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LOCUS XM_013252019 1785 bp mRNA linear INV 02-SEP-2023 (LOC106087101), transcript variant X2, mRNA. ACCESSION XM_013252019 VERSION XM_013252019.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013252019.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1785 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1785 /gene="LOC106087101" /note="E3 ubiquitin-protein ligase RMND5A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106087101" CDS 232..1545 /gene="LOC106087101" /codon_start=1 /product="E3 ubiquitin-protein ligase RMND5A isoform X2" /protein_id="XP_013107473.1" /db_xref="GeneID:106087101" /translation="MSTISPAAELEAITAVDKELDRVINKFTEIRENAAAEINDVASL LEELLQVLARAEQEMTGTINTGTQVDTDDHMTDEAEMLVEMEPSTPRLTESQISIITE ALQKTNEKLQRLSSEHRELHGAVSKVGKVIDRNFISDFTATTRTDALQDEDNIMLLNK VMAKHYCRQGMDDVAQLLIKESKMPEEMAREVFESERSFAEIFRIWKAIQQHDLSLAL EWTSRYSNELIAKNSTLEFKLHRLAFLQIISKGISAQSEAIAYARNNFHKFIDRFEQE IPNLMGCFIYLPSGIENSPYKHLISPEMWTEASYIFLKDACHTLGISKNSALSVVINA GCTALPALLNIKQVMQSRQVLNIWSGRDELPIEIDLDPEYRYHSIFACPILRQQTTEE NPPKKLTCGHVISNDALHKLSNGHILKCPYCPVEQNAEEAVRIYF" misc_feature 508..1542 /gene="LOC106087101" /note="Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]; Region: COG5109" /db_xref="CDD:227440" polyA_site 1785 /gene="LOC106087101" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 actggtgcat aaaaacaaaa tctcttctct tccattgtta aaagaaaaaa aaaggagttt 61 gcatatatat tgcgttataa gattaataat ttttgttcaa aaattcattt taataaaaaa 121 aaattactag agacggagat tgtaactgga ttataatttt caaaagatat atacatacat 181 atagggaaaa ttttggtctt atttctgagt agggattgcg agccagttac catgagcacc 241 atatctcctg cagcggaatt ggaggccatt acagctgtcg acaaggagct ggatcgtgta 301 atcaataagt ttactgagat acgtgaaaat gcagcggcgg aaatcaatga tgttgcctca 361 ctgctggaag agcttttgca ggttttggcc agagctgagc aggaaatgac gggaactatt 421 aacaccggca cacaggtgga taccgatgat catatgaccg atgaagcaga aatgctggtg 481 gagatggagc cttcaacacc ccgcttgacc gagagtcaaa tatccattat aacagaggct 541 ttgcaaaaaa ccaatgagaa attacaacgt ttgtccagcg aacatcgtga attgcatggt 601 gccgtctcta aagtgggcaa agttatagat cgcaatttta tttcggattt cactgccacc 661 accagaactg atgccttgca ggatgaagat aatataatgc ttttgaacaa ggttatggcc 721 aaacattatt gcaggcaggg catggatgat gtggcacaat tgttgattaa agaatccaaa 781 atgccggagg aaatggctcg cgaagttttt gaatcagagc gtagttttgc tgagattttt 841 cgcatctgga aggctataca acagcatgat ttaagcttgg ccctggagtg gacatcaaga 901 tattctaatg aactcatagc caagaattca acattggaat ttaagctaca tcgtttggcc 961 ttcttacaga taatatcgaa gggtatatcg gctcaaagtg aagctatagc atatgcacgc 1021 aataattttc ataagtttat tgatcgcttt gagcaggaaa taccaaattt aatgggttgc 1081 tttatatatt taccttcggg tatagaaaac tcaccctaca agcatttgat ttcgccagaa 1141 atgtggactg aggcttcgta tatatttttg aaagatgcat gtcatacctt gggcataagt 1201 aagaattcag ctttgtcggt ggtcataaat gctggatgta cagctctacc agctttgctc 1261 aatataaaac aagttatgca atcccgtcaa gttcttaata tttggagcgg tcgtgatgaa 1321 ttgcccattg aaattgattt ggatcctgag tatcgttatc actccatatt cgcttgtccc 1381 atcctaagac aacaaaccac agaggaaaat ccacccaaaa agttaacctg tggacatgtc 1441 atatccaatg atgctctaca taaactcagc aatggtcaca tactcaaatg cccctattgt 1501 ccggtagaac agaatgcgga agaggctgtc aggatttatt tttaaatttt ggttaccata 1561 ttcgatttgg cgtatatact aataacgtaa tatgtagact tagcctttat tttattatgt 1621 attattgtaa cttgtaactg tcacattgtt tctgctggaa aagatggaga gcttttacgt 1681 gtgtggatgg ttgaatggaa ggatgaatag ataaaaatga ttgtgtaacg tgttaattac 1741 tgtaggagaa ataaaaatgc caattctttt tcttcttcga agaaa