PREDICTED: Stomoxys calcitrans mitochondrial tRNA-specific

LOCUS       XM_013253108            1534 bp    mRNA    linear   INV 02-SEP-2023
            2-thiouridylase 1 (LOC106087901), transcript variant X2, mRNA.
ACCESSION   XM_013253108
VERSION     XM_013253108.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013253108.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1534
                     /gene="LOC106087901"
                     /note="mitochondrial tRNA-specific 2-thiouridylase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:106087901"
     CDS             439..1503
                     /gene="LOC106087901"
                     /codon_start=1
                     /product="mitochondrial tRNA-specific 2-thiouridylase 1
                     isoform X2"
                     /protein_id="XP_013108562.1"
                     /db_xref="GeneID:106087901"
                     /translation="MRNWDEFDELGRCSGEKDLLDAEYACNKLGIELKQVNYVKQYWN
                     SVFTSFLEDYEIGLTPNPDILCNKHIKFDLFYNYALYNLQNNAIATGHYAKTNFGPFL
                     EKYQQNEDIRLLIPKDTFKDQTFFLSGIKRHTLRRTMFPLANFLKAEVKELAIKCGLE
                     RLTQKKESTGLCFVGKRDFKEFIKEYIKSKPGDFVDIDTNLVVGHHEGIHQWTIGQRC
                     RLHSFLKPYYVAQKDVTNNTIYVAAGHENPALYSNQIIASNANWFSSNAFEQTINGVL
                     KCRFRFQHTKPLVNCSIYRRQSAKSAQDLIIELDKPLRAITPGQYAVFYSDTDCIGSA
                     RILSARNFKAKPQTREIMEN"
     misc_feature    439..1446
                     /gene="LOC106087901"
                     /note="MnmA/TRMU family 2-thiouridylases and similar
                     proteins; Region: MnmA_TRMU-like; cd01998"
                     /db_xref="CDD:467502"
     polyA_site      1534
                     /gene="LOC106087901"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggagtacaag tccaggataa gcaataactg cagaatgcgt ggaacaaata acagtttaaa
       61 gatcaattag cgaaaaatta agtaaagtat gtttttgtat gatcttgctt taaggataag
      121 ctagatccat gggcttgaat ataaagtgtt aaagttagtg ttgtggaagc ctcttttgaa
      181 catgtgaaag gcttcaaaaa ctcgtgtttt catatcgagt atcatatata agcaaaagcc
      241 ggtgccggcc ggcctcttac tgagactctc ccctcgatac cgctaattgt ctaaatgcag
      301 ttgcaactat tccgtatacg gagtgtgttt tgtgaaagct gaaagtatat catttttcgc
      361 aacgatgcgg ccgaaaccct gtacagatgt tggaagtcat aacagaactt aacatgttat
      421 gaggtacttg gagtctttat gagaaattgg gatgagttcg atgaattagg acgatgttca
      481 ggcgaaaaag atttattaga cgcagaatat gcatgtaaca aactgggaat tgaactaaag
      541 caagtcaatt atgtaaaaca atattggaac tcagtgttca cgagtttttt ggaggactat
      601 gaaattggcc tgaccccaaa tccggatatt ttgtgtaata aacatattaa atttgatttg
      661 ttttataatt atgcacttta taacctgcag aataatgcta ttgctaccgg tcactatgca
      721 aaaacaaact ttgggccatt tttggaaaag tatcagcaga atgaagatat acgtttactt
      781 ataccaaagg acacatttaa ggatcaaacc ttttttctct caggcataaa acggcatacc
      841 ttaaggagaa caatgtttcc tttagccaat tttttgaaag ctgaggttaa agaactcgcc
      901 ataaagtgtg gtttagagcg attgacacag aaaaaagaga gtactggctt atgttttgtg
      961 ggtaaaagag atttcaagga attcataaaa gagtatataa aatccaaacc aggcgatttt
     1021 gttgatattg atactaatct agtggtgggt catcacgaag gcattcacca atggaccata
     1081 gggcaacgct gccgccttca ctcctttctc aaaccttatt atgtagcaca aaaagatgtt
     1141 acaaacaaca ccatttatgt agctgctggt catgaaaatc ctgccttata ttccaaccaa
     1201 attattgcct caaatgccaa ttggttttct tcaaatgcat ttgaacaaac aatcaatggt
     1261 gtgctgaagt gtcgttttcg ttttcagcat acaaaacctt tggtgaactg tagtatttat
     1321 cgaagacaat ctgcaaagag cgctcaagac ttaattatag aacttgacaa gcccttgcga
     1381 gccataaccc caggacaata tgcggtgttt tatagtgata ctgattgtat aggttctgcg
     1441 agaatattaa gtgccagaaa ttttaaagct aaacctcaaa caagagaaat tatggaaaat
     1501 taatgaataa aatcaaagcg gtaaccgaaa agta