PREDICTED: Stomoxys calcitrans mitochondrial tRNA-specific

LOCUS       XM_013253107            1503 bp    mRNA    linear   INV 02-SEP-2023
            2-thiouridylase 1 (LOC106087901), transcript variant X1, mRNA.
ACCESSION   XM_013253107
VERSION     XM_013253107.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013253107.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1503
                     /gene="LOC106087901"
                     /note="mitochondrial tRNA-specific 2-thiouridylase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 Proteins"
                     /db_xref="GeneID:106087901"
     CDS             309..1472
                     /gene="LOC106087901"
                     /codon_start=1
                     /product="mitochondrial tRNA-specific 2-thiouridylase 1
                     isoform X1"
                     /protein_id="XP_013108561.1"
                     /db_xref="GeneID:106087901"
                     /translation="MFRKVAVGISGGVDSAVSAFLLKEHGYEVLGVFMRNWDEFDELG
                     RCSGEKDLLDAEYACNKLGIELKQVNYVKQYWNSVFTSFLEDYEIGLTPNPDILCNKH
                     IKFDLFYNYALYNLQNNAIATGHYAKTNFGPFLEKYQQNEDIRLLIPKDTFKDQTFFL
                     SGIKRHTLRRTMFPLANFLKAEVKELAIKCGLERLTQKKESTGLCFVGKRDFKEFIKE
                     YIKSKPGDFVDIDTNLVVGHHEGIHQWTIGQRCRLHSFLKPYYVAQKDVTNNTIYVAA
                     GHENPALYSNQIIASNANWFSSNAFEQTINGVLKCRFRFQHTKPLVNCSIYRRQSAKS
                     AQDLIIELDKPLRAITPGQYAVFYSDTDCIGSARILSARNFKAKPQTREIMEN"
     misc_feature    318..1415
                     /gene="LOC106087901"
                     /note="MnmA/TRMU family 2-thiouridylases and similar
                     proteins; Region: MnmA_TRMU-like; cd01998"
                     /db_xref="CDD:467502"
     polyA_site      1503
                     /gene="LOC106087901"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taaaatataa tagattgtgc aattggcccg cctcaacatc gtccgaaaac aatgccaaca
       61 agtccatatt tcgcctggat ttgactaaag tattgatact gaaatcggtc acaaccatat
      121 ataaccctcg attagctgtg tgctgctcga agctttaatt ttagcctggt ttggcagaaa
      181 tttgtagaaa aattatgcac tttgaaacgc attagaatgg ttttctgagg caagaaactt
      241 agattgttgt tggatgccaa taaaaaatcg tcgtatggtt taactaatga aatccttaac
      301 aaaaggcaat gtttagaaag gtggctgttg gtatatcagg aggagttgac agtgccgtca
      361 gtgcttttct gctgaaagag catggttatg aggtacttgg agtctttatg agaaattggg
      421 atgagttcga tgaattagga cgatgttcag gcgaaaaaga tttattagac gcagaatatg
      481 catgtaacaa actgggaatt gaactaaagc aagtcaatta tgtaaaacaa tattggaact
      541 cagtgttcac gagttttttg gaggactatg aaattggcct gaccccaaat ccggatattt
      601 tgtgtaataa acatattaaa tttgatttgt tttataatta tgcactttat aacctgcaga
      661 ataatgctat tgctaccggt cactatgcaa aaacaaactt tgggccattt ttggaaaagt
      721 atcagcagaa tgaagatata cgtttactta taccaaagga cacatttaag gatcaaacct
      781 tttttctctc aggcataaaa cggcatacct taaggagaac aatgtttcct ttagccaatt
      841 ttttgaaagc tgaggttaaa gaactcgcca taaagtgtgg tttagagcga ttgacacaga
      901 aaaaagagag tactggctta tgttttgtgg gtaaaagaga tttcaaggaa ttcataaaag
      961 agtatataaa atccaaacca ggcgattttg ttgatattga tactaatcta gtggtgggtc
     1021 atcacgaagg cattcaccaa tggaccatag ggcaacgctg ccgccttcac tcctttctca
     1081 aaccttatta tgtagcacaa aaagatgtta caaacaacac catttatgta gctgctggtc
     1141 atgaaaatcc tgccttatat tccaaccaaa ttattgcctc aaatgccaat tggttttctt
     1201 caaatgcatt tgaacaaaca atcaatggtg tgctgaagtg tcgttttcgt tttcagcata
     1261 caaaaccttt ggtgaactgt agtatttatc gaagacaatc tgcaaagagc gctcaagact
     1321 taattataga acttgacaag cccttgcgag ccataacccc aggacaatat gcggtgtttt
     1381 atagtgatac tgattgtata ggttctgcga gaatattaag tgccagaaat tttaaagcta
     1441 aacctcaaac aagagaaatt atggaaaatt aatgaataaa atcaaagcgg taaccgaaaa
     1501 gta