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LOCUS XM_013252776 3246 bp mRNA linear INV 02-SEP-2023 mitochondrial (LOC106087655), transcript variant X2, mRNA. ACCESSION XM_013252776 VERSION XM_013252776.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013252776.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3246 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3246 /gene="LOC106087655" /note="proline dehydrogenase 1, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106087655" CDS 449..2581 /gene="LOC106087655" /codon_start=1 /product="proline dehydrogenase 1, mitochondrial isoform X2" /protein_id="XP_013108230.1" /db_xref="GeneID:106087655" /translation="MAFLRSVCAQRTNLVYSCSGSGSLSAGRRQYQSGPNKSAAAAVA SSNVCQTSNDEESSYSPKQHQQSLRKRVFQQVLFAPAFNQQQYYQQRGIHTNDTKSQV TATQSLGSDAKSSSGYTSSYRPPPRPKIPENPQRDPLDVSFNDPNAAFKSKTTWELVR AYLVYIICSSEKLVEHNMKLMKVANTILGDKLFTALMKATFYGHFVAGEDQIKIIPTL ERLRSFGVKPILDYSVEEDLSQEEAEKREVESSVSSMAPAPAGDEEATLPQYKIDKTF ADRRFKVNSARTYFYLNEATCERNMETFIKCLEAVSVDDKKYFPRRTSEGATFGTGIT AIKLTALGRPQLLLQLSEVIMRTRKYMEDMVGGQGNVLTHHKTIKDLEKYYESLGDNK NVKEFLKNVTSDKEGILHLFPWSGIVDENSQLSDTFRVPDPKTGQMRRLTSQIPHKEE EMFRNMIRRLNTIVKTAAELDVRIMIDAEQTYFQPAISRITLEMMRKYNKDKAIVFNT YQCYLRQAFSEVNTDLEQAKRQNFYFGAKLVRGAYMEQERARAEALGYPDPVNPDFDA TTEMYHKTLTECLRRIKILKDNGEDAKKIGIMVASHNEDTVRYAIQKMKEIGISPEDK VICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVQEVLPYLSRRAQENKGVLKKIQKE KRLLLAEIARRLVRGQLFYKPKGNYVPI" misc_feature 818..2530 /gene="LOC106087655" /note="proline dehydrogenase; Region: PLN02681" /db_xref="CDD:215366" polyA_site 3246 /gene="LOC106087655" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgttttgtca gttgtcgttc gacgccgcga cgtgattctt gaattcattc ttccttctcg 61 gtggtgcttg tgtgatacta ctgtgaaaac cgacgaacat acacagtgtc agtgtaaaaa 121 aaacagacag aaaacggttt tagtgtaaac aatcgacgac gactcttgcc ttttgaggtt 181 ttattcgttc aacacataat atcgcataaa agtgctgcct cggaactgaa tttgcaaatt 241 tgaaaaccaa aagcacaagg aggcaaagaa caaaacaacc acaaaagagc gagtttaact 301 ccaaattgaa aacgtgtccg ttccccttaa taaaacaaaa acataaaaac gaaaccacca 361 caaacaaacg tgaaataatt ctctcggaat taaacagcta ttgaaaagac actcgtttta 421 attcatccca agttagtgcg cgtgtgtaat ggcgtttttg cgttccgttt gtgctcaacg 481 taccaattta gtttatagtt gtagcggcag tggcagtctc agcgctggta gacgtcaata 541 ccaaagtggc cccaataaat cagcagcagc ggcagtagca tcctccaatg tttgccaaac 601 ctcaaatgac gaggaatcaa gctactcccc taagcaacat cagcaatcat tgagaaaacg 661 ggtattccaa caagtgctgt ttgctcccgc cttcaatcag caacagtatt accaacaacg 721 tggcatccat acaaatgata ccaaatctca ggtgactgca acacagtccc ttggcagcga 781 tgccaagtca tcttcaggtt acacctctag ctatagacca ccacccaggc caaagatacc 841 cgaaaatccc caacgtgatc cattggatgt cagtttcaac gatccaaatg cggcattcaa 901 gagcaagaca acatgggagc tagtccgtgc ctatcttgtc tatataattt gctccagcga 961 aaaactagtc gaacataata tgaagcttat gaaagtggca aatacaatac tgggagataa 1021 attgtttaca gctctaatga aggcaacatt ctatggacac tttgttgctg gcgaagatca 1081 aatcaaaatc ataccaacac tcgaaaggtt gcgttctttt ggtgttaaac ccattctgga 1141 ttactcggtt gaagaggatc tctcacaaga ggaagctgag aaacgtgaag ttgaatcttc 1201 cgtatccagc atggcccctg cccctgccgg tgatgaagaa gcaaccctgc ctcaatataa 1261 aatcgataaa acatttgccg atcgtcgctt caaggtcaac agtgccagaa cctacttcta 1321 cttgaacgaa gccacttgcg aacgcaacat ggaaaccttc atcaaatgtt tggaagccgt 1381 ttcagtcgac gataagaagt atttccctcg acgcacttct gagggcgcta cctttggtac 1441 cggcatcaca gccattaaat taaccgccct gggtcgtcct caactattgt tgcaattgtc 1501 tgaggttatt atgcgcacac gtaaatacat ggaagacatg gtcggtggtc aaggcaatgt 1561 cttgacacat cataagacga ttaaggactt ggagaagtac tacgaaagtt tgggtgataa 1621 taagaatgtt aaagaattct taaagaatgt tacctccgat aaagaaggta ttttgcactt 1681 gttcccctgg tctggtattg tcgatgaaaa ttcacagctc agtgacacct tcagagtacc 1741 cgatccaaaa accggtcaaa tgcgtcgttt gacctcacaa attccacata aggaagaaga 1801 aatgtttaga aatatgattc gtcggttaaa taccattgtt aagactgctg ctgaattgga 1861 tgtccgtata atgattgatg ctgaacaaac ttacttccag ccagctattt cacgtattac 1921 tcttgaaatg atgcgtaaat acaataaaga taaggccatt gtattcaata cataccaatg 1981 ctatttgcgt caagcattca gtgaggttaa taccgatttg gagcaagcta agcgtcaaaa 2041 cttctacttt ggtgctaaat tagtgcgagg tgcttacatg gaacaggaac gtgccagagc 2101 agaagcattg ggttatcccg acccagtgaa tcctgatttt gatgctacca cagaaatgta 2161 ccacaaaact ttaactgaat gtttgagacg aattaaaata ctcaaagata atggtgagga 2221 tgccaagaaa attggtatta tggtagcatc tcacaacgaa gacactgttc gctatgccat 2281 ccagaagatg aaggaaattg gaatttctcc agaggacaaa gtcatatgtt tcggccaatt 2341 attgggcatg tgcgattata ttactttccc attaggtcaa gctggttact cggcctataa 2401 gtatatacca tacggtccag tacaagaagt cttgccatat ctctcgcgca gagcacaaga 2461 gaacaagggc gttctgaaga aaatccaaaa ggaaaagcgt ttgctgcttg ccgaaatcgc 2521 acgacgactc gtacgcggtc aattgttcta caaacccaag ggcaactatg tacccatata 2581 aatcaacaaa aacaatacaa ctacaacaac ctaccactcc tgctcaccct tagaaaaaac 2641 aaaagaaaag aaaacacact catacatcta caaaaccaca caaacacagt atctcattca 2701 ctaaaagcgt cgattactat ttaaaaggaa aacttaactt aattcaactt aacccgacaa 2761 gcatacacac tgaaatcttt aaaacccgta acccactcta gactcggact aggttcacat 2821 tgaagcagat tggggacaac tgcggccttg ttccgcaaaa aacaaaaatg aattaaataa 2881 attctttgta aatatatggt actgcaggtg gcttaatctg ttgcgctgtg aacctgtgaa 2941 agaagatgtt aacgaataac aaacgaaata aaacctttgg acccacttct actagactca 3001 gacatacatc taaacccata tccattgatc catccatcct gggtagggta aagagaacta 3061 ttggagtttt ttgttctttt ttctaccaaa atctccctcc taaaacaatg cgaataacaa 3121 taatggaatt tttgaaaatt gtataaatgc gaatattgtt ttgtttggaa aaagacatcg 3181 tcaaggataa taaatgtgcc ctctcatgtt aacatgccca aggcagacat aatatcccac 3241 actata