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PREDICTED: Stomoxys calcitrans protein YIPF1 (LOC106087569), mRNA.


LOCUS       XM_013252656            1308 bp    mRNA    linear   INV 02-SEP-2023
ACCESSION   XM_013252656
VERSION     XM_013252656.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013252656.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1308
                     /gene="LOC106087569"
                     /note="protein YIPF1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:106087569"
     CDS             154..1185
                     /gene="LOC106087569"
                     /codon_start=1
                     /product="protein YIPF1"
                     /protein_id="XP_013108110.1"
                     /db_xref="GeneID:106087569"
                     /translation="MQSDDLLQFKDYTNTPSTSSPPAQINVNSPTHSTGSGSGGAGRQ
                     RGDPLSDLIYDMSNSAQILSGGMSSSGGGGGGKNTGLPEPATATPSKTSFLTIEYYQR
                     FFDVDTLVVLERIANSMIPKRAPSNYLKSSIGQNPDLYGPFWITTTLIFCIAISGNIA
                     NYLQHQSETYQWHYNFHLVSYAATCIFIYANFLPGALWALFKYSLKPLEEGLETENAD
                     YTPSLLSLMCVYGYSLAIYIPVSILWVIQLSILQWLLVITAALLSGSVLIAVLTPALR
                     NSKYSLFLIIGILAAHFLLAAGFMLYFFHVPSSGTVGAHQTTMEAIKQPVKEVLEVTK
                     AVVGNITNK"
     misc_feature    520..1053
                     /gene="LOC106087569"
                     /note="Yip1 domain; Region: Yip1; pfam04893"
                     /db_xref="CDD:461468"
     polyA_site      1308
                     /gene="LOC106087569"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacaccaaat ccaatgacag cacacagctg actgaaaact aatcgacgtg ttaagccaat
       61 ggaaaaaata aaatataatt aaaatttata ataataaaac acttgaaata agtagttaaa
      121 agaaaaggca aaggactgaa ataacacaac atcatgcagt cagatgactt attgcagttt
      181 aaggattaca ccaatacccc tagcaccagc agtcctccag cacaaataaa tgtcaattca
      241 ccaacgcatt caacgggctc cggttctggt ggagctgggc ggcagcgtgg tgatcccctt
      301 tccgatttaa tctatgacat gagcaattca gcgcaaattc tttccggtgg catgtcgtca
      361 agtggtggag gtggcggtgg caaaaacact ggcttaccag agcctgccac ggcaacgccc
      421 agtaaaactt cattcctgac cattgaatat tatcaaagat tctttgatgt tgataccttg
      481 gtagtactgg aacgtattgc caattctatg atacccaaaa gggctcccag taattattta
      541 aaatcgtcaa ttggacagaa tccggatttg tatggaccat tttggataac aacgactttg
      601 atcttctgca ttgccattag cggcaatatt gccaattatc ttcagcatca aagtgaaact
      661 taccagtggc attataactt ccatttggtc tcctatgcag ccacttgtat atttatctat
      721 gcaaacttct tgccaggagc tttatgggcc ctcttcaaat acagtttgaa gcccttggaa
      781 gagggtcttg aaacggaaaa tgctgattat actccatctt tattaagtct aatgtgcgtt
      841 tatggatact cactggccat atacattcca gtatctattc tatgggttat tcagctttct
      901 atactccaat ggcttctggt cattacagcc gccttattgt ccggctctgt attgatagct
      961 gtactcactc cagctttgag aaattccaaa tattctttat ttttaattat tggcatatta
     1021 gctgctcatt tcctgttagc tgccggtttt atgctatatt tcttccatgt acccagtagt
     1081 ggtacagtcg gtgcccatca gaccaccatg gaggccataa aacaaccagt caaagaagta
     1141 ctagaagtaa ccaaagctgt tgttggcaac ataaccaaca aataaaatgt gaggtgtttg
     1201 ttcttctagg tttaaacaac ttctagtttt aagtattata tcagtagacg gcagaaaact
     1261 aagaaaaata aatcaaataa aaaaatggaa aaatgtccca aacgataa