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LOCUS XM_013250366 3030 bp mRNA linear INV 02-SEP-2023 ACCESSION XM_013250366 VERSION XM_013250366.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250366.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3030 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3030 /gene="LOC106085900" /note="DNA ligase 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106085900" CDS 62..2839 /gene="LOC106085900" /codon_start=1 /product="DNA ligase 4" /protein_id="XP_013105820.2" /db_xref="GeneID:106085900" /translation="MEISETIKFRDICLILNRIAKTDNKDKKGRIVKQYYESFCKHRE RFREEQKMKPDEPETGRSSFYCILRCLIPNADMARSPYGLKIHTLGRVYIKVLQLGSE SKEAEILEARRFSGIHGDYADKVFRILKPRCSNESSKLTLKEVHDMLDTVANENILNT EKVLIHLFQVASAEEQMWFVRLLLKSMHLGIADQRIFAILHPQAKDVYQACSNLAKLC CCLADNKFGTTNGESGDGPAQLVAAIIPFEHIRPQLCEIFPGNITSLMASDVLYMETK MDGERFQLHYKDNVFKYISRNGVDYTESFGSSYEQENKLTSKLQHLLPIGMETIILDG EMMVWDGDEKKFREKTENTDVKHLKADRNWQPCFVVYDLLYWNGQSLLGIPYIQRMHK LRNLLREEEGVLQIMKSEKISNPEDFRRMFQVALDNRQEGVVLKKQNAIYRPGCRNGG GWFKVKADYIDGLTTEFDLLVIGGFYNRARTFVESFLLGVLKYASSESYEVYSVGKVS NVTQQRVVLNNTLKSHWHLLSEEQPPMWYHYRPKSAEGRPDVWIEPRNSVVLQIKATD LNPSGAFYLNLALHFPRIQAWRNDKSWTECLTLEEYNQLKQNARGGIKKIVKRQISLE DFIGDRVKRRKLTPAEKRKMGLQSYEKRFDPQSVDKISDLLKGFSVCILSAALSRGFT PEYLKTLVVQNGGTIVENPLPNKSSCIVVAGDLNYRVQTLSKAQKYDIVSMDWLIRSC RKQTIAIKPLDMVSTTQEVKEQFAICFDKYGDSFKDFVSSRELKRICDAMCMDEVPEL DDKDLHELEELIYPVKNLNFYRNTWSNFYTIEPDSARAQLHYQWHGGNVVDDRSLDSE SGVNNLSKISYVFINLQQFDKTDFLQWLRERFTSSLLSNLQIVNINWILESHKARMLL DIKEFTWHDFD" ORIGIN 1 acaatttcac aattgtctgt gggttggatt tttaattaag tgtccgtaaa actaaatcaa 61 tatggaaatt tcagagacta taaagtttcg ggatatttgt ctaatattaa atcgcattgc 121 taaaacggac aataaagata agaagggtag aattgttaaa caatactatg aatcgttttg 181 taaacatcgt gagagattta gggaggaaca aaaaatgaaa ccggatgagc ctgagactgg 241 acgcagtagc ttttattgca ttttgcgttg cctcatacca aatgctgata tggcgcgatc 301 accctatggc cttaaaatac acacacttgg aagagtctat ataaaagttt tgcaattggg 361 ttccgaatcc aaagaggctg aaatattgga agctcgtaga ttttccggca ttcatggcga 421 ttatgcagac aaagtttttc gtatacttaa gcctagatgt agcaatgaat caagtaaatt 481 gactctgaag gaagtgcatg atatgctaga tactgtagcc aatgagaata ttttaaatac 541 tgaaaaagtt ctaattcacc ttttccaagt ggcctcggca gaggaacaaa tgtggtttgt 601 acgtctacta ttgaaatcca tgcacttggg cattgcagat caacgtatat ttgctatttt 661 acatccccaa gcaaaggacg tttatcaagc ctgcagtaat cttgcaaagc tatgttgctg 721 tctggcagac aacaagtttg gcacaactaa tggagagtcg ggagatggac cagcgcagtt 781 ggtagctgcc ataataccct tcgaacatat acgaccacaa ttgtgtgaga ttttccccgg 841 gaacattaca tctctgatgg cttccgatgt tttgtatatg gaaactaaaa tggatggtga 901 acgctttcaa ttgcattata aggataatgt ctttaagtat atatcgcgta atggtgtaga 961 ttatacggaa agttttggct cctcgtatga acaagaaaat aaattgacca gcaaattaca 1021 acatctattg cccattggca tggaaaccat tattttggat ggcgaaatga tggtctggga 1081 tggggatgag aagaaatttc gtgaaaaaac tgagaatacc gatgtcaagc atttaaaagc 1141 cgaccgtaat tggcagccct gttttgtggt ctatgatctg ctgtattgga atggtcaaag 1201 tcttttgggt ataccctata tacagagaat gcataaattg cgaaatctat tgcgtgagga 1261 ggagggagtg ctgcaaataa tgaaaagtga aaagatttca aatccggagg attttagacg 1321 catgttccaa gtggctttgg acaatcgaca ggaaggtgtg gtcttgaaaa aacaaaatgc 1381 catatatcgg ccgggatgca ggaatggagg gggctggttt aaggtgaagg cggattacat 1441 tgatggcttg accacagagt ttgatcttct ggttattggt ggcttctata atagagcacg 1501 tacttttgtt gaatcatttc tcttgggtgt tctaaaatat gcctcctcag aaagttatga 1561 agtctattcg gtgggcaagg taagcaatgt cacccaacaa cgtgttgtct taaacaatac 1621 cttgaaaagc cactggcatt tactgtccga agaacaacct cccatgtggt atcactatcg 1681 accaaagagt gccgagggtc gtcctgatgt ttggattgag ccccgaaatt ctgtggtgct 1741 acaaatcaaa gccaccgatt taaatccctc gggagcattt tatttgaatt tggctttgca 1801 ttttcctcgc atacaagcat ggcgcaatga taaatcctgg actgaatgtc tcacactgga 1861 ggaatataat cagctaaaac aaaatgccag aggtggtatt aagaagattg tcaagaggca 1921 aattagttta gaggacttca taggggatcg tgtgaaacgt agaaaactaa cgccagctga 1981 aaagcgtaaa atgggtctgc agtcctatga gaagcgtttt gatccacaaa gtgtggataa 2041 aatctctgac ttacttaagg gctttagtgt gtgtattcta agtgctgcct tgagtcgggg 2101 ctttaccccc gaatatctaa aaactttagt ggtccaaaat ggtggcacca ttgtggaaaa 2161 tcctttgccc aataagtcca gttgtattgt ggtggcaggc gatctcaact atcgtgtaca 2221 aactctatcc aaggcccaga agtatgacat tgtcagcatg gactggttaa tacgttcctg 2281 tcgcaaacaa accattgcca tcaaacctct tgacatggtc tccaccaccc aagaggtgaa 2341 ggaacagttt gccatatgtt ttgataaata cggtgatagt tttaaggatt ttgtaagttc 2401 ccgcgaatta aagcgcatct gtgatgccat gtgtatggat gaagtacctg aattagatga 2461 taaggattta catgaactgg aggagctgat ttatcctgtc aaaaatctga atttctatcg 2521 caatacatgg tctaattttt ataccattga accagattct gctcgagccc aattgcatta 2581 tcaatggcat ggtggtaatg tggttgatga tcgtagtttg gatagcgaaa gcggagttaa 2641 taatttatca aaaatatcct atgtgtttat aaatctacaa cagtttgata aaactgactt 2701 cctgcaatgg ttaagggagc gtttcacctc atctctctta tccaatttac aaattgttaa 2761 cattaattgg attctagaat cgcacaaggc aagaatgttg ctggatatca aggagttcac 2821 atggcatgat tttgattaga tttagttttt tatacaattg taaaatattc tgttagataa 2881 gagtactggt gacttatttt tgtatttcct ttttggaaga tgtattttta atgtactcaa 2941 actccatttc tggttgtttg ggtaagatgt tttttaattt aaacaaaata ttaatatgtt 3001 cttaatatac agatataatt tttgctgcat