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LOCUS XM_013252486 4100 bp mRNA linear INV 02-SEP-2023 homolog 3 (LOC106087444), transcript variant X1, mRNA. ACCESSION XM_013252486 VERSION XM_013252486.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013252486.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4100 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4100 /gene="LOC106087444" /note="mothers against decapentaplegic homolog 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins" /db_xref="GeneID:106087444" CDS 303..1757 /gene="LOC106087444" /codon_start=1 /product="mothers against decapentaplegic homolog 3" /protein_id="XP_013107940.1" /db_xref="GeneID:106087444" /translation="MLPFTPQVVKRLLALKKCNEDSVEGKWSEKAVKNLVKKIKKNSS LEELERAISTQNPNTRCVTLPRSKPTASGENLRKGLPHVIYCRLWRWPDLQSQNELKA LDHCEYAFHLRKDEICINPYHYKKLELSILVPKSLPTPPDSIVDYPLDNHTHQIPNNT EYNAATIRSASLSPPQYMDIGRSQQQQHQYHQQQQRSPASFFTGNMSGASTQQQQQQQ ITTNNLPPGACNMDSQSSVLSVGSNSMPNTGTPPPGYMSEDGDPVDPNDNMNMTRLTP PAESAPVMYHEPAFWCSISYYELNTRVGETFHASQPSITVDGFTDPSNSERFCLGLLS NVNRNEVVEQTRRHIGKGVRLYYIGGEVFAECLSDSSIFVQSPNCNQRYGWHPATVCK IPPGCNLKIFNNQEFAALLSQSVSQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTS TPCWIELHLNGPLQWLDRVLTQMGSPRMPCSSMS" misc_feature 321..689 /gene="LOC106087444" /note="N-terminal Mad Homology 1 (MH1) domain of receptor regulated SMADs; Region: MH1_R-SMAD; cd10488" /db_xref="CDD:199812" misc_feature order(390..392,402..404,411..413,501..506,513..527, 534..536,591..593) /gene="LOC106087444" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:199812" misc_feature order(483..485,618..620,654..656,669..671) /gene="LOC106087444" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:199812" misc_feature 1149..1721 /gene="LOC106087444" /note="C-terminal Mad Homology 2 (MH2) domain in SMAD2 and SMAD3; Region: MH2_SMAD_2_3; cd10985" /db_xref="CDD:199826" misc_feature order(1200..1202,1215..1220,1224..1226,1257..1271, 1281..1283,1293..1295,1302..1304,1308..1313,1329..1334, 1338..1346,1353..1355,1560..1562,1569..1571,1578..1580, 1590..1592,1596..1598,1608..1616,1629..1631,1635..1637, 1647..1649,1662..1664,1668..1670,1674..1676,1680..1682, 1689..1694,1698..1703,1710..1715) /gene="LOC106087444" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:199826" ORIGIN 1 aataatactc gtcacagtga tctggttaga agcgactttt atttttcttg caaaattgat 61 taaaaaacta agcaaattaa gcaaagaaat taaagtgaag aaaggagtaa attattgtcg 121 cagcaactgg aatttacaaa cactaaattc ccgaagaaaa gacgttacta caacctctta 181 taggttttca atccaggtgt gtccataacc aatcgaagtg ccatctcgca tagcgaggag 241 tttcttgttg ctttaaggaa caacaacaac aaaattattt aaatttccgt ggtcgacgtg 301 aaatgttgcc atttacacca caagtcgtta aacgtttatt ggcattaaaa aagtgtaacg 361 aagatagcgt tgaaggcaag tggtctgaaa aggctgtcaa aaatttagtg aaaaaaatca 421 aaaagaactc atcattggag gaactagaac gtgcaatttc tacacagaat ccaaatacaa 481 ggtgtgtcac tctaccgcgc agcaaaccca ctgcttcggg tgaaaaccta cgcaagggtt 541 tgccgcacgt aatctattgt cgtttatggc gttggccgga cttgcaatca caaaatgaat 601 tgaaagcttt ggatcattgc gaatatgcat ttcatttgcg caaggatgaa atttgtataa 661 acccatacca ttacaagaaa ttggaactgt cgatattggt gccgaagtca ctacccacac 721 ctccagacag tatagttgac tatccgctag ataatcacac ccatcaaata ccaaataata 781 cagaatacaa tgctgcaact atacgtagtg cgtcgttaag tcctccgcaa tacatggata 841 taggaaggtc acagcagcag cagcaccaat atcaccaaca acagcagcgt tcgcctgcca 901 gcttctttac gggaaatatg agtggggcat cgactcagca gcagcagcaa cagcaaatta 961 ccactaataa cctaccgcca ggtgcgtgta acatggattc ccagtccagt gtattgagtg 1021 tgggtagcaa tagcatgcca aacacgggta cacctccgcc aggatatatg agtgaagacg 1081 gtgatccggt agatccgaat gataatatga atatgacacg tttgacgccg ccagcggaat 1141 cagcaccagt tatgtatcat gaaccagcat tttggtgttc catatcatac tatgaattga 1201 atacacgcgt gggagaaaca tttcatgcct ctcagccctc cattacagta gatggcttta 1261 cagatccttc gaattcggag aggttctgtt tgggactgct ctccaatgtg aaccgcaatg 1321 aggtggtgga gcaaacacgt cgacatatcg gtaaaggggt acgcctttat tacatcggcg 1381 gagaagtgtt tgctgaatgc ctaagcgatt catctatttt cgtacaatcg ccaaattgca 1441 atcaacgcta tggctggcat ccggcaactg tttgcaagat tccacctggc tgcaatctga 1501 aaatatttaa caaccaggag tttgcggcgt tgctctccca atcggtttcg caaggtttcg 1561 aagcggtgta tcaattgaca cgaatgtgca ccatacgcat gtcctttgtc aaaggatggg 1621 gagctgagta tcgacgtcaa accgtcacat ccactccctg ttggatcgag ttgcatttga 1681 atggtccttt gcaatggtta gatcgcgttc taacgcaaat gggctctccg cgcatgccat 1741 gtagttccat gtcttaaaca acagaacaac ttatacgcag cataaccaga tttttagatt 1801 acgagtatat agaatagaga gaagaagagg atatgtttct ctgtgtgttt tttttttatt 1861 ttatttcttt catctaatta tactataatt aagattgcat gagcaagtag ttgtacgcat 1921 taagtaaaat tgaaaaaaaa ttgtatttta cctagattta ttgtcattgt gacactaata 1981 attcattgtg tttttatttt gtgtgttttt ttatacatat acatatttca tttatgtttg 2041 catttgttcc ttattttctt ttgattaaca agaaaaaatt gattttgaaa atttgttaaa 2101 actttaaaaa acggtttatt tgtttgttgg cttgtgtgaa gtgtttgtag tttgccaatt 2161 acttagagta atgaaatcgt cgatgaatac gatacttgat catataatgt tttgaatgtt 2221 tttttctaaa taacttttga attgaccatt agcacagagt cagagttgcc acaatatggt 2281 ttatattgtt gaccgcttaa ctgattttat ttctttgtat tttatataaa aaagtttaca 2341 gtcagtagac atatttagca tcggctaaga gattttcact ctttatatat attttttata 2401 cttgtatgtt agtctcaaca tacatatatc ctgtgctttt ttttaataag tttgtcactt 2461 tttagttaat tgttcagttt tgttctatta tatgttctgt ttttattcgt ttattgatat 2521 tttctgatta tcttgctcat tatactcttg ttagacctct atgtaatggt cctcgaccat 2581 ataacgtatg catacatttg ttatcctttt ggcattttta tcttaatcaa gccatgttcg 2641 tctgtctgta aaagtagggt tatacttcaa tgaaaggctg aacaagatta ttcatagaat 2701 tgattgattt cagaatgctg aactaaagtc ctatacaaaa tctcatttaa ttcacgtacg 2761 cttgatatgt acgctatgtc cctattagat tttccaccac tgtagctccc atataaaccg 2821 atcgtaggat tgccttccca ttgtgcttaa atttgatatg taaaatactc taatgaactt 2881 aaccatacac aagaaatatg ggtcatctac atccgtgggt atataatcca tgataaattg 2941 cccacgaact tttcattaag gaacaggatg ccaacttctc acatatcaat gagtgctgtc 3001 cgattcaagt ttaagctcag agataaagga cctcctttta atagctgaat cgaaacgaca 3061 aaactttggg tagaagtttt tacatggctg ctgtgccatt tacctggcat agtatcttac 3121 aaatgtggcc agcattaaga ggcataacca gtactgcaat cccatggcag ccggttgtac 3181 gtgtataaca cactgctata acaacaacaa ccagtgctga atatttttct gatgttctcg 3241 ccaggatcca aaaccaggcg ttcatagtca taggtagacg tttaagccct ggccaccttg 3301 cgaggcgtac cccattttaa tcgattctcc ttttttgagc ccttaaaagc cacaattttt 3361 gtccaatttg acagcacttt tgttcgattg acatttgcac accttcataa cgggcgcgaa 3421 atttttgact tctgttctag caaactgcgg caaagcgtta gaactttttt gatggcctga 3481 gaaatggaaa gttgaacgcg ttgatattct gatggagtat aaacgttctc ccatataggt 3541 gacataagag caaagtacct aacggaaatc ctcaaccggt acccgagaca tgggaaattg 3601 gttgaatgag aaatgaagcc acgaaattct gcagaccaag taaatttttt ataggcgttt 3661 tttctcctat ccccggacgc aaaaacattt gaggcacttc taccactcag attgaatcca 3721 tctctattcg cagcatattt tgaacatggt gtgcgcaaaa tgctcagcca gactttataa 3781 cttaccacca tcaccacaca tatcacccac agtctgaatg agaaaagacc ccgtggcgca 3841 ctgttttcgt agctctgaac cattcgatag gtcaatacgg cacgggataa ctatgaacac 3901 cacacagacg gaactttgag ctccgatatg tgtggtggtc atatatagtt atcacgataa 3961 gctcagctgg gagctaccgg gcgcgtccac aggttgcgga tagtgggatg cttcgtagct 4021 ataacttcag tagtggacaa acagtggtat tgggtgtaga gtctcagtga gagcccgggt 4081 gacaccggct tttgatatga