Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans GPN-loop GTPase 1 (LOC106087897),


LOCUS       XM_013253094            1232 bp    mRNA    linear   INV 02-SEP-2023
            mRNA.
ACCESSION   XM_013253094
VERSION     XM_013253094.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013253094.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1232
                     /gene="LOC106087897"
                     /note="GPN-loop GTPase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:106087897"
     CDS             67..1197
                     /gene="LOC106087897"
                     /codon_start=1
                     /product="GPN-loop GTPase 1"
                     /protein_id="XP_013108548.2"
                     /db_xref="GeneID:106087897"
                     /translation="MADSDKTPLSVENGPQSSPICLIVLGMAGSGKTTFVQKLTQTSF
                     EQFKPYVINLDPACRETPYHANIDIRDTVNYKEVMKQYKLGPNGGIVTSLNLFATKFE
                     KVVELVRRAGTQGHKWCIIDTPGQIEVFTWSASGTIITEALATMFPTIVVYVMDVVRS
                     VSPTTFMSNMLYACSILYKARLPFVVVMNKIDMQDHDFAVEWMTDFEAFQEALEKEQN
                     YISNLTRTMSLTLDEFYCGLKTCGISSKTGIGFDVFFNLVAEGALEYENDYKAEYNKL
                     REEKLREQNKKQEEKLMDIAKSKGAGSEILLTGFVEEVSSGRELSDVYLKHPGNESSE
                     DEEGNEEEAPSTFQIEQVEEQNFQQFVQNRIDTQKEKNKQMM"
     polyA_site      1232
                     /gene="LOC106087897"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttagcgacg tcgctaaatt ctcgctcatt aatttgtttt gaataaagaa ttctacatct
       61 cacccaatgg ctgacagtga taaaacacct ctatctgtgg aaaatggacc tcaatcatct
      121 cccatatgtc ttattgttct gggtatggct ggttccggta aaaccacttt tgtacaaaag
      181 ctaacacaga catcgtttga gcaattcaag ccctatgtta taaatctgga tccggcatgc
      241 agggaaactc cttaccatgc taacatagat atacgagaca cggtcaacta caaagaagtt
      301 atgaaacaat ataaacttgg tcctaatgga ggcattgtga catctttaaa tttgtttgcc
      361 accaaatttg aaaaagttgt tgagttagta cgtagagcgg gaactcaggg tcataaatgg
      421 tgcatcatag ataccccggg acaaattgaa gtgtttacct ggtctgcatc tggaactatt
      481 ataacagaag cattagccac catgtttccc accatagttg tttatgttat ggacgtggtt
      541 cgatcagtaa gtcccacaac gtttatgtct aatatgttat atgcctgctc aatattgtat
      601 aaagctagat tgccgtttgt ggtggtaatg aataagattg atatgcaaga tcacgatttc
      661 gctgttgagt ggatgacgga ttttgaagct ttccaggaag cattggagaa ggaacagaac
      721 tatataagta atttaacccg cacaatgtct ttaacattag atgaattcta ttgtggtctg
      781 aaaacatgtg gaatatcatc caaaactgga attggctttg acgtgttctt caacttggtt
      841 gcagaaggag cactggaata tgaaaatgat tacaaggcag agtacaacaa actacgagaa
      901 gaaaaactaa gagaacaaaa taagaaacag gaagaaaagt taatggatat agcaaagagc
      961 aaaggggcag gaagtgaaat attgctaaca ggatttgttg aagaggtgtc gagtggtcgt
     1021 gaactttctg atgtctattt gaaacatccc ggtaacgaaa gttctgaaga tgaagaggga
     1081 aatgaagaag aagcgccttc cacgtttcaa atagagcagg tggaggaaca gaatttccaa
     1141 caatttgttc aaaatcgtat tgatacacaa aaagagaaaa ataagcaaat gatgtgatat
     1201 ttttaaaata aaatatgttt gcttattgca tt