagg 1861 cgtatttcaa aagtaaaatt tttaagatcc atttcttcga acattcaaga accgccagaa 1921 ctatcggaga aacttagtaa gtccatatcc tccagtctaa cagccgcctc cgccacatcc 1981 acgtcggata ttttacaagc ggtctatttg aataacagtg tttgtcattg gatgtcagca 2041 ttacgtcata atttgaacag cagctctccc tctgtcaata cttgtacctt gagagtaagc 2101 gatgaggagt gcgattgtct gtgttatccc aaaagcatac cggcaaaaaa actactaccg 2161 ataaatccca attcatgtaa ggtgctggcg ccagtggtga ctaataaaga aaatatttta 2221 aaacaatcga ctaagttggc ccaatcattt ccactcactt catcattatc aaaccacaac 2281 gaacaggaag aagattcgtt aacggacaca gatactgacg aaatagaagc acagagacga 2341 cacaccgtta tacaaaagga ttccttggaa gatacaaagg aagataatca gcaccaaagt 2401 tatttagcta cagcaacctt ggaagatcat tatcagcaaa tggtaaatga atttaagatt 2461 cagttggtaa acaagcaagt gaaacagcaa caacaacaac attatctaca accacgtctg 2521 gcatataatg aacaaattgt aaacaaacat atcagcatgg cctcagcagg tgttaatggt 2581 ggcaatagcc ttacctgtac caacaacaac aacaaaaatg gcaacactat ttccaaatcg 2641 aataatattg acatacctct acgtcaagcc gtcaactcta atcataataa agccaaacgc 2701 caaggcatgt acctgcgctt aactgagcac gacaatttgc caactgccgc aaaccttgac 2761 agccaccaaa ctcaggtgat tttacccgag agagaagtgc ctcaaaaaga ccactcaaac 2821 aaacaaaacg agagtaagag tggctgtgag agtcagcctg ccaagccaag tttaaatagc 2881 acaaacctcg aatcgaatac cgttaacgaa gccaacttaa actctagctt gaggaaagag 2941 agccccaatg tgtatgcgaa agaactgctg actgcaactg agacgccaac aaaacgcagt 3001 ggtgtacacg aaggtgatgt actgcgggca tttgaagctc tgcttcggca agaaagagaa 3061 cgacaacaac aaagcaatgc cttgagcgat cttggggaaa cggaagttga aaaagaatct 3121 caaaccaata gcgactcgtt ggagattacc accacctccc aacactggaa tgaccatacg 3181 aaagcagggc tactgcaacc atttggtaaa agtggtggtg ataaggagga acgcaacata 3241 tggacaacga cgatgcccgt atttgatctg ttgcagctta tcaaatatct acagctctca 3301 tctagtctaa atagggtcgc catacactat aacaacaatg aaaagcagtt gtttgttttt 3361 ctacagtata tctctcacaa cggtgagaaa tataaacatg caacacatgg tcagttgatg 3421 agaaagtatc aacgttttct cgtttatcaa cataatagtc atcgtcatct gcacaacgag 3481 tcgagagcag cgacgttgcc gtccataacg gcagcgccgc ttgaacactc attgcccacg 3541 aaagcggcga acagtgttga tttgaagctt gacttgatga aaacaaacgg gaacatatac 3601 ggccgcatta aagtacggcc cagtgccgat ggcggtgatc gtggtggtga attagcctac 3661 aataaaaata ataataacga agataataat gactcatgtg aatgccaaag cgaagcggca 3721 agtggtgcta aattaagtga aatcccaaca gtgaaacaaa taatcagtga atacaataat 3781 aataatacga acaacaacaa ccacaaaaaa atgaaaaaac ctccggaggt gcctaaacga 3841 aatcccaata ccaaattatc accctcaacg gaacttttac cccccattcc cttgcaaaga 3901 accaaactgt ccccatccac ccccaacagc caacccattg cgaatgaaac taaaagccaa 3961 gaaggtgttc gcaaaaaaga cgatctcgaa agtatatatc aacccatttg gaaattcaag 4021 acggtcggag aagcccaaga acgtttcaaa accgacgagg attactatac actgaaagat 4081 ctgcaggctg aagaataccc cgcaatgctt aatgcaaaat caggggagat tttggccgct 4141 gccttggtgc cggaaatttt catacacgaa gaggaagaag atcacagtga atgggaacca 4201 gatgaagaat ttgtttttac caccaccaca acaaatttgg accagcaacc acgagacacg 4261 gttgctgccc atgtacgcag gacggaatcg cttaacagca gcagcatcca cgcccaccaa 4321 ggacatgatc gcaatggcac cttacgctcg tatcttagca ataatagctc attgggctcc 4381 agttccctca gtggcagtac cataaccgat ttcgccagta gcactgccac cttggcctcg 4441 atggccagtt ctagtctcag gcatcacctc tttcgtaatg tgggcatatt ctacagcctc 4501 acagataaga atctatgcgc aattgtctac gattacgatc gcattcatgc atggaaatat 4561 tttgccaaaa aaccaataaa ccacagcaat gatgatgctg ccgctgtcgt cgcatcttcc 4621 tttgtcatta tctcccatga tgacaccatc aatgacagcg gccttggcaa atcgcccaca 4681 ccttcggcaa tgccgcatcg tcccaaacaa tcaccagttc ctgttcgtca tcaaccagcg 4741 aatgggggaa attcccccaa gtgcagcagt gaaagtgtta caacgccggc gaaagtgcca 4801 cagaatgatc aaatcagcag cgcccccatt gcaaatccag cctcactcat ggcctccatt 4861 gatttggtgg tgctggcatg gaagcatcag ttgctaaatg taaattacat ggaggatgaa 4921 gaagatatga ttgtttcaaa atcagaaatc agccaagcaa ataagatcaa ggagaatgaa 4981 gaaccccaac aatttactca acgttttaag agccgatcga cagataatat tttggattta 5041 cctctggacg atgagaaaaa gactataacc gaacggatgc gtagtcgatt gcaacgagga 5101 atcttaaatc tcaataccag aagttccccg aaaagtgaaa agaaaaccta taaggcccta 5161 cgcaattccc aaacgacaag tctctatttg gaagatggcc tcaaaccgaa gcatcccatt 5221 ttcggtgccc cactcgatca gctggaactg aaccgtacca caaatgtacc acgatttgtg 5281 gccgactcca tcgaatacat cgaacgcaag gatcgcattg tccaggatgg tctttaccga 5341 gcgtgcggca ataaattctc catagatgaa ctaaaacaaa aactaaccaa atcctatatc 5401 tacgatccga aactaataac cgccgatgat attcacacaa taaccagtct gctgaaacta 5461 ttcttccgtg aactacccca accgctgata ccgcaagaga cgtacactcg tctggccaga 5521 gatttgctga aaatgcaaga cggcatcgat acttttcgaa tagcgataaa tgatatgcca 5581 gaaccgaata gatccacgct ggcatttcta atgaaacatt taacgaatgt cgcagcctgt 5641 agtgcctcca atcgcatgaa cgcttccaat ttagctattg tttggggtcc ctcattattc 5701 gccttgaacg aggacaaaac ctacgatata ggacgcatga attccctagc caaagcgtta 5761 atcgaaaatt ataatcgaat ttttcacata aatgaacgtt tgctataggc tataaccagt 5821 tgttcataat ttatagatat gtgtactttt tttgacataa cattgactat ttgtgtaaat 5881 tatttattat tattgcgcct tcccttccga aattgtcctc ctgaaaacaa agctttactc 5941 attagatttt agtgttagac cagcaactca aagcctgcaa aatcatggtg cttaaggaca 6001 tcatggtgga atattgaaat gaaacatcac aatgcccatt atactcttac atgcccacac 6061 aaaaataaaa tcgtactttt aacaactatc acaacatacc aaatattttt ttgtttgttt 6121 caaaaaaaga cattcatgtt ttacataatt aataactttt tatattaagt gcgtatatac 6181 tttacaaaaa taataggaat agtgtgaatt ttccaaacga ctttagttaa atgcaaagta 6241 aagaagtttt tcttaatcta ccgcctgaag ttagggaaaa ctgtagtttg tagtcaatta 6301 ttgttatcat tgatttttaa ataaaaattc aaaagtaa