PREDICTED: Stomoxys calcitrans phenylalanine--tRNA ligase alpha

LOCUS       XM_013252484            1694 bp    mRNA    linear   INV 02-SEP-2023
            subunit (LOC106087442), mRNA.
ACCESSION   XM_013252484
VERSION     XM_013252484.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013252484.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1694
                     /gene="LOC106087442"
                     /note="phenylalanine--tRNA ligase alpha subunit; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:106087442"
     CDS             95..1585
                     /gene="LOC106087442"
                     /codon_start=1
                     /product="phenylalanine--tRNA ligase alpha subunit"
                     /protein_id="XP_013107938.1"
                     /db_xref="GeneID:106087442"
                     /translation="MHPDLTERILQHLENVDKVDTLDLVDVFGVDHQKIVGALKSIQA
                     HGELVTAETTSRKSLELTEEGQLVVTNGSHEAVLYNSVPVEGIAQAELMKSGPNAKVG
                     FSKAMSQGWILVDKSVNPPLVKRKVDKIEDSVRQNLVAIASGKTDIPANLVSEYKKRK
                     LLQEITTKSFVLTKGSEFSTTLTKLETDLTVDMLASGLWKDLKFKSYNFDALGAPPTR
                     GHLHPLLKVRTEFRQIFLEMGFSEMPTNNYVESSFWNFDALFQPQQHPARDAHDTFFI
                     NHPAKSYKFPQDYLQRVKKVHSSGGYGSQGYGYDWKLEEAQKNLLRTHTTAVSARMLY
                     KLANQAEGFKPAKYFSIDKVFRNETLDATHLAEFHQVEGVIADVGLTLGDLIGTLYEF
                     FRKLGITQLEFKPAYNPYTEPSMEIFCFHPGLGKWIEVGNSGVFRPEMLLPMGLPENV
                     NVIAWGLSLERPTMIKYGINNIRDLVGPKVDLKMVEEGPICRLERA"
     misc_feature    104..1573
                     /gene="LOC106087442"
                     /note="Probable phenylalanyl-tRNA synthetase alpha chain;
                     Region: PLN02853"
                     /db_xref="CDD:215458"
     polyA_site      1694
                     /gene="LOC106087442"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 catgtcgtca actgcaattc cacgattact gttggtaatt gaacacgcca acaaatttag
       61 aaaatttgat ttctattgat aatctatatt taaaatgcat cccgatctca cggaaaggat
      121 acttcagcat ttggaaaatg tcgataaagt cgacacgcta gatttggtgg acgtttttgg
      181 tgtggatcac cagaaaattg ttggagctct caaatctata caggcgcatg gcgaacttgt
      241 gactgcagaa acaacatctc gtaaatcttt ggagttaact gaagagggtc aattagttgt
      301 gaccaatggc agtcatgagg cagttttata caactcggtt cccgtcgaag gcatcgctca
      361 ggcagaatta atgaagagtg gtccaaatgc aaaagtaggt tttagtaagg ccatgtctca
      421 aggttggata ttggtagaca aatcagtgaa tcctcccttg gtaaagcgta aagttgacaa
      481 gattgaagac agcgtaaggc aaaatcttgt ggctatagcc agcggcaaaa ctgacatacc
      541 ggctaatttg gtttcggaat ataagaagcg aaaattgctc caagaaataa cgacaaaaag
      601 ttttgtcttg accaagggat ctgaattttc cacaacgcta acaaaattgg agactgattt
      661 gacggtggac atgttggcct caggtttatg gaaggacttg aaatttaaat catacaattt
      721 cgatgcattg ggcgcaccac caacacgcgg tcatttgcac cctctactaa aagtacgcac
      781 agagttcagg caaatatttt tggaaatggg cttttctgaa atgcctacga acaattatgt
      841 ggaatcatct ttctggaatt ttgatgccct tttccagcca caacaacatc cagctcgtga
      901 tgctcacgat acattcttta ttaaccatcc ggcaaagagc tataaattcc cacaagacta
      961 tctacagcgg gtgaaaaagg tgcattccag cggtggttat ggttcacaag gttatggcta
     1021 cgattggaaa ctggaggagg cccaaaagaa tcttttacgc acgcatacaa cagcggtcag
     1081 tgctcgcatg ctttacaaac tggcgaatca agcagaaggc tttaaaccag ccaaatattt
     1141 tagcatagac aaggttttcc gcaatgaaac cctagatgcg acacatttgg ctgaattcca
     1201 ccaagtggaa ggtgtaattg ccgatgtggg cctaacattg ggcgatctta ttggaaccct
     1261 ctacgaattt ttccgtaagt taggaataac tcaattggaa tttaagccgg cttacaatcc
     1321 ctacacagaa ccgagcatgg aaatattttg tttccatccg ggccttggaa agtggattga
     1381 agttggcaat tccggagttt tccgaccaga gatgttgctt ccaatgggct tgcccgaaaa
     1441 tgtcaatgtt atagcctggg gcttatcgct agaaagacca acaatgatca aatatggcat
     1501 taacaatata agagatctag tcggaccaaa agtagattta aagatggtgg aagaaggccc
     1561 aatatgccgt ttagaacgag cttaatcctt aaagaaaatt acaagagttt aactattatg
     1621 ctatcacgtc tttttctcac ttcttattta tgtgattaat atattttttt taaataaatt
     1681 tacaaaaagt aaaa