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LOCUS XM_013253319 3174 bp mRNA linear INV 02-SEP-2023 (LOC106088034), transcript variant X1, mRNA. ACCESSION XM_013253319 VERSION XM_013253319.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013253319.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3174 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3174 /gene="LOC106088034" /note="F-box/LRR-repeat protein 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106088034" CDS 626..2593 /gene="LOC106088034" /codon_start=1 /product="F-box/LRR-repeat protein 4" /protein_id="XP_013108773.2" /db_xref="GeneID:106088034" /translation="MSSSTEDETQENVDVHVPIKINTQQSSGMGNASDSDDYNDVAGA LVDVEGFCYADYRIEQYAHSVLDFSSQYGIDLSISYTAPNITGRPSKYPDYGDFPQTF AMRTYGIWWDKAPSHLKEIHPQSLPAVHSEDFIVLYFEDYVIPEEIAIFETFNPGAIV RIWAYTITKAWVCLWDDAEFYKRPAYTANKARRFSPLLKKIHLPTKTIRLEFNHQRLH YYTEIDAVLLGGRKFNMSNLQNLLDFQERQRKGSILCKLQNMKFRPVCQDNYQTRLQH FLDHDLNKFMSAVSDVQIKQINNNDSTRVSHVGLKDMPFDIVLKIFSYLDLISLFRVG QVSRFFYDVSNHPLLYSELNLKPYWHLASTELLSTLAKRATVLKKLDMSWCGCTIQTV SPTEFKKFIQQRGDTLTHLRLNSSKFLNSSCIETLGIVCDNLKELSLRNCSLSPPLLN FSCLANLKNLERLDLFQTVIEQDLLLTMLESNPKLKHLNLAFCNVAVNMDDVALHVSE YNKNLVSLDMWKAHFLSAQGVLALSKCHDLEEVDFGWCLREATLGDSLKEFLMKCPKL KKLFLAAVRGLTDRDLEDIANLCPNLEQLDLMGVLGISKERYQDILQKCKKLELMDLS FCDNIMDYEVAMWSHNFKVNIKCCHVPNEIR" polyA_site 3174 /gene="LOC106088034" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agcaataatc tttgaacaac acaagttaaa tattgaacca tgcattgaaa caaagcaact 61 atttacgcaa gtttttgagt gtttttgttt tgtgtgtcga gtgtgtgcag cccatgaaaa 121 ggaggaggaa acttaaatcc tattaaagat actacaaaga aaaatgttgt aattcgaaag 181 gcgaaataca agtttatagc cagcaagacc accaccattc cagccattca cctggggact 241 cagcaaactt caagtcaacc catttgccgt cgttttgttt tgacagaagc cgtacaaaat 301 ataatcccgc agagtgctag tgaggcgggt agtttggcaa tcatcgaaac cggcaaactt 361 ccagctcaaa aacaaaaata attcatatgt cctctctgtt gtggtggttg tgggaaactt 421 cttcaagatt gtgttcgatt ggaatctttg gacacggccc ccatcctcca cggctgccgc 481 agcaggaagc gttgttccaa gaccagctgc cagttgtgct ggacgtagct ggtttggatt 541 cggtttcaca cctcaacaat tattgacatt gagcaagtat ttgaagcaat tgtgtcgggc 601 ttacggaaat agttcggccc atgaaatgtc ctcctctacg gaggacgaaa cgcaggaaaa 661 tgtggacgta catgtaccga ttaaaattaa tacacaacag tcttcgggta tgggaaatgc 721 atcggatagc gatgattata acgatgtggc gggagctttg gtagatgtgg agggattttg 781 ttatgctgac tatcgtatag aacaatatgc ccatagtgtt ttggatttca gttcacagta 841 tggcatcgat ttaagcatct catacacagc gcccaatatt acgggcagac cttcaaagta 901 tcccgattat ggagattttc ctcaaacatt tgctatgcgc acctatggca tttggtggga 961 taaagctccc tcccacctca aggaaattca tccccaaagt ttacccgccg tacactccga 1021 agattttata gtgctctatt tcgaagacta tgtaataccg gaagaaatcg caatttttga 1081 gacatttaat ccgggtgcta ttgtacgcat ttgggcgtac accattacaa aggcttgggt 1141 atgtctatgg gatgatgctg aattctataa aagacctgcg tatacagcga ataaagcaag 1201 gcgattctca ccactactga aaaaaataca cctacctaca aaaactataa gactggaatt 1261 caaccatcaa cgtcttcatt attatactga aatagatgca gttttgttag gtggacgaaa 1321 attcaatatg agcaatttgc agaacttgtt ggactttcaa gagcggcagc gcaaaggttc 1381 catcctatgc aaattgcaaa atatgaagtt tcgtccagtg tgtcaagaca attaccagac 1441 gcgtctgcaa cattttttag atcacgatct gaataaattc atgtcagccg tttcagatgt 1501 acaaattaag cagatcaaca acaatgacag cactagagtt tcgcatgtcg gcttaaaaga 1561 tatgccgttt gatattgtgt taaaaatctt tagctacctg gatttgattt cattatttcg 1621 tgtgggccag gtgtcgcgct tcttctatga tgtctccaat catccactgt tatacagtga 1681 attgaatttg aaaccatatt ggcatttagc atcgacggaa ttgctttcga cattggccaa 1741 gagagcaaca gtgcttaaga aattggatat gtcatggtgt ggctgtacca tacaaacagt 1801 gtcgccaacg gaattcaaaa aattcataca acaaaggggc gatacattga cccatttacg 1861 tttgaattcc tcgaaattct tgaattccag ctgcattgaa accctgggta tagtctgtga 1921 taatttaaaa gaactctctt tgcgaaattg ctctctgagc ccgcctctgt taaattttag 1981 ctgcttggct aatttgaaaa atctcgaacg tttggattta tttcaaacgg tgattgaaca 2041 ggacctactt ttgaccatgt tggaaagtaa tcccaaatta aaacacttaa atttagcttt 2101 ttgtaatgtt gctgtaaata tggacgatgt ggctttacat gtttcggaat ataataaaaa 2161 tttggtctcc ctggatatgt ggaaagctca ttttctctca gcgcagggag tgctggccct 2221 atctaagtgt catgatctcg aagaagtgga ttttggttgg tgcttacgag aggcaacctt 2281 gggtgacagc ttgaaagagt ttcttatgaa atgccccaaa cttaaaaagt tatttttggc 2341 cgctgtgcgt ggcctaaccg atcgtgattt agaggatatt gccaatttgt gtccgaattt 2401 ggaacaatta gatctaatgg gtgttttggg tatatccaaa gaaagatatc aagacattct 2461 tcaaaaatgt aaaaaacttg aattgatgga tttaagcttt tgcgataaca tcatggatta 2521 tgaggtggct atgtggtctc ataactttaa agtaaatatc aaatgctgtc atgtacctaa 2581 cgaaattaga taagttttta tggagtattc ttaaaggaac ctatagtcaa atttttaaga 2641 gtaacaaatc caagaaaagc ctttaatgca taatttgtag ttactataaa aagacaaact 2701 gttaatgtgt gtagatagta aataaaaaat taaaactgta agtgtgttcg tatagtccaa 2761 aaatttgcac aaattgttac tcgaaattgt tcgcgtactt ttttggccag cggaagagga 2821 cggaagaatg cgtaagagcg agctaaattt tgagatattc gaaattgaga gcgtacaaat 2881 atctgctgga gatttttttt ccagcagaaa tttggaacag ctgttttatg aaatccagct 2941 gttaaattaa atacaaattt ttgctggtaa agtacgcgaa tagatcttat aagtgctaat 3001 ttatttgaac ttcataatga accttaaata ggcatggctc atggtacaat taagaggtag 3061 cgtcattaga acaacaacaa aaatctaccc caacgaaact accttgagtg acaaatgccg 3121 taaattgaaa tgacaaagtt gtattttaga aataaacttt cattttacaa ctta