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LOCUS XM_013252770 4416 bp mRNA linear INV 02-SEP-2023 (LOC106087653), transcript variant X4, mRNA. ACCESSION XM_013252770 VERSION XM_013252770.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013252770.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4416 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4416 /gene="LOC106087653" /note="histone deacetylase 6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:106087653" CDS 532..3612 /gene="LOC106087653" /codon_start=1 /product="histone deacetylase 6 isoform X3" /protein_id="XP_013108224.2" /db_xref="GeneID:106087653" /translation="MSSPIVTRRGAQKAKIQTRAMVKSSVDNRKPNAALLEAKRKAKL LKMQQPTQIDGAIKDIFQNAVNAKHMMQGPTGLVYDESMSQHRCLWDDKHPECPERFI RVLDRCRELNLVERCQIIPSRRATKDEIMLLHSDEHYKLLEQTSGVQDDEKMEDLSSK YDSVYIHPSTFDLSLLSAGSTIDLVENVVTGAVQNGMAIIRPPGHHAMKAEFNGYCFF NNVAIATQYALDVLKVNKIMIIDWDVHHGQGTQRFFYHDPRVLYFSIHRFEHGTYWPN LKESDFDAIGYGPGLGYNFNLPLNKTGMTNGDYLAIFQQILIPVACEFQPELIIISAG YDAALGCPEGEMEVTPAFYSHLINPLLKLANSRLAVVLEGGYCLDSLAEGAALTLRAL LGEPCPSLVEKLDPPCPSIQESILNCIYAHRSYWKCLQAQDTYTMEDINNVNPQINLH KVSRVFIGGPPLPERFPTRGTGPNIPLEVVERNAQRLKRLKAETKLFSPKVRVCYVYD ELMLQHANTYEEGHPEQPERISKIYEMHQDYKLLERMQKLPSRSATTNEICLAHTRSH LNSIRRIGEKDELQNMGAKFNSVYFHPKTFECATVAAGSVLQVVDKVVKGEARSGVCI VRPPGHHAESDVPHGFCIFNNVAIAAQYAINDHGLNRVLIVDWDVHHGNGTQHIFESN PQVLYISVHRYDNATFFPKSKDGDYDSVGKGAGVGFNVNIPWNKKGMGDLEYIMAFQH IIMPIAYEFDPQLVLVSAGFDAAIGDPLGGCKVTPEAYGLFTHWLSALANGRIIVCLE GGYNVNSISYAMTMCTKSLLGDPIPSVQLNGSLMRPPTVAYLSCMETLQNCIGVQHRY WKSLTFGKRLPQVSGENNNEDFLSATLQNLDITRDDVQGAAGGSGDSGQNISLEASGS KPKVKVKTLTEYLTEHMQAFENNEMFAVVPLKNCPHLSQLHPEDAPKYNKRHLYLHTK AKCFLECHLSLLGQYLLPRQLFYFIKITFRDLAKVWRNLHFSRVYVCSLVCNKF" ORIGIN 1 ttgaagagtt tttcgcgagt gtagccaatg gaagaaagaa ataattacac ataaaaccga 61 ccgagtaaag ctcatagaat ccaaaaaata aaatagctat tacatatgcg tgtaaattct 121 ttcatgtcca tataagagaa atcccgaaaa gaaattctta atatacactt acaaaagaaa 181 gatttccaag cataaaccaa ggtgtgattt ttttagtgct ttccaaaatg aaatagttta 241 acaaggacat ttatcaatca atctaaaggc caccatttat cattccttgc gataatagct 301 aatgtacttc aatataaaca taattctttt gaaagttctg attttgtgta atcgtcgggt 361 cgcttgttga tgaattcggg tcgaggagga cagcaacgtg cgtgagaagt gaagtgtgtt 421 tacaataatc tccaacaata acaaaatatc caacctccaa cctacctgcc agtttgcctg 481 gcattttaca ttctatttaa cgtacaagag acaacaaatc atcatctcac aatgagttcg 541 cctattgtta cccgacgggg agcacaaaaa gctaaaatac aaactagagc catggtcaaa 601 tcctcagtag ataatcgaaa gccaaatgct gcattactcg aggcaaagcg gaaagccaaa 661 ctattgaaga tgcaacaacc tacacaaata gatggagcaa ttaaggacat atttcaaaat 721 gccgttaatg caaaacacat gatgcaagga cccactggtc tggtatatga tgaatctatg 781 tcgcaacaca gatgcctttg ggatgataaa catccagaat gtccagaaag atttatacgt 841 gtgcttgatc gatgtcgcga attaaacttg gttgaacgtt gtcagattat accctcaaga 901 cgtgctacaa aagacgaaat tatgcttttg catagtgatg agcactacaa actgctggag 961 cagacgtcag gggttcaaga cgatgaaaaa atggaagact taagttcaaa atatgactca 1021 gtttacattc atccgagcac ttttgattta tctctacttt cggcgggttc aactatagac 1081 ttggtggaaa atgttgttac tggtgctgtg caaaacggaa tggcaattat acgaccacca 1141 ggacatcatg ccatgaaagc tgaatttaat ggctactgtt ttttcaacaa cgttgccatt 1201 gccacacaat atgccttgga tgtattaaaa gtgaataaaa ttatgataat cgattgggat 1261 gtgcaccatg gccagggtac ccaaagattt ttctatcatg atcctagggt attatatttt 1321 tctattcatc gctttgaaca tggcacctat tggcctaatc taaaggaatc cgattttgat 1381 gccataggct atggtcctgg cttgggttat aattttaact tacctttgaa caaaactggc 1441 atgactaatg gagactattt ggccatcttc caacaaatac taatacctgt ggcatgtgaa 1501 ttccagcctg agttgataat tatctctgcg ggatatgatg ccgctttggg ttgccctgaa 1561 ggcgaaatgg aagtaacacc tgcattttat tcgcatctta taaatccctt gctaaagttg 1621 gcgaattcac gtttggccgt tgttctagag ggaggttatt gcttggattc cttggcagaa 1681 ggtgctgcct taacattgag ggcgcttttg ggagaaccat gtccttcttt agtggagaaa 1741 ttggatcctc cctgtccctc tatacaagag tcaattctta attgcattta cgctcatcgt 1801 tcatattgga aatgcttgca agcacaagac acatatacaa tggaggacat aaacaatgtc 1861 aatcctcaaa tcaatttaca taaagttagt agggtattta tagggggacc accattgcct 1921 gaacgcttcc ccacccgagg tactggcccc aatattcccc tggaggtggt ggagcgtaat 1981 gcacaacgtt tgaagagatt aaaagcggaa acaaaactct tttcaccaaa agtgcgagtc 2041 tgctatgtat acgatgaact aatgttgcaa catgccaata cctacgaaga gggtcatcct 2101 gagcaacctg aacgcataag taaaatttac gaaatgcatc aagactacaa actattggaa 2161 cgcatgcaaa aactgccttc tcgctcggca acgacaaatg aaatttgttt ggcccacaca 2221 cgatctcacc tgaattctat acggcgcata ggggagaagg acgaattgca aaacatgggg 2281 gccaaattca attccgtcta ttttcatcct aagacattcg agtgtgcgac tgtagctgcg 2341 ggctcagtgc tgcaggtggt tgacaaagtt gttaagggag aagctagaag tggtgtttgc 2401 attgttagac ccccaggcca tcatgcagaa tcagatgttc cgcatggctt ttgcatattc 2461 aataatgtgg caattgccgc ccagtatgcc atcaatgacc atggcttaaa cagggtgtta 2521 attgtcgact gggatgtgca tcatggtaat ggtactcagc atatatttga atccaatccc 2581 caggtacttt acataagtgt gcatcggtat gacaatgcaa cattttttcc aaaaagtaaa 2641 gatggtgatt atgattcggt gggtaaaggt gctggggttg gtttcaatgt gaacattccc 2701 tggaacaaga aagggatggg cgatttggaa tatatcatgg ctttccagca tattatcatg 2761 ccaattgctt atgaatttga tcctcaattg gtcttggtat cagctggatt tgatgctgcc 2821 ataggtgacc cccttggtgg ctgtaaagta acacccgaag cttatggttt attcacacac 2881 tggctatcgg ctttggctaa tggccgcatc atagtttgcc ttgagggtgg ctacaatgtc 2941 aattccatat cgtatgccat gacaatgtgc accaaatcct tgttgggtga tcccatacca 3001 tcagtgcaat taaacggcag tcttatgcgt ccgcccacag tagcctatct cagctgcatg 3061 gaaaccttgc aaaattgcat tggagttcaa catcgctatt ggaaaagtct aacctttggc 3121 aaacggctgc cacaggtgtc gggagaaaat aacaatgagg attttctttc tgctacttta 3181 caaaatttag atattacaag ggatgacgtt caaggagcag ctggtggttc cggcgactcc 3241 ggtcagaata tatctttaga ggcaagtggc agcaaaccga aggtaaaagt caaaactcta 3301 accgaatatc tcacagagca catgcaggct tttgaaaata atgaaatgtt tgctgtggtg 3361 ccattaaaga attgtcctca tttgtcccag ttgcatcccg aagatgcgcc aaaatacaac 3421 aaaagacatt tgtacctaca tacaaaagcc aaatgttttc tcgaatgcca tttatcgctg 3481 ttaggacaat atttattgcc acgacaacta ttttatttta taaaaattac ctttagggat 3541 ttggcaaagg tttggaggaa tttacatttc tctagggtgt atgtatgttc tcttgtttgt 3601 aataaatttt agcacctctg tttgaaagac atatagaaat gctttaaact gttaaattaa 3661 ataacgcacc cagtcatgag tgtaataaat aattcattaa tggttgtggg acgattcata 3721 tcttagtggt taactcattg cgttgtgact aacccacatc aaaacttata tcatcataac 3781 attttgtttg tatcattttt ttgcgtgtgt aatcaaattt ctttttaaaa tgttctaaat 3841 ccgtttggta ttatggctta cattgtaaag tattggcaag tgtacaaata agtggatata 3901 ttcccaatat gccaatgcaa agcttaatgc atacctattt atttgcggtg ttttacaaat 3961 taagagaaag gagtcgggta gcgaagaaag tattcacacg atgcatgaaa aattaacaat 4021 gggttggggg tggggttggt atatacatat gtataaaaac aaaacaaacc aaatctccaa 4081 atcctcaaat cggacaaaga aagtggctca agaagttaaa tcgaaggtcc acttcgtatg 4141 gaagccacat cgtaatctga agcgataggg caatccccaa cgacccttat cacaatacca 4201 tggcagcccg ttgtacgtac cggattgacc tgatgaagtc cttcaccggc aagggctgcc 4261 gcctcagtgt acaacgcact gctacaacaa caactcttat caataaaaag tattttcgcg 4321 aaatttcaag cagattcctt tgactggtat ggtgattgcg gccgacggac ggacattgct 4381 agatcaacga tcaagaataa atatatgtat gtactt