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LOCUS XM_013252018 1788 bp mRNA linear INV 02-SEP-2023 (LOC106087101), transcript variant X1, mRNA. ACCESSION XM_013252018 VERSION XM_013252018.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013252018.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1788 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1788 /gene="LOC106087101" /note="E3 ubiquitin-protein ligase RMND5A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106087101" CDS 232..1548 /gene="LOC106087101" /codon_start=1 /product="E3 ubiquitin-protein ligase RMND5A isoform X1" /protein_id="XP_013107472.1" /db_xref="GeneID:106087101" /translation="MSTISPAAELEAITAVDKELDRVINKFTEIRENAAAEINDVASL LEELLQVLARAEQEMTGTINTGTQVDTDDHMTDEAEMLVEMEPASTPRLTESQISIIT EALQKTNEKLQRLSSEHRELHGAVSKVGKVIDRNFISDFTATTRTDALQDEDNIMLLN KVMAKHYCRQGMDDVAQLLIKESKMPEEMAREVFESERSFAEIFRIWKAIQQHDLSLA LEWTSRYSNELIAKNSTLEFKLHRLAFLQIISKGISAQSEAIAYARNNFHKFIDRFEQ EIPNLMGCFIYLPSGIENSPYKHLISPEMWTEASYIFLKDACHTLGISKNSALSVVIN AGCTALPALLNIKQVMQSRQVLNIWSGRDELPIEIDLDPEYRYHSIFACPILRQQTTE ENPPKKLTCGHVISNDALHKLSNGHILKCPYCPVEQNAEEAVRIYF" misc_feature 511..1545 /gene="LOC106087101" /note="Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]; Region: COG5109" /db_xref="CDD:227440" polyA_site 1788 /gene="LOC106087101" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 actggtgcat aaaaacaaaa tctcttctct tccattgtta aaagaaaaaa aaaggagttt 61 gcatatatat tgcgttataa gattaataat ttttgttcaa aaattcattt taataaaaaa 121 aaattactag agacggagat tgtaactgga ttataatttt caaaagatat atacatacat 181 atagggaaaa ttttggtctt atttctgagt agggattgcg agccagttac catgagcacc 241 atatctcctg cagcggaatt ggaggccatt acagctgtcg acaaggagct ggatcgtgta 301 atcaataagt ttactgagat acgtgaaaat gcagcggcgg aaatcaatga tgttgcctca 361 ctgctggaag agcttttgca ggttttggcc agagctgagc aggaaatgac gggaactatt 421 aacaccggca cacaggtgga taccgatgat catatgaccg atgaagcaga aatgctggtg 481 gagatggagc cagcttcaac accccgcttg accgagagtc aaatatccat tataacagag 541 gctttgcaaa aaaccaatga gaaattacaa cgtttgtcca gcgaacatcg tgaattgcat 601 ggtgccgtct ctaaagtggg caaagttata gatcgcaatt ttatttcgga tttcactgcc 661 accaccagaa ctgatgcctt gcaggatgaa gataatataa tgcttttgaa caaggttatg 721 gccaaacatt attgcaggca gggcatggat gatgtggcac aattgttgat taaagaatcc 781 aaaatgccgg aggaaatggc tcgcgaagtt tttgaatcag agcgtagttt tgctgagatt 841 tttcgcatct ggaaggctat acaacagcat gatttaagct tggccctgga gtggacatca 901 agatattcta atgaactcat agccaagaat tcaacattgg aatttaagct acatcgtttg 961 gccttcttac agataatatc gaagggtata tcggctcaaa gtgaagctat agcatatgca 1021 cgcaataatt ttcataagtt tattgatcgc tttgagcagg aaataccaaa tttaatgggt 1081 tgctttatat atttaccttc gggtatagaa aactcaccct acaagcattt gatttcgcca 1141 gaaatgtgga ctgaggcttc gtatatattt ttgaaagatg catgtcatac cttgggcata 1201 agtaagaatt cagctttgtc ggtggtcata aatgctggat gtacagctct accagctttg 1261 ctcaatataa aacaagttat gcaatcccgt caagttctta atatttggag cggtcgtgat 1321 gaattgccca ttgaaattga tttggatcct gagtatcgtt atcactccat attcgcttgt 1381 cccatcctaa gacaacaaac cacagaggaa aatccaccca aaaagttaac ctgtggacat 1441 gtcatatcca atgatgctct acataaactc agcaatggtc acatactcaa atgcccctat 1501 tgtccggtag aacagaatgc ggaagaggct gtcaggattt atttttaaat tttggttacc 1561 atattcgatt tggcgtatat actaataacg taatatgtag acttagcctt tattttatta 1621 tgtattattg taacttgtaa ctgtcacatt gtttctgctg gaaaagatgg agagctttta 1681 cgtgtgtgga tggttgaatg gaaggatgaa tagataaaaa tgattgtgta acgtgttaat 1741 tactgtagga gaaataaaaa tgccaattct ttttcttctt cgaagaaa