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LOCUS XM_013253320 3189 bp mRNA linear INV 02-SEP-2023 (LOC106088034), transcript variant X2, mRNA. ACCESSION XM_013253320 VERSION XM_013253320.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013253320.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3189 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3189 /gene="LOC106088034" /note="F-box/LRR-repeat protein 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106088034" CDS 641..2608 /gene="LOC106088034" /codon_start=1 /product="F-box/LRR-repeat protein 4" /protein_id="XP_013108774.2" /db_xref="GeneID:106088034" /translation="MSSSTEDETQENVDVHVPIKINTQQSSGMGNASDSDDYNDVAGA LVDVEGFCYADYRIEQYAHSVLDFSSQYGIDLSISYTAPNITGRPSKYPDYGDFPQTF AMRTYGIWWDKAPSHLKEIHPQSLPAVHSEDFIVLYFEDYVIPEEIAIFETFNPGAIV RIWAYTITKAWVCLWDDAEFYKRPAYTANKARRFSPLLKKIHLPTKTIRLEFNHQRLH YYTEIDAVLLGGRKFNMSNLQNLLDFQERQRKGSILCKLQNMKFRPVCQDNYQTRLQH FLDHDLNKFMSAVSDVQIKQINNNDSTRVSHVGLKDMPFDIVLKIFSYLDLISLFRVG QVSRFFYDVSNHPLLYSELNLKPYWHLASTELLSTLAKRATVLKKLDMSWCGCTIQTV SPTEFKKFIQQRGDTLTHLRLNSSKFLNSSCIETLGIVCDNLKELSLRNCSLSPPLLN FSCLANLKNLERLDLFQTVIEQDLLLTMLESNPKLKHLNLAFCNVAVNMDDVALHVSE YNKNLVSLDMWKAHFLSAQGVLALSKCHDLEEVDFGWCLREATLGDSLKEFLMKCPKL KKLFLAAVRGLTDRDLEDIANLCPNLEQLDLMGVLGISKERYQDILQKCKKLELMDLS FCDNIMDYEVAMWSHNFKVNIKCCHVPNEIR" polyA_site 3189 /gene="LOC106088034" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agcaataatc tttgaacaac acaagttaaa tattgaacca tgcattgaaa caaagcaact 61 atttacgcaa gtttttgagt gtttttgttt tgtgtgtcga gtgtgtgcag cccatgaaaa 121 ggaggaggaa acttaaatcc tattaaagat actacaaaga aaaatgttgt aattcgaaag 181 gcgaaataca agtttatagc cagcaagacc accaccattc cagccattca cctggggact 241 cagcaaactt caagtaagga cattcgctgt caacccattt gccgtcgttt tgttttgaca 301 gaagccgtac aaaatataat cccgcagagt gctagtgagg cgggtagttt ggcaatcatc 361 gaaaccggca aacttccagc tcaaaaacaa aaataattca tatgtcctct ctgttgtggt 421 ggttgtggga aacttcttca agattgtgtt cgattggaat ctttggacac ggcccccatc 481 ctccacggct gccgcagcag gaagcgttgt tccaagacca gctgccagtt gtgctggacg 541 tagctggttt ggattcggtt tcacacctca acaattattg acattgagca agtatttgaa 601 gcaattgtgt cgggcttacg gaaatagttc ggcccatgaa atgtcctcct ctacggagga 661 cgaaacgcag gaaaatgtgg acgtacatgt accgattaaa attaatacac aacagtcttc 721 gggtatggga aatgcatcgg atagcgatga ttataacgat gtggcgggag ctttggtaga 781 tgtggaggga ttttgttatg ctgactatcg tatagaacaa tatgcccata gtgttttgga 841 tttcagttca cagtatggca tcgatttaag catctcatac acagcgccca atattacggg 901 cagaccttca aagtatcccg attatggaga ttttcctcaa acatttgcta tgcgcaccta 961 tggcatttgg tgggataaag ctccctccca cctcaaggaa attcatcccc aaagtttacc 1021 cgccgtacac tccgaagatt ttatagtgct ctatttcgaa gactatgtaa taccggaaga 1081 aatcgcaatt tttgagacat ttaatccggg tgctattgta cgcatttggg cgtacaccat 1141 tacaaaggct tgggtatgtc tatgggatga tgctgaattc tataaaagac ctgcgtatac 1201 agcgaataaa gcaaggcgat tctcaccact actgaaaaaa atacacctac ctacaaaaac 1261 tataagactg gaattcaacc atcaacgtct tcattattat actgaaatag atgcagtttt 1321 gttaggtgga cgaaaattca atatgagcaa tttgcagaac ttgttggact ttcaagagcg 1381 gcagcgcaaa ggttccatcc tatgcaaatt gcaaaatatg aagtttcgtc cagtgtgtca 1441 agacaattac cagacgcgtc tgcaacattt tttagatcac gatctgaata aattcatgtc 1501 agccgtttca gatgtacaaa ttaagcagat caacaacaat gacagcacta gagtttcgca 1561 tgtcggctta aaagatatgc cgtttgatat tgtgttaaaa atctttagct acctggattt 1621 gatttcatta tttcgtgtgg gccaggtgtc gcgcttcttc tatgatgtct ccaatcatcc 1681 actgttatac agtgaattga atttgaaacc atattggcat ttagcatcga cggaattgct 1741 ttcgacattg gccaagagag caacagtgct taagaaattg gatatgtcat ggtgtggctg 1801 taccatacaa acagtgtcgc caacggaatt caaaaaattc atacaacaaa ggggcgatac 1861 attgacccat ttacgtttga attcctcgaa attcttgaat tccagctgca ttgaaaccct 1921 gggtatagtc tgtgataatt taaaagaact ctctttgcga aattgctctc tgagcccgcc 1981 tctgttaaat tttagctgct tggctaattt gaaaaatctc gaacgtttgg atttatttca 2041 aacggtgatt gaacaggacc tacttttgac catgttggaa agtaatccca aattaaaaca 2101 cttaaattta gctttttgta atgttgctgt aaatatggac gatgtggctt tacatgtttc 2161 ggaatataat aaaaatttgg tctccctgga tatgtggaaa gctcattttc tctcagcgca 2221 gggagtgctg gccctatcta agtgtcatga tctcgaagaa gtggattttg gttggtgctt 2281 acgagaggca accttgggtg acagcttgaa agagtttctt atgaaatgcc ccaaacttaa 2341 aaagttattt ttggccgctg tgcgtggcct aaccgatcgt gatttagagg atattgccaa 2401 tttgtgtccg aatttggaac aattagatct aatgggtgtt ttgggtatat ccaaagaaag 2461 atatcaagac attcttcaaa aatgtaaaaa acttgaattg atggatttaa gcttttgcga 2521 taacatcatg gattatgagg tggctatgtg gtctcataac tttaaagtaa atatcaaatg 2581 ctgtcatgta cctaacgaaa ttagataagt ttttatggag tattcttaaa ggaacctata 2641 gtcaaatttt taagagtaac aaatccaaga aaagccttta atgcataatt tgtagttact 2701 ataaaaagac aaactgttaa tgtgtgtaga tagtaaataa aaaattaaaa ctgtaagtgt 2761 gttcgtatag tccaaaaatt tgcacaaatt gttactcgaa attgttcgcg tacttttttg 2821 gccagcggaa gaggacggaa gaatgcgtaa gagcgagcta aattttgaga tattcgaaat 2881 tgagagcgta caaatatctg ctggagattt tttttccagc agaaatttgg aacagctgtt 2941 ttatgaaatc cagctgttaa attaaataca aatttttgct ggtaaagtac gcgaatagat 3001 cttataagtg ctaatttatt tgaacttcat aatgaacctt aaataggcat ggctcatggt 3061 acaattaaga ggtagcgtca ttagaacaac aacaaaaatc taccccaacg aaactacctt 3121 gagtgacaaa tgccgtaaat tgaaatgaca aagttgtatt ttagaaataa actttcattt 3181 tacaactta