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LOCUS XM_013252014 2610 bp mRNA linear INV 02-SEP-2023 (LOC106087098), transcript variant X2, mRNA. ACCESSION XM_013252014 VERSION XM_013252014.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013252014.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2610 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2610 /gene="LOC106087098" /note="nuclear RNA export factor 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:106087098" CDS 118..2088 /gene="LOC106087098" /codon_start=1 /product="nuclear RNA export factor 1 isoform X2" /protein_id="XP_013107468.2" /db_xref="GeneID:106087098" /translation="MPKPRGPRPNYNNTASGGSGSRFSALNDYQNEHDDRNNDGRKKE RNTTRRVSFKPSAFQNKGAIKGRVNELALRTRLEDDEDMDGLVTTLNYEDRSQGSRRK GSPIPKGKFGRGRKLSPSQFGWYQVTIQAGQRYSKDDLIRALLNSLSPDIFIPLYWRT EKNCVVFFVDDFAIALRLTQLERNVQMSDGYRLFIRVRDGYPLVSVDEPFKEKMKLAM AKRYNAHTKALDLTKFHADPDFRQIFVGLFRNPVLSAALDIIQKNIPDLEALNLNDNN LNSLESFKSIETRLPHLKILYLGGNNIASLAHLLVLRNVPIIDLVLKNNPLRQRYKDH ALYVSEVRRKFPKLVKLDGEDLEPQILFDVNDTSTMPKAQASFLCDASGADIIRQFLE QYFMIFDSDNRQPLLDAYHEQAMMSMSVPPASQAGRLNAFWKYNRNFRRIVNNDDVSR LRQLKVGRLPVVSNLAEWPKTQHDPQSFTVDLTLFTPKLISFTVAGLFKELESTTSTN GDIRYFQRQFVIVPAGGGFCIRNEMIFVTSATGQQARTFLKTPSVQASAAGTASNLPT TAAGSLQSRLQMQQPSTSAAALMSTPAPVPTQPDDATKMQMIQAMIAQSNMNMEWSRK CLEETNWDYNHAAFVFDKLNREGKIPPEAFIK" polyA_site 2610 /gene="LOC106087098" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tacacgcgcc atacattagc cattgaacga gatatatata tcaaagcgtg tttttctcct 61 tgaaaatatt gcaaagaaat taagaaattg tattaaatat accaatatcc cataagtatg 121 ccaaaaccca gaggaccgcg tccaaactat aataatacag ccagtggtgg ctcaggctct 181 cgtttttccg cattaaatga ttatcaaaat gaacacgacg atcgtaataa tgatggacgc 241 aaaaaagaac gcaataccac cagaagagtg agttttaagc cttcagcatt tcaaaataaa 301 ggcgctatta aaggccgagt caatgaattg gctttgcgta cccgtttgga agatgatgag 361 gatatggatg gtttggtgac aacattgaat tatgaagatc gttcacaagg atctcgccgc 421 aaaggctcac caatacccaa aggcaaattt ggtcgaggac gcaaactatc acctagtcaa 481 tttggatggt atcaagtcac gatacaagct ggccaacgct attccaagga tgatcttata 541 cgtgccttgc tcaacagtct ttcgcccgat atctttatac ccctctattg gcgtactgag 601 aagaattgcg ttgtcttctt cgtggatgat tttgccatag cattgcgtct cacccaactc 661 gagcgtaatg tacaaatgtc cgatggctat cgtctgttca tacgcgttcg agacggttat 721 cccttggtct cagtggatga gccatttaaa gagaaaatga aattagccat ggccaagaga 781 tacaatgcac atactaaggc tttagattta accaaattcc atgcagatcc cgattttcgc 841 caaatttttg tgggcctatt tcgtaaccct gtgttgtctg cagctttgga tatcattcaa 901 aagaatatac ccgatttgga ggctttgaat ttgaatgaca acaatttgaa ttccttggag 961 agttttaaga gcattgagac aagattgcca catttgaaaa tcttatattt gggaggcaac 1021 aatattgcct cattagccca tttgttggtc ttgcgcaacg tacccattat cgatttggtt 1081 ttgaaaaaca atccattacg tcaacgctat aaagatcatg ccctctatgt cagtgaagta 1141 cgacgtaaat ttcccaaatt agtgaaattg gatggtgaag atttggaacc ccaaattctt 1201 ttcgatgtca atgatacttc aactatgccc aaagctcaag cctcatttct atgtgatgct 1261 tcgggtgcag atattataag acaatttttg gaacaatatt ttatgatatt cgattcggat 1321 aatcgtcagc ccctactgga tgcatatcat gaacaagcca tgatgtctat gtcggtgccg 1381 ccagctagcc aagcaggaag gttaaatgcc ttctggaaat acaatcgtaa ttttcggcgt 1441 attgttaata atgatgatgt ttcacgtttg agacaattga aagtgggtcg tttgcctgta 1501 gtctcaaatc tggccgagtg gccaaaaacc caacatgatc cacaatcgtt tacagtcgat 1561 ttgactttat tcacgcccaa acttatctcc tttactgttg ctggtctctt caaagaattg 1621 gaatcgacca catcgacaaa tggagacatt cgctacttcc aaagacaatt tgttatagta 1681 cccgcaggcg gtggtttttg tatacgcaat gaaatgatat ttgttacaag tgctacaggg 1741 caacaggcgc gcacattctt gaaaacacca tcggtacagg cgtcagcagc tgggactgcc 1801 tcaaatttgc caacaacagc tgcaggcagt ctacaaagtc gcttacaaat gcaacagcca 1861 tcgacttctg ccgccgcttt aatgtcaact cccgccccag ttcccacgca acccgatgat 1921 gctacaaaaa tgcaaatgat tcaggctatg attgcccaaa gcaacatgaa catggagtgg 1981 agtaggaagt gtttggaaga aaccaattgg gactacaatc atgcagcttt tgtttttgac 2041 aaattaaaca gggagggtaa aatacctccg gaagctttta ttaaataaat aaatagttac 2101 atctagtttt attaagaaac ctctcgtttg ttgacttgca catttatttt gggaataatt 2161 gttcaaaccc tttttccagg gagagcattt taacagagtt gccttctttt aagcacaaaa 2221 agtagagttt aaactttaat ttctctctct ctctctctct ctccctcata ccctttactt 2281 tctctctatt ttataaattg aaaaggctat tattgaccaa ttacactctt gatttattgt 2341 tttctttttt ttaacaaaat tgaatatgca attgtgtgta tgaactttgt aatttttttt 2401 atacatttta tttagccagt tttatacaaa caacaacata tcctttaaat gtgtaatgtt 2461 tgttaattct atgatttttc tactaacaga ataccccaaa cttttttttt atacaccttg 2521 tatgtctcaa ttgatttcga tatgcaaaaa ttaaatcact aaggacaaaa aatttttcca 2581 cagacattaa agcacagcta ttaaaggatt