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LOCUS XM_013252653 4750 bp mRNA linear INV 02-SEP-2023 corkscrew (LOC106087566), transcript variant X2, mRNA. ACCESSION XM_013252653 VERSION XM_013252653.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013252653.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4750 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4750 /gene="LOC106087566" /note="tyrosine-protein phosphatase corkscrew; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins" /db_xref="GeneID:106087566" CDS 1268..4204 /gene="LOC106087566" /codon_start=1 /product="tyrosine-protein phosphatase corkscrew isoform X2" /protein_id="XP_013108107.2" /db_xref="GeneID:106087566" /translation="MLNKYLNKISNAVQHKNKENLKNHHHNDCAENYYSSSLPVPAAA HINNQQARNLEYERAIAASYAALSSTPKKKKPKINVHNTNNTKTCLSSNELAIIIKGS ESSSSSSNKHHTLKESPHHNIYACTPTLRETKSSLTLHLSTSPSSGIYSNVSSSYGSA SGSMQAASSPSPSASSSSAASSSSSSSTESLNSSAASETPYSSNVSTPSSLPSGNPVW PVSQRLHLPHELAMLRIRMWIFPWFHGNLSGKEGEKLLLERGKNGSFLVRESQSKPGD FVLSVRTDEKVTHVMIRWQDNKYDVGGGEPFKTLSELIEHYKRNPMVETCGTVVHLRQ PFNATRITAAGINARVEQLVKGGFWEEFEALQQDSRDMFSRIEGYKAENRNKNRYRNI LPYDHTRVKLNDVDHSISGAEYINANYIRLPTDGEQNNMNASQESLNAMVPSCPACTA AQIQKNCPNCQLLNKTCVQCAVKTATLPYSNCATCNKKADNLNKHKRSESLTNNALIA NCNGLSLQQQQQRTGGVAGTSAANGGSSGSGVIGSSRPLNKKNSNDLTEREMFKTYIA TQGCLSNTVADFWNMIWQENTRVIVMTTKEFERGKNKCAKYWPDEGQTKQFGPAKIQC ISESSTSDYTLREFLFSWRDQPERRIFHYHFQVWPDHGVPADPGCVLNFLQDVNAKQG QIIHSGDKPGPICVHCSAGIGRTGTFIVIDMILDQIDKNGLDTEIDIQRTIQMVRAQR SGLVQTEAQYKFVYYAVQHYIQTVIQRKRAEEQSIQVGREYTNIKYTGEIGNEAQRSP LPPIVSLASKQQQQQQQANASATSCSNNSSSSISNAADNNQASKSNFIKMPLASPTTP SSRHKFTQAPSTQPQPIYSNDIFQITQKHIEAHHNASQNHHHHHGPQQSPQMVVGHQQ TQAQQLVHQHTQQASSSSSSSSSAAAGLAGATTASSAGTAYENFSKDMMRHHFAVPPP TPPRKT" polyA_site 4750 /gene="LOC106087566" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atttacgttc atacagtcga agtgttgaga agtgttctta gcttatcgcg gaaacgcgtt 61 ttctcaccac gcacaaaata caagcaatca acaacgatta ccaccaaata aaaaagacgt 121 gttgttttca taacgaacta caaattgagt tgaattgaac tgatttagaa aaattttgtt 181 ttataagttt tgcaatattt tcttcaaaga aaagttatcg gaaaattaaa aaataagtga 241 aaatttttcc ttactaacta acaaggaaca aaacgccacg gtcgttttgt attgcaaaaa 301 ataagtaaaa attgatcgat ttgtaattga agttaaacaa gtttccttta tgggaaaaga 361 aaaagtgtga aaaaattgtt ttctcaacca aaccaaagca aaacaaaagc aaatcccaca 421 aatcagtcaa gccaaatata acgaaaaatt taaaaaaata cacttcgtcg tatgcgtata 481 aaattcaaat gaaaaaaatc aaaactggtg tttgaaaaaa aaaaaaaaaa caaggaaaat 541 attccaaaac tatttgagtg tgaataaatt catttatgtg gtcaatatgc attcattgta 601 cacgattgag tctttaatgt gtgcccatat aaatcaagaa gaagaagcaa aaaatttaca 661 acaaccccaa gaaattgcta aaaaatcccc caaaaaggaa aaccctttga aaaactgtca 721 caaaaagttg tacaaagctt tgaaggaaaa atacgataat tccaccaaga aagctctcaa 781 acagtaacaa agactagctg ttgaaaatcc caacataagt gacattttat tgaagtttat 841 tgcaaataaa aaagtcaata acttatcaaa agactgttaa tacaacgaat tttgaaaata 901 gaaaactacg cttaagaaaa gtcattactc tcaaaagttt tctaaactaa ataccacaac 961 gaattagaaa tattttgcaa aatctatgca agaaaagtga aattataaca tttcagtttg 1021 ccaaacaaaa ccaaaaaaaa gaaagtattt ttgctaaaaa aaaaccctaa gaaggaaaaa 1081 attaaaaatc aagcacgttt cctctaaagg ccattatttg tgctaaaacg aaatcaatta 1141 gctagaaaac tagtcacaac aatcttacaa aaaagaaacg tgaaactctt cattaacgtt 1201 gtcgaaatcg ttatcgttat ctcttcattc attttaacac ccacaacgac tgcccttatt 1261 ttcaaacatg ttgaataaat atttaaacaa aatttccaat gctgtacagc ataaaaacaa 1321 agaaaatctc aaaaatcatc atcacaacga ttgtgcagaa aattattact cctcctcgct 1381 gccagtgcct gctgctgccc atattaacaa tcaacaagct cgcaatttgg aatatgaacg 1441 tgccatagcg gcttcatatg ccgccttgtc ttctaccccc aagaagaaga agcccaaaat 1501 taatgttcac aataccaata ataccaaaac ttgccttagc tccaatgaac tggccattat 1561 tattaagggt agcgaatcat catcatcatc gtcgaataag caccacactc tcaaggaatc 1621 gcctcatcat aatatttatg cctgtactcc aactttaagg gaaacaaaaa gttccttgac 1681 gctgcattta tccacctcac catcgtcggg catatattcc aatgtttcct catcatatgg 1741 ctcggcaagt ggttctatgc aggcagcatc atcaccctca ccatctgcgt cctcatcatc 1801 ggcggcttca tcttcctcct cctcctcaac agaatcttta aattcatcgg cagccagcga 1861 aactccatac tcatcgaatg tctcaacacc ctcatcatta ccttccggca atcctgtatg 1921 gccagtgtcc cagagacttc atttgcctca tgaattggca atgctgcgca taagaatgtg 1981 gatatttcca tggtttcacg gcaatctttc tggcaaagaa ggtgaaaaat tgttattgga 2041 acgtggaaag aatggttcat ttctggtgcg tgaatcacaa tcgaaaccag gcgattttgt 2101 tttatccgta aggacggacg aaaaagttac tcatgtcatg atacgttggc aggataacaa 2161 atacgatgtt ggcggaggtg aaccattcaa gactctatcc gaattaattg aacactacaa 2221 acgtaatcca atggtggaga cctgtggtac ggttgtccat ctgcgacagc catttaatgc 2281 tacacgcatc actgcagctg gcatcaatgc ccgagtggag caattggtta agggtggctt 2341 ttgggaagaa tttgaagctt tacaacaaga cagtcgtgat atgttctctc gcattgaagg 2401 ctacaaagcg gagaatcgca ataaaaatcg ttatagaaac attttaccat atgatcacac 2461 ccgtgtcaaa ttaaatgatg tcgatcacag catatcgggc gctgaatata tcaatgccaa 2521 ttatatacgc ttacccaccg atggtgaaca gaacaacatg aatgcttcac aagaaagcct 2581 aaacgccatg gttccctcct gtccggcctg tacagctgct caaattcaaa agaattgtcc 2641 caactgccag ttgttgaaca aaacctgtgt ccagtgtgcg gtgaagacag caacgctgcc 2701 ctatagcaat tgtgctacat gcaacaaaaa ggccgacaat ttgaataagc acaaacgcag 2761 tgaatcatta accaataatg ctttaattgc caattgcaat ggcttatccc tgcagcagca 2821 acaacaacgt acgggaggag tagctggaac atcggctgcc aatggtggca gtagtggtag 2881 cggtgtcatt ggttcttcac gtcccctcaa caaaaagaac agcaatgatc tgacggaacg 2941 tgaaatgttc aaaacctaca tagccaccca gggttgtttg tccaatacgg tggcagattt 3001 ctggaatatg atatggcagg agaatacacg tgtcattgtg atgacaacca aagaatttga 3061 acgtggcaaa aataaatgtg ccaaatattg gcccgacgag ggacaaacca aacaattcgg 3121 acctgccaaa attcaatgta tctcagagag ttccacaagt gattatacgc taagggaatt 3181 cctgttctca tggcgtgacc agccagagcg acgtatattc cattatcatt ttcaagtgtg 3241 gcccgatcat ggggtgcctg cggatcctgg atgtgtattg aatttcttgc aagatgtcaa 3301 tgccaaacag ggacagataa tacattcggg tgataagccg ggtcccatat gtgtacattg 3361 ttctgcaggc attggtcgta ctggcacttt tatagtgatt gatatgattt tggatcaaat 3421 tgataagaat ggtttggata ctgaaatcga tattcaacgc acaatacaaa tggtacgagc 3481 ccaacgttct ggtctagtac aaactgaggc ccagtataaa ttcgtttatt atgctgtcca 3541 acattacata caaacggtga tacaacgcaa aagggccgag gaacaaagta tacaagttgg 3601 acgggaatat accaatataa aatataccgg tgaaattggt aatgaagcac aaagatctcc 3661 cttaccacct attgtaagtt tagctagtaa acagcagcaa caacagcagc aggccaatgc 3721 ctcagcaaca agttgtagca ataatagtag tagcagcatt agtaatgctg ccgacaacaa 3781 tcaagcatcg aaatcaaatt ttattaaaat gcccttggca tcacccacaa caccaagcag 3841 ccgtcataaa tttacgcagg caccatcgac acagccacag ccgatctata gcaacgacat 3901 atttcaaata acacaaaaac acatcgaagc ccatcataat gcaagccaaa atcatcatca 3961 tcatcatggt ccacaacagt cgccccaaat ggtggtgggg catcagcaaa cacaagctca 4021 gcaattggta caccagcata cacaacaagc ctcgtcgtca tcatcatcct catcatcagc 4081 agcagcagga ttagcaggag caacgacggc gtcgtcggcg ggtacagcct acgaaaactt 4141 ttccaaagac atgatgaggc atcattttgc ggtgcctccc cctacaccgc ctcgtaaaac 4201 atgacaatta aagttttaat gctattttct ttgtaaaatt tgattgattt cctcaaaaaa 4261 ctacctacat actccttgga aagtaaactc tctctcctct tgtaggcttt ccccccaaaa 4321 aacctgctaa caaatcaaaa acaaaccaga aacctattgc atattgtatt tttaatgagg 4381 aaaacaattt tccgccactt gaattgattg attgagtgtt gtgtctaatt ttaaaatttt 4441 gcaaagtaat ctacgtttct tgttttcata tgcggcggta gtagcatttt tttgttagaa 4501 tttaaaagaa aaaaacacac ctaattctgc ctccccctac tgctgggtaa tgcaaacttt 4561 tttgttttgc cagcttcttt tgttgagata agaaatcttt gacacataga gagactttat 4621 aagttttatt tttttaagtt aacatttgca taactatttc ttttgatata aggcgaattc 4681 gttttctgct tcattgtgat attcccaata atttttgttt tataatttaa tatgaaaaaa 4741 aaaaacaaaa