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LOCUS XM_013251895 1700 bp mRNA linear INV 02-SEP-2023 (LOC106087026), mRNA. ACCESSION XM_013251895 VERSION XM_013251895.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013251895.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1700 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1700 /gene="LOC106087026" /note="ras-related protein Rab-21; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins" /db_xref="GeneID:106087026" CDS 223..897 /gene="LOC106087026" /codon_start=1 /product="ras-related protein Rab-21" /protein_id="XP_013107349.1" /db_xref="GeneID:106087026" /translation="MTTNNQQPTQYNFKVVLLGEGCVGKTSIVCRYVEDKFNSQHIST LQASFLTKKVNLENGNKVQLNIWDTAGQERFHALGPIYYRGSHGAILVYDITDQDSFQ KVKNWVKELKRMLGAEIILTIAGNKIDLEEQRTVSEDDAIAYAESVGAHYFETSAKTN ENIDELFMELTRLMVQHAQQNNQRQRATAQQQFGQRRLIVEDSQDGNDDMQSQVPEGS RGSCCG" misc_feature 259..747 /gene="LOC106087026" /note="Rab GTPase family 21 (Rab21); Region: Rab21; cd04123" /db_xref="CDD:133323" misc_feature 259..264 /gene="LOC106087026" /note="Rab subfamily motif 1 (RabSF1); other site" /db_xref="CDD:133323" misc_feature 277..300 /gene="LOC106087026" /note="G1 box; other site" /db_xref="CDD:133323" misc_feature order(283..285,292..303,331..333,349..354,598..603, 607..609,688..696) /gene="LOC106087026" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:133323" misc_feature order(301..333,346..351) /gene="LOC106087026" /note="Rab subfamily motif 2 (RabSF2); other site" /db_xref="CDD:133323" misc_feature order(331..333,346..372) /gene="LOC106087026" /note="Switch I region; other site" /db_xref="CDD:133323" misc_feature order(346..348,358..381,403..405,409..411) /gene="LOC106087026" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:133323" misc_feature 352..354 /gene="LOC106087026" /note="G2 box; other site" /db_xref="CDD:133323" misc_feature order(355..357,361..369,415..417,421..423,442..447, 454..456,466..468,472..483) /gene="LOC106087026" /note="putative effector interaction site [active]" /db_xref="CDD:133323" misc_feature order(355..360,364..366,421..426,445..447,451..453, 457..465) /gene="LOC106087026" /note="putative GDI interaction site [polypeptide binding]; other site" /db_xref="CDD:133323" misc_feature 355..369 /gene="LOC106087026" /note="Rab family motif 1 (RabF1); other site" /db_xref="CDD:133323" misc_feature 409..423 /gene="LOC106087026" /note="Rab family motif 2 (RabF2); other site" /db_xref="CDD:133323" misc_feature 424..435 /gene="LOC106087026" /note="G3 box; other site" /db_xref="CDD:133323" misc_feature order(433..435,439..471) /gene="LOC106087026" /note="Switch II region; other site" /db_xref="CDD:133323" misc_feature 442..459 /gene="LOC106087026" /note="Rab family motif 3 (RabF3); other site" /db_xref="CDD:133323" misc_feature 466..480 /gene="LOC106087026" /note="Rab family motif 4 (RabF4); other site" /db_xref="CDD:133323" misc_feature 493..510 /gene="LOC106087026" /note="Rab family motif 5 (RabF5); other site" /db_xref="CDD:133323" misc_feature 577..591 /gene="LOC106087026" /note="Rab subfamily motif 3 (RabSF3); other site" /db_xref="CDD:133323" misc_feature 598..609 /gene="LOC106087026" /note="G4 box; other site" /db_xref="CDD:133323" misc_feature 688..696 /gene="LOC106087026" /note="G5 box; other site" /db_xref="CDD:133323" misc_feature 736..747 /gene="LOC106087026" /note="Rab subfamily motif 4 (RabSF4); other site" /db_xref="CDD:133323" polyA_site 1700 /gene="LOC106087026" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaacgcattg ttgttgtact attcatatta gttgttgaca ttttcgcctg catttaatta 61 aatttttcca caacagacca caatacaacc aagcgataaa aaaaaacacc aaacaaggct 121 acaaataaga aagttttaaa aaatttcggt gatttaaact cccccaaaag gcgaaatcca 181 tgtaaatctt aggaaaaagc gacaaatcaa tagagaaaaa atatgacgac taacaatcaa 241 caaccaacgc aatataattt taaggtggta ctactgggag aagggtgtgt gggcaaaaca 301 tcgattgttt gccgttatgt ggaggacaaa ttcaatagcc aacacattag cactttgcag 361 gcctcatttc tcaccaaaaa agtcaacctg gagaatggca acaaagtgca gttgaacatt 421 tgggatacag caggccagga gcgttttcat gcattgggac ccatctacta tagaggctca 481 cacggtgcca tactggtgta tgacatcacc gatcaggact cctttcagaa agtcaaaaat 541 tgggtaaagg aattgaaacg tatgttgggt gctgagatca ttctaactat tgcgggcaat 601 aaaatcgatc tggaagagca acgtacagtg agcgaagatg atgccattgc atatgccgaa 661 agtgtgggtg cccattactt tgagacgtcg gccaaaacaa atgaaaacat cgatgaatta 721 tttatggaat tgacaagact tatggtacaa catgcccagc aaaacaatca aagacaaagg 781 gccacggccc agcaacaatt tggccaaaga cgtttaattg tggaagattc acaagatggt 841 aacgatgata tgcagtcaca agtgcctgag ggttcacgtg gttcatgctg tggttgagtt 901 ggcgggtgtg atgcaaactg tcgcaaatta accaaatgta aacaaaaaca acaacatccc 961 aagcagctac agaagagaag aggaagaaga agagctaagt tttagatgtg tttactcctt 1021 gagttgtgat gagagactgg tgccaatgaa ttataacaaa caaaaccgca tgaatcacta 1081 ctcaaagagc ttaccaaaat tgaaacgaaa caaaacaaaa aagaaaccta aatgggatga 1141 cgatttatga ttaaaaccaa ttatgtgata aattattaag aaaacaaaaa ataacatatt 1201 tatatgtata acatttacta tatgaatctt tgttaatatt tgttgtacta tttaaaaaaa 1261 aaattttgta ctttaatttt cgttaatttc cttagacaaa aacatttgtt catctagtat 1321 tttgtcttta tgtataaaaa gaaaaaagaa gatagaaaat tattcctttg tatgtctagc 1381 aaagtagctt tagcttttac cctaaaactg aaaagagaaa aacaataccc ataaagatca 1441 cataatcacc ttgtgtgtat gtgtatagca aaatagctta tcttaatgat aatgtttatt 1501 actttgtctt actcgcctat atatatatct ctattcctta aacttgtata cctatgaaat 1561 taagtattgt atgaacaaaa gatcaacaac agctggcata tatgacatcg attttgttta 1621 tattaaaatt gcaaaacgat ggcaattaat attaagaagt gtgaataaag ttgaaagaaa 1681 taagaaacca gacaaattaa