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LOCUS XM_013250913 2323 bp mRNA linear INV 02-SEP-2023 transporter 1 (LOC106086295), transcript variant X2, mRNA. ACCESSION XM_013250913 VERSION XM_013250913.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250913.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2323 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2323 /gene="LOC106086295" /note="sodium-dependent nutrient amino acid transporter 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins" /db_xref="GeneID:106086295" CDS 356..2230 /gene="LOC106086295" /codon_start=1 /product="sodium-dependent nutrient amino acid transporter 1 isoform X1" /protein_id="XP_013106367.1" /db_xref="GeneID:106086295" /translation="MDVKTNEDSGRVTTTVSIELSNNTNQKKTKDKDDNADDRPNWSN GLEFLMSCISMSVGLGNIWRFPFTAYENGGGAFLIPYLIVLFLIGKPMYYLEMIMGQF TSKGSVKAWSICPSFLGVGYGQAFGTLSIITYYSSLIALTLYYMIVSCQAILPWTYCR DEWENCVDSMPKEDTLQFPNDTSNKLTSSSELYFIEIVSKEKDQIDDGLGSPDLYLTL TLFASWIVIFLVIRNGVKSSGKAAYFLALFPYVVLIALLIRAVTLEGAVDGILFFLEP DWGQLANLKVWKEAVVQCFFSLAVGIGPIIMFSSYNRFDHPIYRDAMIVTSLDTLTSM LAGITIFGILGNLAHNLKVSDIKEVVQSGTALAFISYPDAIAKFQAVPQFFAVLFFFM LFVLGVGSIVALQSTIVTIICDQFKSTKYWVVALICSIGGFLLGLVYVTPGGQWILNL VDFYGGTYVVFALAILEIVGIIWIYGLQNFCDDVEFMTNRKVSIYWRLCWSFLTPVMM IVIFVYSMVTIEPLTYKKIEYPEAANIAGWVIFAIGIAQFPLWGWWYIKTHYKDSFMN TLRTSLRSSEEWGPKNPETRAKWIAYKEALALERGKKLSSNKFGFFKQKVYNISVGKN " misc_feature 476..1903 /gene="LOC106086295" /note="Solute carrier 6 family, neurotransmitter transporters; solute-binding domain; Region: SLC6sbd; cd10324" /db_xref="CDD:271359" misc_feature order(515..517,524..526,1541..1543,1550..1555) /gene="LOC106086295" /note="Na binding site 2 [ion binding]; other site" /db_xref="CDD:271359" misc_feature order(521..523,527..538,758..760,1241..1246,1259..1261, 1265..1267,1553..1555,1562..1567) /gene="LOC106086295" /note="substrate binding site 1 [chemical binding]; other site" /db_xref="CDD:271359" misc_feature order(521..523,536..538,1244..1246,1340..1342) /gene="LOC106086295" /note="Na binding site 1 [ion binding]; other site" /db_xref="CDD:271359" misc_feature order(542..547,755..757,767..769,776..778,1445..1447, 1457..1459) /gene="LOC106086295" /note="substrate binding site 2 [chemical binding]; other site" /db_xref="CDD:271359" polyA_site 2323 /gene="LOC106086295" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggctggttgg agtatacgct gcacgctttg cagctaccaa aactaagctt atttcgataa 61 tattttgccg caacggaaaa catttcagtt caatttattc aattgttaaa gttaggtcga 121 agcgatcggt agtgccgttg aaaccctcca acaactcgca tctgccctcg ccaatcggtt 181 gcgtgttcca agcgaagttt tgtgcgaggt gttcgaaaac cgtttcgtgt ttggatattt 241 gagtgttatc aaaacttttc gattaattgc aataaaaaac gtgttaacta aaacgcaaaa 301 acgcacatag aataaaacta acatttgctg taaaattgtg gtgcttctga aaaaaatgga 361 tgttaaaact aatgaagaca gcggccgagt tacaaccaca gtgtctattg aactttccaa 421 taacaccaat cagaaaaaga ctaaagacaa ggatgataac gccgatgata gacctaattg 481 gtcaaatggt cttgaatttc ttatgtcctg catttcgatg tctgttggat tgggtaacat 541 ttggcgcttt ccctttacgg cctatgagaa tggaggagga gcttttttaa ttccatattt 601 gatagtactt ttcctcatag gcaaacccat gtactatctg gagatgatta tgggacaatt 661 tacgagcaaa ggctctgtaa aagcatggtc tatatgtcca tcgtttttag gtgtgggcta 721 tggtcaagca tttggcacat tgtccattat aacgtactat tcatctttaa ttgctctgac 781 tttgtactat atgatcgtat cttgtcaagc gattctccct tggacatatt gtcgcgacga 841 atgggaaaat tgtgtagatt caatgccaaa agaagacaca ttgcaatttc ccaatgacac 901 atcaaataaa ttgaccagca gttcggagtt gtactttatt gaaattgtat caaaggaaaa 961 ggatcaaata gatgacggcc tgggatctcc cgatttgtat ttaacgttga cgttatttgc 1021 atcatggatc gttatttttc tcgttatacg taatggtgtt aagagttccg gaaaagctgc 1081 atactttttg gcgttatttc cctacgtagt tctcattgct ttattaatac gcgcggtaac 1141 cttggagggt gccgtggatg ggattttatt ctttttggaa cctgactggg gtcagttggc 1201 aaacttaaag gtttggaagg aagctgttgt ccagtgcttt ttttctctgg cagttggcat 1261 tggcccgata atcatgtttt cgtcctacaa ccgatttgat catccaattt acagagatgc 1321 catgattgtt accagcttag atacgttgac cagtatgttg gcgggtatta caattttcgg 1381 aatattgggc aatctggcgc ataatcttaa ggtgtccgat ataaaggagg tggttcaaag 1441 tggcactgca ttggcattta tatcgtatcc agatgctatt gcgaaatttc aggctgttcc 1501 tcaatttttc gcagttcttt tcttcttcat gctgttcgtt ttgggagtgg gctctattgt 1561 agctctgcag agcacaattg tcaccattat atgtgatcag ttcaagtcca cgaaatattg 1621 ggttgttgct ttgatttgtt caataggtgg atttctattg ggtttggttt atgtgacccc 1681 aggtggccag tggattttaa atttggttga cttttacggt ggaacatacg tggtatttgc 1741 cttggcgatt ttggaaattg ttggaattat ttggatttac ggtttacaaa atttctgtga 1801 tgatgttgaa tttatgacaa acagaaaagt gtcgatatat tggcgtctat gttggtcatt 1861 cctaacgcct gttatgatga tagtcatttt tgtctactcc atggtcacca ttgaaccttt 1921 aacatacaag aaaattgaat atccagaagc agcaaatatt gctggttggg taatatttgc 1981 cattggcatt gctcagtttc ctttatgggg ttggtggtat attaaaaccc attacaagga 2041 ttcattcatg aatacattga gaacttcttt aagatcttct gaggagtggg gaccaaagaa 2101 cccagaaaca cgggccaaat ggatagctta taaagaagct ttagctttgg aacgggggaa 2161 aaagttgtca agcaataaat ttggattctt taagcaaaaa gtttacaaca tatcagtagg 2221 aaaaaattaa aaaaaagtta atcaatcgac agtattaata tagcaactaa caaatgtatg 2281 tatgtatgta tataaattaa atgttactta aatatttgca tta