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LOCUS XM_013250929 2939 bp mRNA linear INV 02-SEP-2023 p115 (LOC106086306), mRNA. ACCESSION XM_013250929 VERSION XM_013250929.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250929.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2939 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2939 /gene="LOC106086306" /note="general vesicular transport factor p115; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106086306" CDS 129..2720 /gene="LOC106086306" /codon_start=1 /product="general vesicular transport factor p115" /protein_id="XP_013106383.1" /db_xref="GeneID:106086306" /translation="MDFLKSGFKTVLGATEPGQPPSAAETVEKLVDRAASSTLLEDRR DACRALKALSRKYRIEVGAQGMPALIQVLQNDCQDCEIISYALDTLCNIVASEEFEEE ADNPTVSVNVGEQFTEMFIKSPDNVSCVMGYLEEYDFRVRRAAIQLLTTLIQNKTRDL QELVLVSPMGVSKLMDLLSDSREVIRNDALLLLIQMTKGNSNIQKIVAFENAFDKIFD VIRDEGCADGGIVVEDCLILLLNLLKNNSSNQQFFKEGSYIQRLAPMFELSNKESGEM GWAPQKMSNVHCMLQVIRSLVTPSNQQQVVSSCQKAMRQSKLLEALCEILMGSGVPAD ILTETINAVAEVARGDPDNQEQLSKVMAPSTPPRPVIVVLLMSMINEKQLLALRCSVL YSFQCYLFRNPACQQAVVSTLLPSSATDVSSLSTGQLLCNGLFSTDSMANWFSAVALM HTLVDNTAQKEELLRVLLATSAGAHKPVTLLEQCTNLLQQESYKLQSKVGLLMLLSMW VAHCPTAVKTLLQTQGTMAYLTAQISGNEHDENEYLVQGLCAFLMGLCIQFNDNSLTG QKRDDICQLIIKRIGQEHFCNKLNEVSRHEAYSRACKQPQIRAKSAMELLLDYEYCKL FKGLEALVVKMVTGFDVNGIELTELTLSSEASALVAQYKGIIRGLDNQITTLQETVKQ LEAKKSAQEQKLNEVQNLNHQLTDQNTLLKAQLSARKNNDSLSTNSSTPHNDNNSPPN NVTLEALNAAQFQTNLYYTENLRLQQELDNLRKRLQDATDMANMANENYQKLQKDQED LLELLTDQENKIQRYAEQMRSAGLPVEDDVDLEDSNSDENINSNHSSSNANSLTDTSP QHVTKNI" misc_feature 957..1133 /gene="LOC106086306" /note="Armadillo tether-repeat of vescicular transport factor; Region: Arm_vescicular; pfam18770" /db_xref="CDD:465861" misc_feature 1182..2015 /gene="LOC106086306" /note="Uso1 / p115 like vesicle tethering protein, head region; Region: Uso1_p115_head; pfam04869" /db_xref="CDD:461460" misc_feature 2205..2639 /gene="LOC106086306" /note="Uso1 / p115 like vesicle tethering protein, C terminal region; Region: Uso1_p115_C; pfam04871" /db_xref="CDD:461461" polyA_site 2939 /gene="LOC106086306" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgggatccc tagtgtaatc gatgcgtgtc agaatttgga ttaggaattg ggttggtaga 61 ggcaatatag gaaaaaagta tttcatgtaa acgaaaattt agatagtgaa taagttcccg 121 aggatctaat ggatttcttg aaaagtggat tcaaaactgt tctcggcgct accgaaccgg 181 gtcaaccgcc tagcgctgcg gaaacagttg agaaattagt ggacagagca gcatcatcaa 241 ccttattgga ggatcgtcga gatgcatgcc gtgctttgaa ggctctatcc agaaaatatc 301 gcattgaagt aggtgcccag ggtatgccag cattgattca agttctgcag aatgattgcc 361 aagactgtga aataatatca tatgctctgg acactttgtg caatatagta gctagcgaag 421 agttcgaaga agaagccgac aatcccacgg tgtctgtaaa tgttggagag caatttactg 481 aaatgtttat aaagagccca gataatgtgt cttgtgtgat gggatacttg gaagagtatg 541 actttcgggt acgcagggcg gcgatacaat tgctcacaac tttgatacaa aataaaacgc 601 gggatctaca agaactggtg ttggtgagtc caatgggcgt atccaaactc atggaccttc 661 tttccgatag tcgtgaggta atacgaaacg acgcattgct acttctgatt caaatgacta 721 agggtaactc gaacatccaa aaaattgttg ccttcgaaaa tgcattcgat aaaattttcg 781 atgtaataag agatgaaggt tgtgccgacg gaggtattgt cgttgaagat tgcttaatat 841 tgttgttaaa tttgctgaaa aacaattcca gcaaccaaca atttttcaaa gagggttcct 901 acatccagcg cttggcccca atgtttgaat tatccaacaa agagagtgga gagatgggtt 961 gggccccaca gaaaatgtca aatgttcatt gtatgttgca agtgataagg tcgctagtaa 1021 cacctagcaa tcagcagcag gttgtatctt catgccaaaa agccatgaga caatctaagc 1081 ttttggaagc attatgtgag atacttatgg gtagcggagt tccagctgac attcttactg 1141 aaactataaa tgctgtagct gaagtggcga gaggcgatcc agataatcag gagcaattaa 1201 gcaaagttat ggctcccagt acaccaccac gaccagttat tgtagtactt ttaatgtcga 1261 tgatcaatga gaaacaattg ttggcattgc gttgctccgt tttgtattcg tttcaatgct 1321 atttattccg caatccagcg tgtcaacaag ctgtagtttc gacgttattg ccatcatcgg 1381 caaccgatgt ctcaagtctt tccactggac aactattgtg taatggtctt ttctcgacag 1441 attcaatggc aaattggttt tcggctgtgg ctcttatgca cactttagtc gataacacag 1501 cacaaaaaga ggagcttttg agggtattgt tggcaacatc tgccggcgcc cataaacccg 1561 taacattgct agaacaatgt accaatctgt tgcaacaaga atcatataaa cttcaaagca 1621 aagttggact tttaatgtta ttgagcatgt gggtagccca ttgtcccact gcagtaaaaa 1681 ctctcctcca aactcaaggc actatggctt atttgactgc gcaaatcagc ggcaatgagc 1741 atgatgaaaa cgaatatcta gtccagggat tgtgtgcctt tctgatgggt ctctgcatac 1801 aattcaatga taactcttta actggacaga aacgcgatga catttgtcag ttgatcatca 1861 aacgcatagg tcaagaacat ttttgcaata aactcaatga agtgtcaagg catgaggctt 1921 acagcagagc ctgcaaacaa cctcaaatta gagccaagtc cgccatggaa ttactcttag 1981 attacgaata ctgcaaactt tttaagggac ttgaagcttt ggtggtaaaa atggtaaccg 2041 gatttgacgt taatgggatt gaattaacgg aactcacact tagttcggaa gcatcggcat 2101 tggttgccca gtataagggt attatacgag gtttggataa tcagatcaca actctccaag 2161 agaccgtaaa acaactcgaa gcgaagaaat ctgcacaaga acaaaaacta aatgaggttc 2221 aaaacctgaa tcatcaactc actgatcaga atacactgct aaaggctcag ttgtcggctc 2281 gaaaaaataa cgactcttta tcaaccaatt catcaactcc tcataatgac aataattccc 2341 ctccaaataa tgttacactc gaagccttaa atgcagccca atttcaaaca aacctttatt 2401 atacggaaaa cttgcgccta caacaggagc tcgataattt gcgaaaacgt ttacaggatg 2461 caacagatat ggcgaacatg gccaatgaaa actatcaaaa attgcaaaaa gaccaagagg 2521 acttgctgga gctactaacg gaccaggaaa ataaaataca gcgttatgcg gagcaaatgc 2581 ggtcagcagg tctgcccgtt gaagacgatg tcgatttgga agatagcaac agtgatgaga 2641 atattaattc caatcattcc agttcaaatg cgaattcttt gactgacaca agtccgcaac 2701 atgtaacaaa aaatatatga acaatgcgaa aaccatgcct ttaaggaaag tttatgatag 2761 aaaaaattta gatatatttc aggaagcgat atagtagagt tcccacttcc tacgtcgttt 2821 aagtaatgca tccgaaacca agaagaaata acaaaatagt taagcaatgt taaatgttct 2881 tgtcgtaata ataaaaatat atgaaaaaca ataaaatgga aaaatattcc aatgtagaa