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LOCUS XM_013252652 4808 bp mRNA linear INV 02-SEP-2023 corkscrew (LOC106087566), transcript variant X1, mRNA. ACCESSION XM_013252652 VERSION XM_013252652.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013252652.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4808 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4808 /gene="LOC106087566" /note="tyrosine-protein phosphatase corkscrew; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins" /db_xref="GeneID:106087566" CDS 1267..4212 /gene="LOC106087566" /codon_start=1 /product="tyrosine-protein phosphatase corkscrew isoform X1" /protein_id="XP_013108106.2" /db_xref="GeneID:106087566" /translation="MLNKYLNKISNAVQHKNKENLKNHHHNDCAENYYSSSLPVPAAA HINNQQARNLEYERAIAASYAALSSTPKKKKPKINVHNTNNTKTCLSSNELAIIIKGS ESSSSSSNKHHTLKESPHHNIYACTPTLRETKSSLTLHLSTSPSSGIYSNVSSSYGSA SGSMQAASSPSPSASSSSAASSSSSSSTESLNSSAASETPYSSNVSTPSSLPSGNPVW PVSQRLHLPHELAMLRIRMWIFPWFHGNLSGKEGEKLLLERGKNGSFLVRESQSKPGD FVLSVRTDEKVTHVMIRWQDNKYDVGGGEPFKTLSELIEHYKRNPMVETCGTVVHLRQ PFNATRITAAGINARVEQLVKGGFWEEFEALQQDSRDMFSRIEGYKAENRNKNRYRNI LPYDHTRVKLNDVDHSISGAEYINANYIRLPTDGEQNNMNASQESLNAMVPSCPACTA AQIQKNCPNCQLLNKTCVQCAVKTATLPYSNCATCNKKADNLNKHKRSESLTNNALIA NCNGLSLQQQQQRTGGVAGTSAANGGSSGSGVIGSSRPLNKKNSNDLTEREMFKTYIA TQGCLSNTVADFWNMIWQENTRVIVMTTKEFERGKNKCAKYWPDEGQTKQFGPAKIQC ISESSTSDYTLREFLFSWRDQPERRIFHYHFQVWPDHGVPADPGCVLNFLQDVNAKQG QIIHSGDKPGPICVHCSAGIGRTGTFIVIDMILDQIDKNGLDTEIDIQRTIQMVRAQR SGLVQTEAQYKFVYYAVQHYIQTVIQRKRAEEQSIQVGREYTNIKYTGEIGNEAQRSP LPPIVSLASKQQQQQQQANASATSCSNNSSSSISNAADNNQASKSNFIKMPLASPTTP SSRHKFTQAPSTQPQPIYSNDIFQITQKHIEAHHNASQNHHHHHGPQQSPQMVVGHQQ TQAQQLVHQHTQQASSSSSSSSSAAAGLAGATTASSAGTGKQVSSRPGLLKLLTPVIF QPTKTFPKT" polyA_site 4808 /gene="LOC106087566" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttacgttca tacagtcgaa gtgttgagaa gtgttcttag cttatcgcgg aaacgcgttt 61 tctcaccacg cacaaaatac aagcaatcaa caacgattac caccaaataa aaaagacgtg 121 ttgttttcat aacgaactac aaattgagtt gaattgaact gatttagaaa aattttgttt 181 tataagtttt gcaatatttt cttcaaagaa aagttatcgg aaaattaaaa aataagtgaa 241 aatttttcct tactaactaa caaggaacaa aacgccacgg tcgttttgta ttgcaaaaaa 301 taagtaaaaa ttgatcgatt tgtaattgaa gttaaacaag tttcctttat gggaaaagaa 361 aaagtgtgaa aaaattgttt tctcaaccaa accaaagcaa aacaaaagca aatcccacaa 421 atcagtcaag ccaaatataa cgaaaaattt aaaaaaatac acttcgtcgt atgcgtataa 481 aattcaaatg aaaaaaatca aaactggtgt ttgaaaaaaa aaaaaaaaac aaggaaaata 541 ttccaaaact atttgagtgt gaataaattc atttatgtgg tcaatatgca ttcattgtac 601 acgattgagt ctttaatgtg tgcccatata aatcaagaag aagaagcaaa aaatttacaa 661 caaccccaag aaattgctaa aaaatccccc aaaaaggaaa accctttgaa aaactgtcac 721 aaaaagttgt acaaagcttt gaaggaaaaa tacgataatt ccaccaagaa agctctcaaa 781 cagtaacaaa gactagctgt tgaaaatccc aacataagtg acattttatt gaagtttatt 841 gcaaataaaa aagtcaataa cttatcaaaa gactgttaat acaacgaatt ttgaaaatag 901 aaaactacgc ttaagaaaag tcattactct caaaagtttt ctaaactaaa taccacaacg 961 aattagaaat attttgcaaa atctatgcaa gaaaagtgaa attataacat ttcagtttgc 1021 caaacaaaac caaaaaaaag aaagtatttt tgctaaaaaa aaaccctaag aaggaaaaaa 1081 ttaaaaatca agcacgtttc ctctaaaggc cattatttgt gctaaaacga aatcaattag 1141 ctagaaaact agtcacaaca atcttacaaa aaagaaacgt gaaactcttc attaacgttg 1201 tcgaaatcgt tatcgttatc tcttcattca ttttaacacc cacaacgact gcccttattt 1261 tcaaacatgt tgaataaata tttaaacaaa atttccaatg ctgtacagca taaaaacaaa 1321 gaaaatctca aaaatcatca tcacaacgat tgtgcagaaa attattactc ctcctcgctg 1381 ccagtgcctg ctgctgccca tattaacaat caacaagctc gcaatttgga atatgaacgt 1441 gccatagcgg cttcatatgc cgccttgtct tctaccccca agaagaagaa gcccaaaatt 1501 aatgttcaca ataccaataa taccaaaact tgccttagct ccaatgaact ggccattatt 1561 attaagggta gcgaatcatc atcatcatcg tcgaataagc accacactct caaggaatcg 1621 cctcatcata atatttatgc ctgtactcca actttaaggg aaacaaaaag ttccttgacg 1681 ctgcatttat ccacctcacc atcgtcgggc atatattcca atgtttcctc atcatatggc 1741 tcggcaagtg gttctatgca ggcagcatca tcaccctcac catctgcgtc ctcatcatcg 1801 gcggcttcat cttcctcctc ctcctcaaca gaatctttaa attcatcggc agccagcgaa 1861 actccatact catcgaatgt ctcaacaccc tcatcattac cttccggcaa tcctgtatgg 1921 ccagtgtccc agagacttca tttgcctcat gaattggcaa tgctgcgcat aagaatgtgg 1981 atatttccat ggtttcacgg caatctttct ggcaaagaag gtgaaaaatt gttattggaa 2041 cgtggaaaga atggttcatt tctggtgcgt gaatcacaat cgaaaccagg cgattttgtt 2101 ttatccgtaa ggacggacga aaaagttact catgtcatga tacgttggca ggataacaaa 2161 tacgatgttg gcggaggtga accattcaag actctatccg aattaattga acactacaaa 2221 cgtaatccaa tggtggagac ctgtggtacg gttgtccatc tgcgacagcc atttaatgct 2281 acacgcatca ctgcagctgg catcaatgcc cgagtggagc aattggttaa gggtggcttt 2341 tgggaagaat ttgaagcttt acaacaagac agtcgtgata tgttctctcg cattgaaggc 2401 tacaaagcgg agaatcgcaa taaaaatcgt tatagaaaca ttttaccata tgatcacacc 2461 cgtgtcaaat taaatgatgt cgatcacagc atatcgggcg ctgaatatat caatgccaat 2521 tatatacgct tacccaccga tggtgaacag aacaacatga atgcttcaca agaaagccta 2581 aacgccatgg ttccctcctg tccggcctgt acagctgctc aaattcaaaa gaattgtccc 2641 aactgccagt tgttgaacaa aacctgtgtc cagtgtgcgg tgaagacagc aacgctgccc 2701 tatagcaatt gtgctacatg caacaaaaag gccgacaatt tgaataagca caaacgcagt 2761 gaatcattaa ccaataatgc tttaattgcc aattgcaatg gcttatccct gcagcagcaa 2821 caacaacgta cgggaggagt agctggaaca tcggctgcca atggtggcag tagtggtagc 2881 ggtgtcattg gttcttcacg tcccctcaac aaaaagaaca gcaatgatct gacggaacgt 2941 gaaatgttca aaacctacat agccacccag ggttgtttgt ccaatacggt ggcagatttc 3001 tggaatatga tatggcagga gaatacacgt gtcattgtga tgacaaccaa agaatttgaa 3061 cgtggcaaaa ataaatgtgc caaatattgg cccgacgagg gacaaaccaa acaattcgga 3121 cctgccaaaa ttcaatgtat ctcagagagt tccacaagtg attatacgct aagggaattc 3181 ctgttctcat ggcgtgacca gccagagcga cgtatattcc attatcattt tcaagtgtgg 3241 cccgatcatg gggtgcctgc ggatcctgga tgtgtattga atttcttgca agatgtcaat 3301 gccaaacagg gacagataat acattcgggt gataagccgg gtcccatatg tgtacattgt 3361 tctgcaggca ttggtcgtac tggcactttt atagtgattg atatgatttt ggatcaaatt 3421 gataagaatg gtttggatac tgaaatcgat attcaacgca caatacaaat ggtacgagcc 3481 caacgttctg gtctagtaca aactgaggcc cagtataaat tcgtttatta tgctgtccaa 3541 cattacatac aaacggtgat acaacgcaaa agggccgagg aacaaagtat acaagttgga 3601 cgggaatata ccaatataaa atataccggt gaaattggta atgaagcaca aagatctccc 3661 ttaccaccta ttgtaagttt agctagtaaa cagcagcaac aacagcagca ggccaatgcc 3721 tcagcaacaa gttgtagcaa taatagtagt agcagcatta gtaatgctgc cgacaacaat 3781 caagcatcga aatcaaattt tattaaaatg cccttggcat cacccacaac accaagcagc 3841 cgtcataaat ttacgcaggc accatcgaca cagccacagc cgatctatag caacgacata 3901 tttcaaataa cacaaaaaca catcgaagcc catcataatg caagccaaaa tcatcatcat 3961 catcatggtc cacaacagtc gccccaaatg gtggtggggc atcagcaaac acaagctcag 4021 caattggtac accagcatac acaacaagcc tcgtcgtcat catcatcctc atcatcagca 4081 gcagcaggat tagcaggagc aacgacggcg tcgtcggcgg gtacaggtaa gcaggtctcg 4141 tcacgacccg gtttgctcaa attgttgact cccgtcattt ttcagcctac gaaaactttt 4201 ccaaagacat gatgaggcat cattttgcgg tgcctccccc tacaccgcct cgtaaaacat 4261 gacaattaaa gttttaatgc tattttcttt gtaaaatttg attgatttcc tcaaaaaact 4321 acctacatac tccttggaaa gtaaactctc tctcctcttg taggctttcc ccccaaaaaa 4381 cctgctaaca aatcaaaaac aaaccagaaa cctattgcat attgtatttt taatgaggaa 4441 aacaattttc cgccacttga attgattgat tgagtgttgt gtctaatttt aaaattttgc 4501 aaagtaatct acgtttcttg ttttcatatg cggcggtagt agcatttttt tgttagaatt 4561 taaaagaaaa aaacacacct aattctgcct ccccctactg ctgggtaatg caaacttttt 4621 tgttttgcca gcttcttttg ttgagataag aaatctttga cacatagaga gactttataa 4681 gttttatttt tttaagttaa catttgcata actatttctt ttgatataag gcgaattcgt 4741 tttctgcttc attgtgatat tcccaataat ttttgtttta taatttaata tgaaaaaaaa 4801 aaacaaaa