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LOCUS XM_013250529 5339 bp mRNA linear INV 02-SEP-2023 variant X9, mRNA. ACCESSION XM_013250529 VERSION XM_013250529.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250529.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5339 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5339 /gene="LOC106086025" /note="mucin-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106086025" CDS 542..4849 /gene="LOC106086025" /codon_start=1 /product="mucin-2" /protein_id="XP_013105983.2" /db_xref="GeneID:106086025" /translation="MSKSGFSTLNRWLGRKNKEKSMPNGSLSKSSTNLSISSTNINET SQLEYNRITPLPAATTNAPFEQTFRITVLLPKDQLYVARLGARVPLSKLLELVCDNKL LDSEKYEFRNPVDSSQVYSCDLTIGAVGLSEIRLCHKSESYDNFSTDEIMKLQRTSLI RESLTSSEFSSRNSKHTTKTTSPYSSSNSLNSMDSSGIHSTKAMRLSAGPQAKMAAPP RKKRAAPRPPSQAVIPEKSPLITENGNGGARESPAPSSPVNGNMEAKDFSVSTPDLSS HSDINGNDCNGHMQDIKETSQAEANGYSDDTVLYAQVQKKNALNLNSTSVENLTASSP TPSSLGGESSKFPEPSPRKRVVPAPKKKMVAPPAPQPRGSTYSDDSVSIGSANLSSEP STPVALTTPVQEFKAPSPQPAQRQQSREDMAAAPDVPKPQPRITTTTLLNATDLKADL KNLESHTAEKREESNNEEKQKVVSNVSKVMLNRTPTPEPRSLSCEPPDIDVCYETQLE NLKSPIEDDNVSKQADSGIGEPVPSPIPDSLPSEVSIHDVKSNFESSSDDDDMVKVYN FKLGKTLVKPLNETKTLEELTIMNDVQEETDSDLNTPNLTQVNSSNAPSETSSWNFAI PISPPPNFADNKFSEAFVEAEKQEQENPITPKIMERPILNFEVLKQEDQTKAKSKSVS TPSTVTPSTPLDSIVGELSAIIQEKGLDTLIKKSEESQEIEAAKPNTLTNFTINSVSR ATLTKPKEVQNEVVQAKQEVETSPPSPLDSPTNAPDEEKLYRKRNSVTGLKQRRSITR SDSFHTTAIATENTSSSGTLTKRTSSQISLDQMANGNLNRRRSSSELSIGESPSLQSL EVMKTILNARKNSLPHSGEEEEEEVNTRRPSEEIKFASLELKNKMALEKSPNPRQGEE EVEAKKLESKENIKKLWQNRANTEIEEYNKNVAKSFNEKESPKQQTRNETPTTEDNPK AFKKEEETDEITQLRRKEIPVEEKPKELPRVYRYSGPPSINFSTWSERPKVQVAIKNE GDYIFGGKSIENKAIENKTVPRSYRMSTPLNFNEPTTQESKVLPSVAPKPATIKRMGI PEKEFKVPVMVKPIKDVIVESTHEQKTKVTANGEEQNPKTPATPSETAKPMLQVAAKP QSPVLHKPPTPVKVISNGGQRLSLHRPTIESVLKPQTQTIVNTHTHNSTLPRTNKRFS TSLSTTSNTTSITNGAQTSATPITPGPQLLRSTSTKREERETKSMFIPNEAPSAPAPF GQNTLRRTGFKEKIMAKDEEEQQKAISTSSISLAKTPTTNATTPSKALTNGELKFTTA AKFEKKPTNTITATTTTTSAKLHLNLQKSTSITVTNSSSSSIITPPTPSLKPKPHTPK TAPILATASQPPPPPPPAMAYKLKPVTAVRTPTASEDPRDQLLAAIRNFKKDELKRA" ORIGIN 1 ggccagtatt acttgagaag tgcttaaggc taaaacactt ttaaaagcgg ccaaattttt 61 taactaaaga aaactaaacg acattaagtt tcgatttgaa tgcattgcta gattagccat 121 attccgcctt cccacccacc ctgcaacata gtgagactgt catgtgaata aatgtggtgt 181 aattaatcaa aatcattcat aattatcagc ctaattttcc taccgaaaac cttcaattgg 241 cattttagcc cagtctaaaa aaactgcaaa atttatttag ttgagttgaa catttgaaac 301 gaaaggctac agtggtttgt tagtattacg caaatcaaag caacaaggag ctgttacttc 361 aataaaaaaa acaaagataa agccatgagt tcaaggaatt aagcacaaac acagcaaccc 421 tgaagttaca agaaacctag gaattaagcc tttaaactac aacgaagtga aaccaaatcc 481 ataacatatt tttttctttt tgggagaaga cctttgaaaa ccactaaaaa cacacaacaa 541 aatgagcaaa tcgggattct ctacactcaa ccgatggttg gggcgtaaaa ataaagaaaa 601 atccatgcct aatggcagtt tatccaaatc tagcacaaat ctctccatat cttccacaaa 661 tatcaatgaa actagtcaac tggagtataa tcgcatcaca ccattgccag ctgccaccac 721 aaatgcccca tttgagcaga catttcgcat aactgttctg ctgcccaaag atcagctgta 781 cgtggcacgt ttgggtgccc gtgtgccgct gagtaaactt ttggagttgg tgtgcgataa 841 taaattattg gattctgaga aatatgaatt tagaaatcca gttgattcta gtcaagtcta 901 tagctgcgat ttaacaattg gcgctgttgg actctccgaa atacgtttat gtcacaaatc 961 cgagtcatac gataacttta gtaccgatga aatcatgaaa ctgcaacgca cttcacttat 1021 acgcgaatca ttgacatcat ccgagttcag cagtcgcaat tccaagcata caacgaaaac 1081 cactagtcct tatagttcta gcaatagtct gaattctatg gattcctcgg gtatacacag 1141 caccaaggca atgcgtttgt cggcaggacc ccaagcaaag atggcagctc cgccacgcaa 1201 aaagcgagca gctcccaggc ctccaagtca ggctgtcata cccgaaaaga gtcccctcat 1261 cacagagaat ggtaatggtg gagcgagaga aagtccagct cccagcagcc cggtaaacgg 1321 taacatggag gccaaagatt tttcggtatc cacccccgat ttatcatcgc acagtgatat 1381 taatggcaat gattgtaatg gtcatatgca ggatattaag gagacgtcgc aagccgaggc 1441 caatggttac tccgacgata cggtacttta tgcccaagta caaaagaaaa atgccttgaa 1501 tttgaacagc acaagtgtgg aaaatttgac tgcctcatca ccgacgccat catcgctggg 1561 gggagagagc agcaaatttc cggaaccttc accgcgcaaa cgggtagtac ctgcaccgaa 1621 aaagaaaatg gtggcccctc cagccccaca acccagggga tccacttata gtgatgatag 1681 cgtttccata ggttcggcca atttatcctc tgagccttcc actccggtgg ctttgactac 1741 cccagtgcaa gaatttaagg cgccttcgcc tcaacccgcc caaaggcaac agtcaagaga 1801 ggatatggct gcagcaccag atgtgccaaa accccagcca cgcataacca ccactacgct 1861 gctgaatgcc acagatttaa aggcagacct gaagaatttg gaaagtcaca ccgcagagaa 1921 gagggaggag agtaacaatg aggagaagca aaaagtggtt agcaatgtct ccaaagtcat 1981 gttgaatcgc actcccactc cagagcctcg ttcgctgtcc tgcgaacctc ccgacatcga 2041 tgtctgctat gaaacccaat tggaaaatct aaagtccccc atagaagatg acaatgtttc 2101 caagcaagca gattcgggca taggcgaacc tgtgccctcg cccatacccg atagtctgcc 2161 ctcagaggta tccatacatg atgtcaaatc gaatttcgag tcctcctcgg atgatgatga 2221 catggtcaag gtctacaatt tcaagttggg caagactctg gtgaagcccc tcaacgaaac 2281 caaaaccctg gaagagctga ccataatgaa cgatgtgcag gaggagactg acagtgattt 2341 aaatacaccc aacttgacac aggtcaattc atcgaatgcc ccctcagaga cctcttcatg 2401 gaattttgcc atacccatat cacctcctcc caattttgcg gataataaat tctccgaagc 2461 ctttgtggag gccgaaaaac aagagcaaga aaatcccatt acaccaaaga ttatggaaag 2521 acccatcttg aattttgaag tgctgaagca ggaggatcaa acaaaagcca aatcgaaaag 2581 tgtcagcacc ccatcaacgg ttacacccag tacacccttg gacagtatag tgggggaatt 2641 gtcagccatt atacaggaga agggtttgga caccttgatc aagaaatccg aggagagcca 2701 agaaattgag gcagccaaac ccaatacact gacaaatttc accattaact ctgtcagcag 2761 ggccactctt accaagccca aagaagttca gaatgaagtt gtccaagcca agcaggaagt 2821 ggagacttcc ccaccctcac ccttggattc acccactaat gctcccgacg aagagaaatt 2881 gtatcgcaaa cgcaacagtg tcacaggcct taagcaaagg cgttccatta cccgttccga 2941 ttccttccat accacagcca tagctacaga gaataccagt tcctctggaa ctctgaccaa 3001 aagaacctct tcgcaaatat ctttggatca aatggccaat ggcaatctta accgtcgacg 3061 ctcctccagt gaattgagca ttggagaatc accctctctg cagagtttgg aggtcatgaa 3121 aaccatactc aatgcccgca aaaatagtct accccacagt ggtgaagagg aggaggagga 3181 ggtgaatacg agaaggcctt cggaggagat caaatttgcc agcctggagc tgaaaaataa 3241 aatggccttg gagaaaagtc ccaatcccag gcaaggggaa gaggaggtgg aggcaaaaaa 3301 attggaatct aaagaaaaca tcaaaaaact ttggcaaaac agagccaata cagagataga 3361 ggaatacaac aaaaatgtgg ctaaaagctt taatgagaaa gaaagcccca aacagcagac 3421 aagaaatgaa accccaacaa cagaagataa tccaaaagct tttaagaagg aggaggaaac 3481 cgatgaaatc actcagctac gaaggaagga gattcctgtc gaagaaaaac caaaagaatt 3541 gcccagggta tatcgctatt ctggtccacc cagcataaat ttctccacct ggagtgaaag 3601 acccaaggtg caggtggcca tcaaaaatga gggcgactat atctttggag gcaagtccat 3661 tgaaaacaag gccattgaaa acaaaacagt gcctcgtagc tatcgcatgt ccaccccact 3721 caatttcaat gaaccaacca cacaagaatc caaagttttg ccttctgtgg ctcccaagcc 3781 ggcgacaata aaacgcatgg gtatacccga aaaggaattt aaggtaccag ttatggtgaa 3841 acccattaag gatgtcatcg ttgaaagtac tcatgaacag aaaaccaaag taaccgcaaa 3901 tggtgaagag cagaatccaa aaactcctgc aaccccaagt gaaactgcga aacccatgct 3961 ccaagtagct gcaaaacctc agagccctgt tctacacaag ccacccactc ctgttaaagt 4021 catatcaaat ggaggtcaaa gactatcgct gcatagaccc accattgaat cggtactcaa 4081 acctcaaact caaaccatag tcaatacaca tacccataac tctacactac cgcgtaccaa 4141 taaacgcttc tccacttccc tatccaccac ctccaacacc acaagcatca caaatggcgc 4201 acaaacttca gcaactccaa taacgccagg accacagctt ttacgctcta cctctacaaa 4261 gcgcgaggaa agggaaacca aatccatgtt cataccaaat gaggcccctt ctgcgccagc 4321 accatttggc caaaatactt tgagacgcac tggcttcaaa gagaaaatca tggccaaaga 4381 tgaggaggag caacaaaaag ccataagcac tagctctata tccttagcaa agacaccaac 4441 cacaaatgcc accacaccca gcaaagcttt aacaaatggt gaattgaaat tcaccacggc 4501 ggcgaagttt gaaaagaagc ctacaaacac aataacagca acaacaacaa caacgagtgc 4561 caaattacat ttaaatttgc aaaaatccac atcgattaca gtcaccaaca gcagcagcag 4621 cagcatcatc acacctccca caccttcgct taagccaaaa ccccatacac caaaaactgc 4681 cccgatactg gcgacagcat cccaaccgcc cccacctcca ccgcctgcaa tggcctacaa 4741 attaaaacct gtgactgcag tgcggacacc cacagcctca gaagatccca gagatcagtt 4801 actggcagct attcggaact tcaaaaagga tgaactaaag agagcgtaaa atattaacaa 4861 aaacaacttt cttaaaattc aacactctag tgaatattgg ttctaaacca agctttcttc 4921 tttacaataa tttatgattt aaaaatctgt tttagcaact taagtcacaa actaatttaa 4981 tttaatatat atttagctaa tagaaaatac ataggcgatt cttatttctt tgtaaagtgg 5041 aaaaacccaa gcaaaatttt caaaaaaaaa aaaacaacca tatgatatgt ttgatatata 5101 aataatatat tgtttatgta gtttttaagt ttattaaatt ctgttaatgt caactttaac 5161 cctctacaat aggtatctgg tctttattaa ttctatctat aatatatttt ttctatttaa 5221 agaaaacgat tttatgtgag tgtgctctcc aatgaaagtt tttaactttc attctggttg 5281 agttggccac attgttaata agtgtaaaat attattataa ttattattat ttttattgc