Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013250912 2358 bp mRNA linear INV 02-SEP-2023 transporter 1 (LOC106086295), transcript variant X1, mRNA. ACCESSION XM_013250912 VERSION XM_013250912.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250912.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2358 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2358 /gene="LOC106086295" /note="sodium-dependent nutrient amino acid transporter 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins" /db_xref="GeneID:106086295" CDS 391..2265 /gene="LOC106086295" /codon_start=1 /product="sodium-dependent nutrient amino acid transporter 1 isoform X1" /protein_id="XP_013106366.1" /db_xref="GeneID:106086295" /translation="MDVKTNEDSGRVTTTVSIELSNNTNQKKTKDKDDNADDRPNWSN GLEFLMSCISMSVGLGNIWRFPFTAYENGGGAFLIPYLIVLFLIGKPMYYLEMIMGQF TSKGSVKAWSICPSFLGVGYGQAFGTLSIITYYSSLIALTLYYMIVSCQAILPWTYCR DEWENCVDSMPKEDTLQFPNDTSNKLTSSSELYFIEIVSKEKDQIDDGLGSPDLYLTL TLFASWIVIFLVIRNGVKSSGKAAYFLALFPYVVLIALLIRAVTLEGAVDGILFFLEP DWGQLANLKVWKEAVVQCFFSLAVGIGPIIMFSSYNRFDHPIYRDAMIVTSLDTLTSM LAGITIFGILGNLAHNLKVSDIKEVVQSGTALAFISYPDAIAKFQAVPQFFAVLFFFM LFVLGVGSIVALQSTIVTIICDQFKSTKYWVVALICSIGGFLLGLVYVTPGGQWILNL VDFYGGTYVVFALAILEIVGIIWIYGLQNFCDDVEFMTNRKVSIYWRLCWSFLTPVMM IVIFVYSMVTIEPLTYKKIEYPEAANIAGWVIFAIGIAQFPLWGWWYIKTHYKDSFMN TLRTSLRSSEEWGPKNPETRAKWIAYKEALALERGKKLSSNKFGFFKQKVYNISVGKN " misc_feature 511..1938 /gene="LOC106086295" /note="Solute carrier 6 family, neurotransmitter transporters; solute-binding domain; Region: SLC6sbd; cd10324" /db_xref="CDD:271359" misc_feature order(550..552,559..561,1576..1578,1585..1590) /gene="LOC106086295" /note="Na binding site 2 [ion binding]; other site" /db_xref="CDD:271359" misc_feature order(556..558,562..573,793..795,1276..1281,1294..1296, 1300..1302,1588..1590,1597..1602) /gene="LOC106086295" /note="substrate binding site 1 [chemical binding]; other site" /db_xref="CDD:271359" misc_feature order(556..558,571..573,1279..1281,1375..1377) /gene="LOC106086295" /note="Na binding site 1 [ion binding]; other site" /db_xref="CDD:271359" misc_feature order(577..582,790..792,802..804,811..813,1480..1482, 1492..1494) /gene="LOC106086295" /note="substrate binding site 2 [chemical binding]; other site" /db_xref="CDD:271359" polyA_site 2358 /gene="LOC106086295" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggctggttgg agtatacgct gcacgctttg cagctaccaa aactaagctt atttcgataa 61 tattttgccg caacggaaaa catttcagtt caatttattc aattgttaaa gttaggtcga 121 agcgatcggt agtgccgttg aaaccctcca acaactcgca tctgccctcg ccaatcggtt 181 gcgtgttcca agcgaagttt tgtgcgaggt gttcgaaaac cgtttcgtgt ttggatattt 241 gagtgttatc aaaactttgt gagacaatta tattcattta tggaagaata ctttcgatta 301 attgcaataa aaaacgtgtt aactaaaacg caaaaacgca catagaataa aactaacatt 361 tgctgtaaaa ttgtggtgct tctgaaaaaa atggatgtta aaactaatga agacagcggc 421 cgagttacaa ccacagtgtc tattgaactt tccaataaca ccaatcagaa aaagactaaa 481 gacaaggatg ataacgccga tgatagacct aattggtcaa atggtcttga atttcttatg 541 tcctgcattt cgatgtctgt tggattgggt aacatttggc gctttccctt tacggcctat 601 gagaatggag gaggagcttt tttaattcca tatttgatag tacttttcct cataggcaaa 661 cccatgtact atctggagat gattatggga caatttacga gcaaaggctc tgtaaaagca 721 tggtctatat gtccatcgtt tttaggtgtg ggctatggtc aagcatttgg cacattgtcc 781 attataacgt actattcatc tttaattgct ctgactttgt actatatgat cgtatcttgt 841 caagcgattc tcccttggac atattgtcgc gacgaatggg aaaattgtgt agattcaatg 901 ccaaaagaag acacattgca atttcccaat gacacatcaa ataaattgac cagcagttcg 961 gagttgtact ttattgaaat tgtatcaaag gaaaaggatc aaatagatga cggcctggga 1021 tctcccgatt tgtatttaac gttgacgtta tttgcatcat ggatcgttat ttttctcgtt 1081 atacgtaatg gtgttaagag ttccggaaaa gctgcatact ttttggcgtt atttccctac 1141 gtagttctca ttgctttatt aatacgcgcg gtaaccttgg agggtgccgt ggatgggatt 1201 ttattctttt tggaacctga ctggggtcag ttggcaaact taaaggtttg gaaggaagct 1261 gttgtccagt gctttttttc tctggcagtt ggcattggcc cgataatcat gttttcgtcc 1321 tacaaccgat ttgatcatcc aatttacaga gatgccatga ttgttaccag cttagatacg 1381 ttgaccagta tgttggcggg tattacaatt ttcggaatat tgggcaatct ggcgcataat 1441 cttaaggtgt ccgatataaa ggaggtggtt caaagtggca ctgcattggc atttatatcg 1501 tatccagatg ctattgcgaa atttcaggct gttcctcaat ttttcgcagt tcttttcttc 1561 ttcatgctgt tcgttttggg agtgggctct attgtagctc tgcagagcac aattgtcacc 1621 attatatgtg atcagttcaa gtccacgaaa tattgggttg ttgctttgat ttgttcaata 1681 ggtggatttc tattgggttt ggtttatgtg accccaggtg gccagtggat tttaaatttg 1741 gttgactttt acggtggaac atacgtggta tttgccttgg cgattttgga aattgttgga 1801 attatttgga tttacggttt acaaaatttc tgtgatgatg ttgaatttat gacaaacaga 1861 aaagtgtcga tatattggcg tctatgttgg tcattcctaa cgcctgttat gatgatagtc 1921 atttttgtct actccatggt caccattgaa cctttaacat acaagaaaat tgaatatcca 1981 gaagcagcaa atattgctgg ttgggtaata tttgccattg gcattgctca gtttccttta 2041 tggggttggt ggtatattaa aacccattac aaggattcat tcatgaatac attgagaact 2101 tctttaagat cttctgagga gtggggacca aagaacccag aaacacgggc caaatggata 2161 gcttataaag aagctttagc tttggaacgg gggaaaaagt tgtcaagcaa taaatttgga 2221 ttctttaagc aaaaagttta caacatatca gtaggaaaaa attaaaaaaa agttaatcaa 2281 tcgacagtat taatatagca actaacaaat gtatgtatgt atgtatataa attaaatgtt 2341 acttaaatat ttgcatta