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LOCUS XM_013251012 4971 bp mRNA linear INV 02-SEP-2023 with thrombospondin motifs 6 (LOC106086369), transcript variant X1, mRNA. ACCESSION XM_013251012 VERSION XM_013251012.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013251012.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4971 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4971 /gene="LOC106086369" /note="A disintegrin and metalloproteinase with thrombospondin motifs 6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106086369" CDS 1150..4431 /gene="LOC106086369" /codon_start=1 /product="A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X1" /protein_id="XP_013106466.2" /db_xref="GeneID:106086369" /translation="MESHKRLKVIICLLVTTSTWLVYGAEQLLIGLHSDELISGELII PRKVTKSGEFISHNLIHHHGQHYKHNRKRRSLDDANLEPEVHYHVDIKNETLHLELEP HSYFMTPHLIVERHRRDVRTRKHLDMHTNCHYHGRIKDQPDSRVALSACNGLVGHIKT ENNEYYIEPSKPHASSAHNVNGHPHVVFQRSSVKEKQSAQQTNDKRKQQQNRRKQQQL QQQRNKLQQNGTKRQRRSLSNCGTKEPRRRIEARLVEWQPQGKVKIQGGRKIRRLHHQ QSQYKYETTTTDVKQQENQEQQQQQQHSHHFFQSHKQSHSSNNHKESQRILTSDTPPT IAFAPQAKPPSHWQHQQQPPYIHSNNDIGAHAHHHQRMKRSISSPRHVETLIVADSTM VAFHAKEVELYLLTIMNMVSALYKDPSIGNAIEIVVVKIILLDEEEAHIDLNLTQNAQ QNLDKFCSWQHKLNSGNEFDPHHHDVAVLITRKNICGNNCMTLGLANVGGMCKPKQSC SVNEDNGIMLSHTIAHELGHNFGMFHDTAKIGCHPRVGSIVHIMTPTFGADTLQVCWS NCSRKFITHFLDQGLGDCLDDEPTPLDEYAYPEEQPGKKYNAELQCRLQYNVTDSEVC SPMFEICSTLWCKVNGECITNMRPTAPGTMCGKRKWCQNGKCVRIESMEKVDGSWGNW SEWSECSRSCGGGVSIQQRECDSPRPANGGTFCIGERKKYKICNHQPCPKNEPSFRAL QCAKYNKKPYQGQFYKWLPYFDKQNPCKLYCNDEDDTIIANWGDVVLDGTPCTLGTNN MCIDGICRKVGCDWIVDSDEQEDRCGVCGGEGLECKTVKYVYNDTLKVSEGYVEIVVL PAKARHIIIKELGNSPHFLGVAKSNSSQFYLNGDSLISMPGEFAIAGAESFYDRIDDQ EIIKIPQPIQHSIAIYNIVRGDEPNEGIYYEFTLPALNASSSKHYLWKLSEWTQCSVT CGGGLQYREPICYENGRITSDTELCWAFAKNPRPQRLTKKCSSLPCPAHWLTGPWQFC PVTCRNPDDPLPVRRRSVMCLDPHDVILDDERCNPSTRPNDTDYCESNLPDCSIREKF KNRYS" polyA_site 4971 /gene="LOC106086369" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 taagaccgca ggagcgcgcg cttgggtcga aaaaactgtt tgagtgaata gacggagcac 61 agaggcttcc ttcttcagca aataaaaccg aaatacaaaa aacaaataaa aaaaagaact 121 tcgaggaaaa gtgttttttt ggtctgttga ctttatttgt gctttgcggt tatttgtgtt 181 tttttgctct ttggggctgt tgtttggcat ggaccacgtg aaaatctaaa gttcttttta 241 aagaatttct tcaagagaaa aaccaaaaat tcctatgaat tcgagaatat ttcatgggga 301 aaaataacat aaatcatatt ttgttgatca cattcttgaa attttaaaca aattttttgt 361 tattgtgtct ttgctggttc acggattgca gtggttgaca tacacataaa tatagtttgt 421 gagtgttttt ttttcttcta aaagtgagtg aaataatatg gaaaaaatta agaaaataaa 481 ttggcgaaaa atgtgtatgg aaaaaaattc agcaatctat aaacttgcct gtgtcgccgt 541 gaccacaaac aacgccaaac gttggcgctt gttcgccgcc acggtcgctc agtaattgtc 601 tccgccggcc gctattgttt taccatagcc caaaatgatt cactgaaaac gaaaaacaaa 661 aaaaaaaaaa aacaaaaaca aataaaaata acaaaatata aaataaaaac accataccca 721 cagaggcaga gataactttg ttttgatggc gttattgtct attcgattcg attgtaactt 781 taattgacgg tgtacgggat acgcgtgtgt tacctttttt gagttttaat gtgtgctaat 841 tattcgttcc attttcggca gatgacttaa atggcaattg tcgcttccta acactatgct 901 gcacattttt aaagttataa tcagaaattg catacttcaa attacaaaaa aatgccctac 961 gtgcaatgtt aatacaaatt atgtataaat cgaacaagat cattgataat ggataatccc 1021 tacgacgaaa attgtgaatt attctcaaaa gtgagagaca gtaattgact aacagcggag 1081 aaaagattaa catttcttgc catattctga aggaacggaa aacagaattt taactcgaat 1141 aaataaatca tggaatcaca caaacgttta aaagtcatca tttgcctgct ggtcacaacc 1201 tcaacatggc ttgtttatgg agctgaacaa ttactcattg gcctgcactc ggacgaactg 1261 atatctggag aacttataat accgcgaaaa gtcactaaaa gtggagagtt tatatcgcac 1321 aacctcatac atcatcatgg gcaacattac aaacataatc gcaaacgtcg tagtttagac 1381 gatgcaaatc tcgaacctga ggtccactat catgtggaca ttaaaaatga gacattacat 1441 ctggaactag aacctcacag ttattttatg acaccacatt tgatagttga aagacatcga 1501 agggatgtaa ggacacgcaa acatttggat atgcatacaa attgtcatta ccatgggcgt 1561 attaaggatc agccggattc aagggtggcc ttgtcagctt gtaatggtct ggttggtcac 1621 ataaaaactg aaaataatga atattatatt gagccatcaa aacctcatgc ttcatcggcc 1681 cacaatgtta acggacatcc gcatgttgta tttcaaagat catctgttaa ggaaaagcaa 1741 tctgcacagc agacaaacga caaaaggaag caacagcaaa atagacgtaa gcagcagcaa 1801 ttgcaacagc aacgtaataa attgcagcaa aatggaacaa agcgtcaaag gagatcttta 1861 agtaattgtg gcaccaagga gccaagaagg cgcatagaag cacgacttgt ggaatggcaa 1921 ccacagggaa aggtaaaaat tcaaggtggc agaaaaatac gaaggctgca tcatcagcaa 1981 tcgcaatata aatatgagac tacaacaacg gatgtaaaac agcaagaaaa ccaagaacag 2041 caacaacaac aacaacattc tcatcacttt ttccagtcgc ataagcaatc ccattcgagt 2101 aacaaccaca aagaaagcca acgcatcttg acatcagaca caccaccgac aattgccttt 2161 gcaccacaag caaaaccacc atcacattgg caacatcagc agcaaccgcc ttacattcac 2221 agcaacaacg acatcggtgc gcatgcgcat caccatcaac gcatgaaacg ttcaattagc 2281 agcccacgcc atgttgagac tctaattgta gccgattcca caatggttgc ctttcatgcc 2341 aaagaggtgg agttatatct tttgaccata atgaatatgg tctcagctct ctacaaagat 2401 cctagcattg gcaatgctat tgaaattgtt gtggttaaga tcatacttct ggatgaggag 2461 gaagctcata tagatttgaa tcttacacaa aatgctcaac agaatttgga taagttctgt 2521 agttggcagc ataaattgaa cagcggcaat gaatttgatc ctcatcatca tgatgtagcc 2581 gttttaataa cacgcaaaaa tatatgcggc aataactgta tgaccctcgg tttggccaat 2641 gtgggcggca tgtgcaaacc caaacagtct tgcagtgtta atgaagataa tggcattatg 2701 ctctcacata ccatagctca tgaattggga cacaattttg gcatgttcca tgatacggca 2761 aaaattggtt gccatccacg tgtgggttcc atagttcaca ttatgacgcc aacatttggt 2821 gcggatactc tgcaagtctg ttggtcaaat tgtagtcgca aatttataac acacttcttg 2881 gatcaaggtt taggcgattg tttggatgat gagcccaccc ccttggatga gtacgcctat 2941 cccgaggaac aaccaggaaa aaaatacaat gccgaattgc aatgtcgtct gcaatataat 3001 gtaacggaca gtgaagtctg ctcgcccatg tttgagattt gctcgactct gtggtgcaaa 3061 gtaaatggcg aatgcattac aaatatgcga ccaactgctc cggggacaat gtgtggaaaa 3121 cgtaagtggt gtcaaaatgg aaaatgtgtt cgcattgaat caatggaaaa agtcgatgga 3181 tcttggggca attggtctga atggagcgaa tgttctcgct cctgcggcgg tggtgtctcc 3241 atacaacaga gggaatgcga tagtcctcgc ccagcaaatg gtggaacatt ttgcattggc 3301 gagaggaaaa aatataagat ttgcaatcat cagccatgtc ccaagaacga acccagtttc 3361 agggccctac agtgtgcgaa atataataaa aagccatatc aaggacaatt ctataaatgg 3421 ctgccttact ttgacaaaca aaacccttgt aaattgtatt gcaatgatga agatgacacc 3481 attatagcca attggggtga tgtggtgctg gatggcacac cctgcacatt gggcaccaat 3541 aacatgtgca ttgatggcat ttgtaggaaa gttggttgcg attggattgt tgattcggat 3601 gagcaagaag atcgttgcgg tgtctgtggc ggtgaaggac ttgagtgcaa aacggtaaaa 3661 tatgtctaca acgacactct taaggtcagc gaaggatatg tggaaatagt agttttgcct 3721 gctaaagcac gccatataat tatcaaggag ttgggaaatt caccacattt tctgggtgtc 3781 gcaaagtcaa atagtagcca attttatttg aatggcgaca gtttgatatc aatgccagga 3841 gaatttgcca tagccggtgc agaaagtttc tatgatcgca tagatgatca agagataatt 3901 aaaataccac agcccataca acattccata gctatatata atatcgtgcg aggcgatgaa 3961 cccaatgagg gcatttacta tgagtttacc ttacccgcct taaatgccag ctcttccaaa 4021 cactatttgt ggaaattgag tgaatggact caatgttcgg tgacatgtgg tggaggtttg 4081 caatatcgtg aacccatttg ctatgaaaat ggaagaatta cctcggatac cgaactttgc 4141 tgggcttttg ccaaaaatcc acgacctcag cggctgacga aaaaatgcag tagcctacca 4201 tgtccggctc attggttgac agggccatgg caattttgcc ctgtcacctg ccgaaatccc 4261 gatgatccat tgccagtgcg caggcgctct gtcatgtgtc tggatccgca tgatgtcatt 4321 ttggatgatg agagatgtaa tccgtccacc agacccaacg atacggatta ttgtgaatcc 4381 aatttacccg attgtagtat aagagaaaaa ttcaaaaatc gctatagtta agacagatgg 4441 tttagtttaa gtaattgagg gatgtagaag ttcgttaagg ttactactct agagatttta 4501 ggtttagtta attttttgca aatataataa cgcaattaaa taattttgta aaggtggagt 4561 tggataccac taaaaatgca actctgcaat catatcccac aaaacctacg cgcaaacgtt 4621 aagaattttc aactttgacg attgcgtcat tctgtgttgc catgcatgaa gttgtgtgtt 4681 tttaggcgcc aaagttcaaa attctttgac ttttgcgcat cgcttttgtg ggatttgttt 4741 gtagagttgc atttttaatg cgcgcgcata gtatgtaact ccacgttgag ttgtgggacg 4801 ttttggtgcg taggctgtca agctcaccta cgtatcaaaa ctactgagtt caaattcggg 4861 tttcaaaccc gggtttcagc aatagtcgtt ccatcaatgc catctattgc caattaagaa 4921 caacttttcg ttttccaaat tcaataattt caaatacaaa ttcgaactat a