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LOCUS XM_013251053 1276 bp mRNA linear INV 02-SEP-2023 isomerase, mitochondrial (LOC106086397), mRNA. ACCESSION XM_013251053 VERSION XM_013251053.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013251053.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1276 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1276 /gene="LOC106086397" /note="delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:106086397" CDS 113..1072 /gene="LOC106086397" /codon_start=1 /product="delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial" /protein_id="XP_013106507.1" /db_xref="GeneID:106086397" /translation="MLLNNLRKTGMITRNLIAKSGSVSVTNQPTRAMAGILTEKVDRH AEYKNLAITVPKPFVVCVELNRAKRYNAFNKEMWIEIKHCFESLHTNPDCRVIVISGA GKHFSAGIDLNDMIKLGQDLADIDDVARKGHYLEPLIKLYQDSISSLENCSKPVIAAV HSACIGAGIDLITAADIRYCTEDAFFSVKEVDIGMAADVGTLQRLPKAIGSQSLAREL CYTGRRMESSEALSCGLVNRVFPEKEALLKAAIEMAEHIAQKSPIAVQTTKQNIVYSL SRPNQEGLDQIRIMNKLYLLSEDLAQAAAAQLTKDDKPTFSKL" misc_feature 248..1009 /gene="LOC106086397" /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase; Region: crotonase-like; cl23717" /db_xref="CDD:474030" misc_feature order(320..322,326..328,422..424,434..448,599..601, 605..613,677..682,689..691) /gene="LOC106086397" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature order(440..442,611..613) /gene="LOC106086397" /note="oxyanion hole (OAH) forming residues [active]" /db_xref="CDD:119339" misc_feature order(551..553,575..577,638..649,683..694,710..712, 716..724,728..733,749..754,758..763,767..772,779..781, 812..814,821..823,869..871,878..883) /gene="LOC106086397" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" polyA_site 1276 /gene="LOC106086397" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgacagatct cggcactgtc aatagaagat aaggccccta ctttttcatt tgtttaacgc 61 ttgggattaa agtttttttt taatctttag ataaacaact ttgtacaaga aaatgttgtt 121 aaataatcta cgcaaaactg ggatgataac acgcaattta atcgccaaaa gtggaagtgt 181 gtcagtaaca aatcaaccta caagggccat ggcagggatt ttgactgaaa aggtagatcg 241 ccatgcggag tataaaaatt tagcaattac agttccaaaa cctttcgtgg tttgtgttga 301 gctaaatagg gccaaacgtt acaatgcatt taataaggag atgtggattg aaatcaaaca 361 ttgctttgaa agcttgcaca ctaatccgga ttgtagagta attgtcatat caggcgccgg 421 caaacatttc agtgcgggta ttgatttgaa tgatatgata aaactcggtc aagacttggc 481 tgacatagat gacgttgcac gcaaagggca ctatttggag cctttaataa agttgtatca 541 ggattctatt agctctttgg agaactgttc aaagccagta attgctgccg tacattctgc 601 ctgcatcgga gctggtatcg acctaattac ggctgctgat attcgctatt gcacagagga 661 tgcatttttt tctgtgaaag aagttgacat tggtatggct gctgacgtgg gaacacttca 721 gcgtctgcca aaggccatcg gaagtcaatc gctggcaaga gagctatgtt acacaggcag 781 acgtatggag agctccgagg ctctaagttg cggtctagtc aatcgagtat ttcccgaaaa 841 ggaagctctc ttaaaggccg ccatagaaat ggccgagcat attgctcaaa aaagtccaat 901 tgctgtacaa accactaagc aaaatattgt atactccctc agtcggccaa accaggaagg 961 acttgatcaa attcgtataa tgaacaaact atacctacta tctgaagatt tggcacaagc 1021 tgcagcggca caacttacaa aggatgataa gcccacattt tccaaactgt aaatttattt 1081 aaatctattt atacatataa taaatatcta catcagtgca tcatttgggt taacctctcc 1141 atgttaacgg catacacaga atgagaaggt ataagattat gatcgatgaa cgcacgttgg 1201 cagtctttca acgtgatttc tttggtcttc ttagcttctc tgcaatatga aataaatttt 1261 ttatacaata aatcaa