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PREDICTED: Stomoxys calcitrans eukaryotic translation initiation


LOCUS       XM_013252649            1080 bp    mRNA    linear   INV 02-SEP-2023
            factor 3 subunit F-1 (LOC106087564), mRNA.
ACCESSION   XM_013252649
VERSION     XM_013252649.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013252649.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1080
                     /gene="LOC106087564"
                     /note="eukaryotic translation initiation factor 3 subunit
                     F-1; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 13 Proteins"
                     /db_xref="GeneID:106087564"
     CDS             47..889
                     /gene="LOC106087564"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 3
                     subunit F-1"
                     /protein_id="XP_013108103.1"
                     /db_xref="GeneID:106087564"
                     /translation="MSGLNLVVKVHPVVLFQVVDAYERRNADSHRVIGTLLGSVDKGV
                     VEVTNCFCVPHKEHDDQVEAELSYALDLYDLNRKVNPNENVVGWWATGNEVTNHSSVI
                     HEYYARECNNPVHLTVDTSLQGGRMGLCAYVCIPLGVPGGKTGCMFTPIPVEMTCYEP
                     ETVGLKLLQKTVGHSALHRTKTVSPMLDLAQIAEASTKLQSLLELILKYVEDVIAHKQ
                     PPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRDLLMVITLSNLIKTQLQLNEKLTY
                     LPTN"
     misc_feature    68..868
                     /gene="LOC106087564"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains without
                     catalytic isopeptidase activity, found in eIF3f; Region:
                     MPN_eIF3f; cd08064"
                     /db_xref="CDD:163695"
     polyA_site      1080
                     /gene="LOC106087564"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atagttcttt ttttcgcatc aaatttacaa tttgcaacgc cacgcaatgt ctggtcttaa
       61 tttggtggta aaagtgcatc ctgtagtgct gttccaggtg gtagatgcct atgaaaggcg
      121 taatgctgac tcccatcgtg ttattggcac cttattgggc tctgtcgata aaggtgttgt
      181 tgaggtgacc aattgctttt gtgtacctca caaggaacat gatgatcaag tggaagccga
      241 attaagttat gccttggatt tgtatgactt aaatcgcaaa gtaaatccca atgaaaatgt
      301 tgtgggttgg tgggccactg gcaacgaagt gaccaatcac agctctgtca ttcacgaata
      361 ctatgcccgt gaatgcaaca atcctgtcca tttgactgtg gatacttcac tgcagggtgg
      421 tcgtatgggt ttgtgtgcct acgtttgtat accattggga gtacccggtg gcaaaactgg
      481 ttgtatgttc actcccattc ctgtggagat gacatgctac gaacctgaaa ctgtcggctt
      541 gaaattgctg caaaagaccg tcggtcattc ggctctacac cgcacaaaaa cagtatcgcc
      601 tatgttggat ttggcacaaa ttgccgaggc ttcaacaaaa ctacaaagtc ttttggagct
      661 tattcttaag tacgtggaag atgttattgc tcacaaacaa ccaccagata atgctgtagg
      721 tcgtcaactc ttggacctca tccactcggt gccacacatg acccatgaac aattcacaca
      781 aatgtttaat gccaatgtac gcgatttgtt aatggtcatc actttgtcca acctcattaa
      841 gacacaactt caattgaacg agaaattaac ttatttgcca acaaattgag tttattaagc
      901 tatacgtaca tacttatttg agatagtttt attatttgaa gataaagcgt aaggtcgttg
      961 cggcgaaagt aatagttacc gaagaggaca ttagtgtggc atttgttttt gtaaagaaga
     1021 aagaaatcac ctgtattaat ggaaaataaa atttttatgc gcttttgtct acttcacaaa