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LOCUS XM_013252072 4012 bp mRNA linear INV 02-SEP-2023 (LOC106087145), mRNA. ACCESSION XM_013252072 VERSION XM_013252072.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013252072.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4012 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4012 /gene="LOC106087145" /note="regulator of nonsense transcripts 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106087145" CDS 57..3602 /gene="LOC106087145" /codon_start=1 /product="regulator of nonsense transcripts 2" /protein_id="XP_013107526.2" /db_xref="GeneID:106087145" /translation="MVEEKDLEGSEADTKEMEAAPDPAEVERQEKEELNAFLTELKSK ITAKSHLRYENTNFDLPEESYFAKLDSSLKRNTAFVKKLKQFTAAQLDSLMKDMKGLN LSKYISEICSALSEAKIKMTDVPAVVMLCSKLHQTYADFDNEFFEAWQKTLQLKPGEK IANASKLRVDLRLFAELVSSGVINSKQGLGLLGNVLTNVISQDKEDHSNFSIILSFCR HCGEEYAGLVPTKMINLAAKYGGQIPKSDFLAPDKQQNLKNLLKDYFKYLCKYLLAEQ AELMNMTNNLKKAMASKGEISTKTKEKCELMQANFDKLLSSAQTLSDLLDEPLPELAK EIEICNPGAVIENMMDEAALGELDPWGDEETKSFYVDLPDLRQFLPNFSAPKIDPEQI EDTSVMTEEALDAEIDNDLDLDDPPSTASDPANDKDDKDIDEVTGAGALPDKIGNALM EAGRMSNQSAGSIKQQFAQFLKNLNNCVNKELIDSAAIEFLLNYNTKNNRKKLTKSIF AVHRNRLDLLPFLSRFVAIVNLCNTDVALDLSENLRKEFKWHIRMKNQLNIESKIKIV RFMGEMVKFGLLKKFDALSCLKILLRDFQHHQIEMACAFIEVAGVYLYNCKDTRWLMN TFLDQMLRLKTATALDSRHAAQVENVYYLVKPPETIKQDVVLRPPIHEYIRHLVFEEL NKQNVERSIKMLRRINWNDPTVSSYVIKCLSKAYLLRFPLIRCLADLLSGLSSYQERA VTMVIDNVFEDIRAGLEIHSPKLAQRRIAMAKYLGELYNYKLVESNNILNTLYSIISL GVSTEEGVVSPLDPPDSLFRLKLACVLLDTCGPYFTSSTSKQKLDYFLVFFQNYYWYK KSNPIFSRVQDTHDLFPIIVDHMYRECLANVRPKLKLYKSLEQAKEAIEKLKEKLYPQ LKEITAQSCEESSNLQSIPEDSEFDDGASDDSSSEMDRRPRDEVADDEDAANQANTTD WTENEGMPEDECIMVPKIPEKTKEDLEFEQMFEKMAQDSYQERLKETVKPNTKDIPVP MMVRNNKKSYEQIASMPTTATSQQSTTTAGDTSKPNSSAAGGAGAATGAGPINFVLMV RGGKGGKQQFKQFVAPSDSQLAINLKLQEEKIREEKEKVKRLTLNITERIEEEDYQES LMQSQRSSQTNLYARPSKPKFKHQKGAPDVDLIFH" polyA_site 4012 /gene="LOC106087145" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcttgcatat ttcacaccgt agattatccc acttttagga gttctttagc gtagcaatgg 61 tggaggaaaa agacttggaa ggtagtgaag cggataccaa ggagatggag gccgctcccg 121 atcccgcgga agtagaacgt caagaaaaag aagaactaaa tgccttcctc acagaattga 181 aatccaaaat tacagcaaaa tcccatttgc gttatgagaa cacaaatttc gatttgccag 241 aagagtccta ttttgccaaa ctggattcca gcctaaaacg caacacggcg tttgtcaaga 301 aacttaagca atttacagca gctcagttgg attccctaat gaaggatatg aagggcctga 361 atttaagcaa atacatatcg gaaatatgtt cagcattgtc cgaagccaag ataaaaatga 421 ctgatgtacc cgctgtggtg atgttgtgct ccaaactgca tcaaacctat gcagatttcg 481 ataatgaatt ctttgaggct tggcagaaaa ctttgcaact aaaaccagga gagaaaatag 541 ccaatgccag caagctgcga gtggatttac gtttgtttgc cgaactcgtt agctcgggcg 601 ttattaatag caaacagggt ttgggactgc tgggaaatgt tctcaccaat gtcatatcgc 661 aagataagga agatcacagc aatttctcaa taattttgtc attttgtcgt cactgcggtg 721 aggagtatgc cggcctggtg cctacaaaaa tgatcaattt ggctgcaaaa tatggaggcc 781 aaatacccaa atcggatttt ctagcgcccg ataagcaaca gaatctgaaa aatctgctga 841 aggattactt taaatatttg tgcaaatatt tgctcgctga acaggcagaa ttgatgaaca 901 tgacaaataa tttgaagaag gccatggcat ccaaaggtga aatctctacc aaaaccaagg 961 agaagtgtga gctcatgcag gctaatttcg acaagctttt atcttcggct caaacacttt 1021 cggatttgct agatgagcct ttgcctgagt tggccaaaga aattgaaatt tgcaatcctg 1081 gggctgtcat tgagaacatg atggatgagg cagctctggg agagcttgat ccttgggggg 1141 acgaggaaac caaaagtttc tatgtagatt tgcctgactt gcgacagttt ctgccgaatt 1201 tctctgcgcc caaaattgat ccagagcaaa ttgaggatac ttcggtaatg actgaagagg 1261 ctttagatgc cgaaattgat aatgacttag atttagatga tcctccctca acggcctcag 1321 atcctgccaa tgacaaagac gataaggata tcgatgaggt gactggagca ggcgcattgc 1381 ctgataaaat cggcaatgcc cttatggaag ctggacgcat gagcaatcaa tcggcaggtt 1441 caattaaaca acagtttgct caatttttga aaaatcttaa taactgtgtc aacaaggagc 1501 tcatcgactc ggcggccata gaattcctac ttaactataa taccaagaat aaccgcaaga 1561 aactgactaa atccatattt gcggtgcata gaaatcgttt ggatttatta cccttcctct 1621 cgcgttttgt ggccattgtc aatctttgca atacggatgt tgcccttgac ctgtctgaaa 1681 atttgcgcaa agaatttaaa tggcatattc gcatgaaaaa ccaattgaat attgaatcga 1741 agataaaaat tgtgcgtttt atgggtgaaa tggttaaatt tggcctactc aagaaattcg 1801 atgcccttag ttgtttgaaa atattgttgc gcgactttca gcatcatcaa atagaaatgg 1861 cctgtgcgtt catagaagta gctggagtct atctctacaa ctgcaaggat acccgttggt 1921 tgatgaatac cttcctcgac caaatgttgc gtctgaaaac tgccaccgct ttagactcca 1981 gacatgctgc ccaagtagag aatgtctact atttggttaa accaccggaa acaataaagc 2041 aagatgttgt tttaagacca cccatacatg agtacatacg gcatttggta ttcgaagagt 2101 tgaataaaca aaatgtggaa cgttccatta aaatgctgag gcgcatcaat tggaatgatc 2161 ccacagtcag cagttatgtc atcaaatgtt tgtcaaaggc ttatctcttg cgcttcccat 2221 taattcgctg cttggcagac ttgctctctg gtcttagctc atatcaggaa agagctgtaa 2281 ccatggtcat tgataatgtt tttgaagaca taagggctgg tctggaaatt cattcgccta 2341 aattagccca acgacgcatt gccatggcca agtacttggg tgaactttac aactacaagt 2401 tggtggaatc caataacatt ttaaatacct tgtactccat tatctccttg ggggtgtcta 2461 cggaagaggg tgtggtttcg cctttggatc cacctgatag tttgtttcgt ttgaaattgg 2521 cctgtgtttt gctggatacc tgtggcccct acttcaccag ttcaaccagc aaacaaaaat 2581 tggattactt tctggttttc ttccaaaact attactggta caaaaaatcc aatcccattt 2641 ttagcagggt acaagacacc catgacttgt ttcccataat tgttgatcac atgtaccgcg 2701 aatgtttggc caatgtaagg ccaaagctaa agctatacaa gagtctggaa caagctaaag 2761 aagccataga gaaactcaag gagaagttgt atcctcagct taaggaaatt accgcacaga 2821 gttgcgagga gagcagtaat ttgcaatcaa tacccgaaga tagtgaattt gatgatggag 2881 ccagtgatga ttcgtcctct gaaatggatc gtagaccccg cgatgaagtc gcggatgatg 2941 aggatgccgc caatcaagcc aacaccactg actggactga aaacgaaggc atgccagaag 3001 atgaatgcat tatggttccc aaaattcccg aaaagactaa agaagatttg gaatttgaac 3061 aaatgtttga aaaaatggcc caagattcat atcaagaacg tttaaaggaa actgttaaac 3121 ccaacaccaa ggatatacca gtacccatga tggtaagaaa taacaaaaaa tcctatgaac 3181 aaattgcttc catgccaact acggctacct cgcaacaatc aacgacaact gctggtgaca 3241 cctccaaacc taattcctct gcagctgggg gtgctggtgc tgctactgga gctggaccca 3301 ttaactttgt actcatggta cgcggtggca aaggcggcaa acaacaattt aaacaatttg 3361 ttgctccctc cgattctcaa ttggccatta acttgaaatt gcaagaggaa aaaatacgcg 3421 aagaaaagga aaaagttaaa cgtcttacgc ttaatattac cgaacgcatt gaggaggagg 3481 attaccagga atccctaatg caatcgcagc gcagcagcca gaccaatctg tatgcacgtc 3541 ctagtaaacc taaatttaag catcaaaaag gcgcccctga tgttgattta attttccatt 3601 gacacactga taaaatactc taaatctcta tgggggattt gtgttacttc cgacaaacca 3661 gtaaggggga tgaaactctc gtcagatatt attatccctc cgcctggact ttcaaggcag 3721 agtcagttag cagttgagtc aggtgttagc gcttgcatca aattgcgttt attcccaata 3781 ctcaagcctt gaatgattga atgacttaca tatatacata tggcatgctg cagttaattt 3841 acaccaccac actaccacta tcatcattat aaaatgatat aaaaatgtaa ttatagcata 3901 tatctctctc gtccttctta ttttttgtag aatgtagatt gagattcgat tatttgttac 3961 agctgtcgtt ttaataattt tcagtgaaat aaaaactatg tataaaattc aa