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LOCUS XM_013252773 3351 bp mRNA linear INV 02-SEP-2023 (LOC106087653), transcript variant X7, mRNA. ACCESSION XM_013252773 VERSION XM_013252773.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013252773.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3351 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3351 /gene="LOC106087653" /note="histone deacetylase 6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:106087653" CDS 529..3264 /gene="LOC106087653" /codon_start=1 /product="histone deacetylase 6 isoform X6" /protein_id="XP_013108227.2" /db_xref="GeneID:106087653" /translation="MSSPIVTRRGAQKAKIQTRAMVKSSVDNRKPNAALLEAKRKAKL LKMQQPTQIDGAIKDIFQNAVNAKHMMQGPTGLVYDESMSQHRCLWDDKHPECPERFI RVLDRCRELNLVERCQIIPSRRATKDEIMLLHSDEHYKLLEQTSGVQDDEKMEDLSSK YDSVYIHPSTFDLSLLSAGSTIDLVENVVTGAVQNGMAIIRPPGHHAMKAEFNGYCFF NNVAIATQYALDVLKVNKIMIIDWDVHHGQGTQRFFYHDPRVLYFSIHRFEHGTYWPN LKESDFDAIGYGPGLGYNFNLPLNKTGMTNGDYLAIFQQILIPVACEFQPELIIISAG YDAALGCPEGEMEVTPAFYSHLINPLLKLANSRLAVVLEGGYCLDSLAEGAALTLRAL LGEPCPSLVEKLDPPCPSIQESILNCIYAHRSYWKCLQAQDTYTMEDINNVNPQINLH KVSRVFIGGPPLPERFPTRGTGPNIPLEVVERNAQRLKRLKAETKLFSPKVRVCYVYD ELMLQHANTYEEGHPEQPERISKIYEMHQDYKLLERMQKLPSRSATTNEICLAHTRSH LNSIRRIGEKDELQNMGAKFNSVYFHPKTFECATVAAGSVLQVVDKVVKGEARSGVCI VRPPGHHAESDVPHGFCIFNNVAIAAQYAINDHGLNRVLIVDWDVHHGNGTQHIFESN PQVLYISVHRYDNATFFPKSKDGDYDSVGKGAGVGFNVNIPWNKKGMGDLEYIMAFQH IIMPIAYEFDPQLVLVSAGFDAAIGDPLGGCKVTPEAYGLFTHWLSALANGRIIVCLE GGYNVNSISYAMTMCTKSLLGDPIPSVQLNGSLMRPPTVAYLSCMETLQNCIGVQHRY WKSLTFGKRLPQVSGENNNEDFLSATLQNLDITRDDVQGAAGGSGDSGQNISLEQ" ORIGIN 1 aagagttttt cgcgagtgta gccaatggaa gaaagaaata attacacata aaaccgaccg 61 agtaaagctc atagaatcca aaaaataaaa tagctattac atatgcgtgt aaattctttc 121 atgtccatat aagagaaatc ccgaaaagaa attcttaata tacacttaca aaagaaagat 181 ttccaagcat aaaccaaggt gtgatttttt tagtgctttc caaaatgaaa tagtttaaca 241 aggacattta tcaatcaatc taaaggccac catttatcat tccttgcgat aatagctaat 301 gtacttcaat ataaacataa ttcttttgaa agttctgatt ttgtgtaatc gtcgggtcgc 361 ttgttgatga attcgggtcg aggaggacag caacgtgcgt gagaagtgaa gtgtgtttac 421 aataatctcc aacaataaca aaatatccaa cctccaacct acctgccagt ttgcctggca 481 ttttacattc tatttaacgt acaagagaca acaaatcatc atctcacaat gagttcgcct 541 attgttaccc gacggggagc acaaaaagct aaaatacaaa ctagagccat ggtcaaatcc 601 tcagtagata atcgaaagcc aaatgctgca ttactcgagg caaagcggaa agccaaacta 661 ttgaagatgc aacaacctac acaaatagat ggagcaatta aggacatatt tcaaaatgcc 721 gttaatgcaa aacacatgat gcaaggaccc actggtctgg tatatgatga atctatgtcg 781 caacacagat gcctttggga tgataaacat ccagaatgtc cagaaagatt tatacgtgtg 841 cttgatcgat gtcgcgaatt aaacttggtt gaacgttgtc agattatacc ctcaagacgt 901 gctacaaaag acgaaattat gcttttgcat agtgatgagc actacaaact gctggagcag 961 acgtcagggg ttcaagacga tgaaaaaatg gaagacttaa gttcaaaata tgactcagtt 1021 tacattcatc cgagcacttt tgatttatct ctactttcgg cgggttcaac tatagacttg 1081 gtggaaaatg ttgttactgg tgctgtgcaa aacggaatgg caattatacg accaccagga 1141 catcatgcca tgaaagctga atttaatggc tactgttttt tcaacaacgt tgccattgcc 1201 acacaatatg ccttggatgt attaaaagtg aataaaatta tgataatcga ttgggatgtg 1261 caccatggcc agggtaccca aagatttttc tatcatgatc ctagggtatt atatttttct 1321 attcatcgct ttgaacatgg cacctattgg cctaatctaa aggaatccga ttttgatgcc 1381 ataggctatg gtcctggctt gggttataat tttaacttac ctttgaacaa aactggcatg 1441 actaatggag actatttggc catcttccaa caaatactaa tacctgtggc atgtgaattc 1501 cagcctgagt tgataattat ctctgcggga tatgatgccg ctttgggttg ccctgaaggc 1561 gaaatggaag taacacctgc attttattcg catcttataa atcccttgct aaagttggcg 1621 aattcacgtt tggccgttgt tctagaggga ggttattgct tggattcctt ggcagaaggt 1681 gctgccttaa cattgagggc gcttttggga gaaccatgtc cttctttagt ggagaaattg 1741 gatcctccct gtccctctat acaagagtca attcttaatt gcatttacgc tcatcgttca 1801 tattggaaat gcttgcaagc acaagacaca tatacaatgg aggacataaa caatgtcaat 1861 cctcaaatca atttacataa agttagtagg gtatttatag ggggaccacc attgcctgaa 1921 cgcttcccca cccgaggtac tggccccaat attcccctgg aggtggtgga gcgtaatgca 1981 caacgtttga agagattaaa agcggaaaca aaactctttt caccaaaagt gcgagtctgc 2041 tatgtatacg atgaactaat gttgcaacat gccaatacct acgaagaggg tcatcctgag 2101 caacctgaac gcataagtaa aatttacgaa atgcatcaag actacaaact attggaacgc 2161 atgcaaaaac tgccttctcg ctcggcaacg acaaatgaaa tttgtttggc ccacacacga 2221 tctcacctga attctatacg gcgcataggg gagaaggacg aattgcaaaa catgggggcc 2281 aaattcaatt ccgtctattt tcatcctaag acattcgagt gtgcgactgt agctgcgggc 2341 tcagtgctgc aggtggttga caaagttgtt aagggagaag ctagaagtgg tgtttgcatt 2401 gttagacccc caggccatca tgcagaatca gatgttccgc atggcttttg catattcaat 2461 aatgtggcaa ttgccgccca gtatgccatc aatgaccatg gcttaaacag ggtgttaatt 2521 gtcgactggg atgtgcatca tggtaatggt actcagcata tatttgaatc caatccccag 2581 gtactttaca taagtgtgca tcggtatgac aatgcaacat tttttccaaa aagtaaagat 2641 ggtgattatg attcggtggg taaaggtgct ggggttggtt tcaatgtgaa cattccctgg 2701 aacaagaaag ggatgggcga tttggaatat atcatggctt tccagcatat tatcatgcca 2761 attgcttatg aatttgatcc tcaattggtc ttggtatcag ctggatttga tgctgccata 2821 ggtgaccccc ttggtggctg taaagtaaca cccgaagctt atggtttatt cacacactgg 2881 ctatcggctt tggctaatgg ccgcatcata gtttgccttg agggtggcta caatgtcaat 2941 tccatatcgt atgccatgac aatgtgcacc aaatccttgt tgggtgatcc cataccatca 3001 gtgcaattaa acggcagtct tatgcgtccg cccacagtag cctatctcag ctgcatggaa 3061 accttgcaaa attgcattgg agttcaacat cgctattgga aaagtctaac ctttggcaaa 3121 cggctgccac aggtgtcggg agaaaataac aatgaggatt ttctttctgc tactttacaa 3181 aatttagata ttacaaggga tgacgttcaa ggagcagctg gtggttccgg cgactccggt 3241 cagaatatat ctttagagca ataaatacga gtctaccatg taatgaatgt tcctcgacag 3301 ctgaaaactg gatgtgcctc agctgtcata aggtgttgtg cggtcgttat g