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LOCUS XM_013251272 5397 bp mRNA linear INV 02-SEP-2023 (LOC106086547), mRNA. ACCESSION XM_013251272 VERSION XM_013251272.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013251272.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5397 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5397 /gene="LOC106086547" /note="multivesicular body subunit 12A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:106086547" CDS 447..1505 /gene="LOC106086547" /codon_start=1 /product="multivesicular body subunit 12A" /protein_id="XP_013106726.2" /db_xref="GeneID:106086547" /translation="MNKAGKHIQSGASNGPIIAPNSPLLHTTTTAMGSMAQKNVITSI MSFLPDNRPITSLHIVEDYEKCPKNFQSIHRTYDQDSDADLWRESNYLFGRQTTRYIC ISKTEGLPEYVVETLKVIAEKIAPPKEFSLLSRTADTDQKAWRKRQIAYKLSKRGTVT HAVTDIILCSKLKIAPEGFKLAGEINGILICYKTGAIPARLPPPVPGLGAPQNNQTSA GSSEVEKALNRLNLNNGIRNPKQPLPPVPNAEEHDYEEIVQSYQVNSPLRPAPRPPTA STSSGHSIGTLGTYTDVEGVPFVINPMLKSSKQNELSTLPQLSDFVIKKELDYDFQLE RQTLCAMKSSASKNPFFK" polyA_site 5397 /gene="LOC106086547" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atattttgcc tttggactgt gaggttgtct gcggtccgcg tttttcgtaa acgataatcc 61 gataactctc tcgcgataac aattgtaata aaaaatagca aattaataaa ttaaatgata 121 gaataacaac ttacaactta aacggaagcg cggataattg tggtgaatcg ttctcagccc 181 tcggaaaata aattaacttc attaaatatt gattatttgg tcaatagaga aacaaattgt 241 gcctctacaa cacataggtg cttcactggc taaatttgtt gccgttggaa aaagagcaag 301 ccagccgaaa aaaagactgc cttgaacgaa cggaaatata ggtgaaagtc actgataact 361 cacacatttg ctgctgctcg gcaacgcagc actcactctt caagctggcc accaaaacag 421 atgctttatt cgtattcagc aaagatatga ataaagcggg caaacacata cagtccgggg 481 ccagcaatgg ccccataata gcaccaaatt caccactgct gcatacgacg acgacggcaa 541 tgggctcaat ggcccaaaaa aatgtgatta catctataat gagctttctg ccagataatc 601 ggccaataac atcgctgcac attgttgagg attatgaaaa gtgtccaaaa aacttccaat 661 ccatccaccg tacttatgat caagactcgg atgcagattt atggcgtgaa agtaattatc 721 tttttggtcg ccagaccaca cgatacatat gcatctccaa gactgaggga ctgccagaat 781 atgttgttga aacgctgaag gttattgccg aaaagattgc accacccaaa gaattttcgc 841 tattatcacg tacggctgat acagatcaaa aagcctggcg taaacgacaa attgcctata 901 aactctcgaa gagaggtacc gtcacacatg ctgtaaccga cattatattg tgttcaaaat 961 taaaaattgc tcccgaaggc tttaaattgg caggtgaaat aaatggaatt ttaatatgtt 1021 acaaaaccgg tgccatacca gcacgtttgc cgcctccagt acccggtttg ggggcaccac 1081 aaaataatca aactagtgct ggcagcagtg aagtggagaa ggctttaaat cgtttgaact 1141 taaataatgg catacgaaat cccaaacagc ccttgccgcc agtgccaaat gccgaggagc 1201 atgactatga agaaattgta caatcgtatc aagttaattc cccgctaaga cccgccccca 1261 gaccacccac agctagtact tcttcgggtc atagcattgg aactttgggt acttacaccg 1321 atgttgaggg tgtaccattt gtgattaatc ccatgttgaa atcatccaaa caaaatgaac 1381 tatcaacact gccacagctc agcgattttg tgattaaaaa agaactcgac tatgattttc 1441 agctggagag acagaccttg tgtgccatga aatcatcggc ttccaaaaat ccttttttta 1501 aataataagg cccagcccta atttttagta gataagagaa aaaatctata gaaatagaag 1561 atagaaactc atgtttagag tttaaaatag ttgtagaata ttgacataca tatgtattta 1621 aaatatcaaa aaacatacat atatactata taaatacaca aagatatata tccatgtata 1681 cccatattat gtgtagacaa ctgcaaatgt ttctaaatcc attgtaaatt ccttaatttt 1741 taaattaagc ctttaattta tattctcaat atttgcaaat ttatattgtt ttgaactaac 1801 ttacactctt ttgtgatatt gttctttatt ttgtttgatt tttgcctatt ttgcaagaaa 1861 atctcaaatt ataacggcct tcacaaaact taatgtagat ttcaaatagg tttatttgac 1921 agatttcctt tattaaactg tcaaatagag ctatttctaa tatatattaa aatttgtcga 1981 taaagcctag tactgacttc cagttttcgt ccgaacaact gtcaaaacgc cctataataa 2041 ggcttttgcg aaacgactaa gacattttcc aaataagcag tactaagttc tttttaggga 2101 atgatttcaa catgttgcta gcaacattgt caaatttcgt aggtatacat gtatattaaa 2161 tgctacgaac ttaatgcatt ttgcttgctt ataattaatt acacttacat ctcccgcgaa 2221 tcttcctttg gtggccctat cttgcaagaa cgttgatatc gaagatcagt ttaaagaaat 2281 tgcggcagca tttgtaatgt ttatgacttg ttgtgctgcc aaacatgctg ctgctgctat 2341 ttctgaatct atctttttat gctaatgttc tttaatacaa gttagtcgcc tagtacttaa 2401 aaacttccaa tattgcgtaa gttttagttt ttggtttggt tgacagtcat atggtaacaa 2461 tgatgtcaac ctacaactgt tcactatcaa aacaacgctt tacacaaaaa aagtcaaaca 2521 aattagtaac actgttggaa acattattaa atttcacaat atttaattga tgtttagcac 2581 aattttcctc acaatcggag tcagtacaag gcttaaggct gtatatctat ttatagctct 2641 tgtggggttt ttaaacaaca tacataccca agttttgtat ttgataaacc aaaacagtta 2701 ttttttgtta gcaacatttc ataattctct aaaattttta atttaattaa tgtacataca 2761 tatattttaa gtttattatc catatttctc atgtatcatt aagcgtgtat acatgctgct 2821 acagccatct tgagattgtg tagaacctca catttacata gataagagaa tacagtcaag 2881 tttggaaaac gacagcctta gtgaaaaatt tctggaaggc tcatgaaatc tagattttct 2941 ctagacattt aagggaaagt ttcatgtaat aaattttttt cacttaaaga atgtggaatc 3001 accaagaaaa tctttaaact tctttgcatt ttcaataagc gttttagaaa tctttaggta 3061 gaagtaaaac ctagtcaaaa ttttatatta ggttagagac ggaaaaccag actgccaggg 3121 acggtacact gaatgtttac gatactcaaa tttggttatc tggtgtggct tcgagctctg 3181 gatcaggatt accgttgaga aatttttaaa aaggcagaaa aagggaattt tttttaaaaa 3241 agtatcacaa aaaacaagag gatcacaaac aattttaccc cctcaacacc attttccaaa 3301 atgcaaatta agcaaatttt tttgcataat tatgtttatg gaataacatg aaactagtac 3361 accactttgg gggaaagccc tcacccacaa aaccacaaaa ttgacatgta gcactattcg 3421 ggcaatgtcg gtgtcaaatg aaggataata gagttgagta tgaatagaaa gctattatat 3481 aaaaatgaaa gtgttacgct ttgtttgttt gttccgaata ggccgaaaaa cagctgaacc 3541 gtttttcatg aaaatttcac agttggcaga gtttagccca ctactgaaaa aagatacttc 3601 attttgtgat atccgcgagg gaggcgaacc cacccagtag tttaggttag gttaggttga 3661 aaagagggtg cagatattaa tccgccccat cccactatgg acatacacct aagccagtaa 3721 tcggcttgtt gtgcgttcta aaaactataa agtaacctct aagaagaaaa ttctaagtta 3781 ggaattccgc gctacttaca aaattcttag ttgttttcaa cacttaatgt ctggtattgt 3841 gtctccacct aagtgccggt atctgttaga cacgaaagca ggacaatggc aaaggaaatg 3901 ctccaccgtc tcatcatctt tcccgcatgc cctacacatg ctatcacttg ccgcagcgat 3961 tttacgaaag tgagctctta gtcttatgtg tcccgttatg ataccaatag ctatactgac 4021 ctccttctta cttcctttca gtaatagcct caccttctca cgatctggat ccccccatag 4081 gattttcgcc atcctaccga cggtttcgct gttccacaat gttgcatgcg cattcgtcgc 4141 ccactctctt aactcggact gtgtcgaccc gaaaggcttc gggttaacca aacttatact 4201 gtcgtcttgt ctttaccgcc aaatcgtctg ccccttcatt tccccttact ccgttatggc 4261 tcggcaccga aacgatgcgg atattgacaa tctgcttcaa caaagctatg ccccgctggt 4321 cgttacctga gagataatgc catgaattgt gaggcacact aaagtctcct tcttatgtcg 4381 ggcttgttag ccgggcgaag tgtcccaacc ctaaatgata ttagagagtt aaagaaggtg 4441 cagcggagcg ggccaggttc ggctagtatt taatataatt gacttataca gaaaattttt 4501 acaaaatgta taggaaattt ccaatatttt gtacctataa aaattttgtt ttttttttgt 4561 ttctatagaa aatgtaaaaa aaattatttc ttaggaattt tcgttatcac tttggatact 4621 ataaaatttt tgtttttatt cttattataa aatttaattg tacagaaaat ttttcaaaat 4681 gttatgtcta tttttattta tttatatata ttttttgcat tgttttatat tatttggata 4741 atcctttgaa cttgcattat tttgtagctt ttgttgaaac tagcaaataa atttatttaa 4801 tatcccccac tgcctcttcc cccctaaaca ttcttaagtg caaataataa ccttttctat 4861 aacccgtgcc tttcccatac cttttttctt ttaaagagcg tgtatagaaa gtcttttctt 4921 ccacaatagt tatttatttg tttgtaattc gtcaagaaaa aaagaaaaac aattcaagca 4981 atttaattac aacaaataca ttatgaaaat taaaaataca aaaagtcaaa taacaaagta 5041 tgtgatcgat ccaataaatt gtcataaacg ttttattctt aaaatacgta gaattattgc 5101 aaaaaacgag ttgaaattaa atatctttat aaagtagaac atagaacaca cagacacaca 5161 atatgctaac atttatgtat tcaaatttgg tcaaatatca gtagaaatta agagaaacca 5221 aatcgtggta tttattaggg tatcgatcga aagaattata ttaaggtatt agaagttgag 5281 tttcagattc tcatcaaaat gtaatttatt tttaacttaa agcaatgata tctacaaaaa 5341 gagcagtact attactactc atttattaaa atttaaataa aaataatata aaaatca