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LOCUS XM_013252022 2700 bp mRNA linear INV 02-SEP-2023 methyltransferase FTSJ3 (LOC106087104), mRNA. ACCESSION XM_013252022 VERSION XM_013252022.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013252022.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2700 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2700 /gene="LOC106087104" /note="pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106087104" CDS 151..2598 /gene="LOC106087104" /codon_start=1 /product="pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3" /protein_id="XP_013107476.1" /db_xref="GeneID:106087104" /translation="MGKKTKVGKARKDKFYQLAKETGFRSRAAFKLIQLNRKFGFLQQ SQVCIDLCAAPGGWMQVAKQNMPVSSIVIGVDLFPIRTIPGCISLVEDITTDKCRASL TKELQTWKADVVLHDGAPNVGRNWLHDAYQQICLTLMSLKLATEFLRGGGWFVTKVFR SKDYNALLWVLKQMFKKVHATKPSASRKESAEIFVVCQGYLAPDRIDPRLLDPKYVFE ELDLEGAKKGSLLHPEKQKRIKAEGYTEQDIALRNDLAASEFMQSENGLAALQGIGSI TIDDKRIAKHPKTTAEILECCKDIKVLGRKDIKGLLAWWKAIKEELYKEEDKEAAVID EEEAPAKPLTQEEIEDMEDEELQKQISELAEEEDRDLKRKRKKTLKAKAKLQEKMNLK MVIKGDDGPKEEADQEIFDLKDVRTKEELDEMLDVTPDFDIEAEAVDVPKLPKYKKYD KDDKRLDDDANYENDDEPEVSSDEDSESDLEQEGLGLSDDEDLEEASKRTNKNKKKKT EHPLIKSSDFRDKDTRRQQRVQLWYEKENLQNINDEDDEDFDLDRLAKEYKSKGVSVL GESQETGDSNILMGKKAKRRARHAEPKEESSSESSSDSEEEVDDDDDEKVAGDMSKEP KAKKIRLTEEELALGAMMIKGKKTRRDLIDGAWNRYAFNDDNLPSWFVQDEQVHMQKP TPVPKELAEEYQRKVQELNVRPIKKVMEAKARKRRRAVKRLAKAKKQAEKIMESADAT NQEKAKQLKKIYKKAQEKKKEVTYVVAKKHQTGRRARRPAGVKGRYKVVDPREKKDKR SLKAKDKKNKRKGKGKK" misc_feature 220..750 /gene="LOC106087104" /note="FtsJ-like methyltransferase; Region: FtsJ; pfam01728" /db_xref="CDD:426399" misc_feature 847..1260 /gene="LOC106087104" /note="Domain of unknown function (DUF3381); Region: DUF3381; pfam11861" /db_xref="CDD:463375" misc_feature 2005..2550 /gene="LOC106087104" /note="Spb1 C-terminal domain; Region: Spb1_C; pfam07780" /db_xref="CDD:462264" polyA_site 2700 /gene="LOC106087104" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgtgaacaa caacaactaa agcagccaaa cacgtgcact ctcgtttgta cgctgcattt 61 gaaaggaatt tttcatattt tttcttgttt aattcaacta aggaaactaa tttcacaatt 121 ataaggcgta aaaatatcta ctaaataaca atgggtaaaa agaccaaagt tggaaaagcc 181 cgtaaagata agttctatca attggccaag gaaacaggtt ttcgctctcg tgccgccttc 241 aagttgatac aacttaatcg caaatttgga tttcttcagc aatcgcaagt atgtatagat 301 ttatgtgctg ctcctggtgg ttggatgcag gtggctaagc aaaatatgcc tgtatcgagc 361 attgttatag gcgtagatct ttttcccata agaaccattc cgggttgtat tagtttagtg 421 gaagatatta ccaccgacaa atgtcgcgcc tcgttaacca aagaactgca aacctggaag 481 gctgacgttg tgctgcatga tggtgcgcca aatgtgggtc gtaattggtt gcatgatgcc 541 tatcaacaaa tatgcctgac attgatgtct ctaaagttgg ccaccgaatt cttaagggga 601 ggtggttggt ttgttaccaa agttttcaga tctaaagatt ataatgctct gttgtgggtc 661 ttgaagcaaa tgtttaagaa agtgcacgcc accaagccca gtgcttcgcg taaggagtca 721 gctgaaattt ttgtggtctg ccaaggttat ttggctcccg atcgtataga tccacgtctt 781 ttggatccta aatacgtttt tgaagagctg gatttggagg gagccaaaaa aggcagtctc 841 ttgcatccag agaaacaaaa acgcattaaa gccgagggtt acacggagca agacatagcc 901 ctgagaaatg atttagctgc ttcagagttc atgcaaagtg aaaacggttt ggcagcttta 961 cagggcattg gttccataac cattgatgat aagagaatag caaaacatcc caaaactact 1021 gcagaaattc tagagtgctg taaagatatt aaagttttgg gtcgcaaaga tatcaagggt 1081 ctgttggcct ggtggaaggc catcaaagaa gaactttaca aagaggaaga taaggaagct 1141 gccgtcattg atgaagagga agctcctgcc aaacctttaa cacaggagga aatagaggac 1201 atggaagatg aagaattgca gaagcaaata agtgaattgg cagaagagga agatcgggat 1261 ctaaagcgca aacgcaagaa gaccttaaag gctaaggcca aattgcaaga gaaaatgaac 1321 ttgaaaatgg ttatcaaagg agatgatgga cccaaagaag aggccgatca agaaattttc 1381 gatctaaagg atgtcagaac aaaagaggaa cttgatgaaa tgctggatgt tacaccagac 1441 tttgatattg aggcagaagc agtggatgtg ccaaagttac caaaatataa aaaatatgat 1501 aaagatgaca aacgcttaga tgatgatgcc aactatgaaa acgatgacga acccgaagtt 1561 tccagcgatg aggacagtga aagtgatttg gagcaagagg gactaggact tagcgatgat 1621 gaagatcttg aggaagccag caagaggaca aataaaaaca aaaagaaaaa aactgaacat 1681 cctctaatca agtccagtga tttccgtgat aaagatacac gtagacagca aagggttcaa 1741 ttatggtatg aaaaggaaaa tttgcaaaat atcaacgacg aagatgatga ggatttcgat 1801 ttggatcgtt tggccaagga atacaagagc aaaggtgtat ctgtattggg agaatctcaa 1861 gaaaccggag attcaaatat tctaatgggc aaaaaagcaa agcgtagggc tcgacatgcc 1921 gaacctaaag aagaatcatc ctcggaatcc tctagtgatt cggaggagga agttgatgat 1981 gatgatgatg aaaaggtggc tggtgatatg tccaaggaac ccaaagccaa gaaaatacgc 2041 ctcactgaag aagaactggc cttgggtgcc atgatgatca aaggcaaaaa gactaggcgt 2101 gatttaatcg atggcgcttg gaatcgttac gccttcaatg atgataactt gccttcgtgg 2161 tttgttcagg atgaacaggt acacatgcag aaacccacgc cagtgcccaa ggaattagcc 2221 gaggaatatc agcgcaaggt tcaagagctt aatgtgcggc caattaaaaa ggtgatggaa 2281 gccaaggcac gtaaacgcag acgtgctgtg aaacgtttag ccaaggcaaa gaaacaagcc 2341 gaaaagatta tggagagtgc cgatgccaca aaccaagaaa aggccaaaca gcttaagaag 2401 atttacaaaa aggcccaaga gaaaaagaag gaagtaacct atgtggtggc caagaaacat 2461 caaacgggac gtagagccag acgtccagca ggcgttaagg gtcgctataa ggtggtggat 2521 ccccgcgaaa agaaggataa gcgttctttg aaagccaagg acaaaaagaa taagcgcaaa 2581 ggcaagggca aaaagtagat gaattagttt taaatttgtt tcattaactt taaatatagg 2641 ttatagaatg gctagcataa atgaaaatat gtacaatata tatgtataat tttatataaa