Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013250316 1992 bp mRNA linear INV 02-SEP-2023 ACCESSION XM_013250316 VERSION XM_013250316.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250316.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1992 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1992 /gene="LOC106085869" /note="caspase-8; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins" /db_xref="GeneID:106085869" CDS 175..1812 /gene="LOC106085869" /codon_start=1 /product="caspase-8" /protein_id="XP_013105770.1" /db_xref="GeneID:106085869" /translation="MGSYRRNIMERINDIDIDDLEYVERDLCFYELVSLGFLLYGREK TTSEYILQKLIVLQQNPPKGKGNFGLAGSSDILRKYATINNTTWRVNIVEALAIIRAK KVLRKLGFSWQELHDIYLPHIPEVNVYIHPLLKALYKISERLSIAQAGRMVIKINETY LRHESQNLRFYDYGHLEVFLLFWMTRDVIAIGNQNLQGADVLNLISYFKQNDLDSMKA VLVDTINHNSVHGNYRRATNNTSNTVADNVVQSAAGNAVGRQETEDKDSGAVMDSRDM SLSAEHMQPQPNGFPRTDHEDFDCTERYVIRKQQAGYVLIINQSKFYEETNPEFKNLL PKIPFKPYRAGTDVDRDNLKALFSSFGYTPLVRDNLTHEEMQHVIGQTVQKSLIRDSL IVCILTHGMEGVVYGCNSIPVSINTIKAIMAEDTLKGKPKLLIIQACQKNIAPLDTSV SNAENQLEKQPDAYADMLTAMSSIAGTEALRHTMTGSWFIESLCKLTAKWCTRKHMLD ILTNVIADVAKRHDKNEYMLPIMSTTLRKDFFLPPPT" misc_feature 1081..1800 /gene="LOC106085869" /note="Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide...; Region: CASc; cl00042" /db_xref="CDD:444667" misc_feature order(1201..1203,1372..1374,1483..1485,1606..1623, 1633..1638) /gene="LOC106085869" /note="substrate pocket [chemical binding]; other site" /db_xref="CDD:237997" misc_feature order(1369..1371,1489..1491) /gene="LOC106085869" /note="active site" /db_xref="CDD:237997" misc_feature order(1564..1566,1585..1587,1594..1596,1603..1605, 1672..1674,1696..1698,1714..1716,1750..1752,1765..1770, 1774..1776,1783..1788) /gene="LOC106085869" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:237997" polyA_site 1992 /gene="LOC106085869" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttacagttg gtggggacac caacttcgga agtacaacct ggcatataga gtcgtactct 61 gccatttcga ttaaagtcca aaaaaaaaaa aaaaaaaata tttttctgtc ggggattacc 121 ccacaagaaa taagcttttt agcacaattc gaggaaaagg gtggctacac aaagatgggc 181 tcgtacagaa ggaatataat ggaacgcatt aatgacatag atatagacga tttggaatat 241 gtggaaaggg atttgtgttt ttatgaattg gtttctttgg ggtttctact ttatggcaga 301 gagaaaacaa cttcggagta cattttacaa aaacttatag tgctgcagca aaatccaccc 361 aaaggtaagg gtaactttgg actcgcgggt agcagtgata ttctccgcaa atatgccacc 421 ataaataaca ccacatggcg tgtcaacatt gtggaggcgc tggcaattat aagagcaaaa 481 aaggttttgc gcaaactggg atttagttgg caagagcttc atgacattta tctgccacac 541 ataccggaag taaatgttta cattcatcct ttgttaaaag ctttatacaa aatctctgag 601 cggctctcaa tcgcccaagc gggcagaatg gttatcaaga tcaatgaaac gtatttgcgt 661 catgaatcac aaaacttgcg tttctatgat tatggtcatc tggaagtgtt tcttttgttc 721 tggatgacta gagatgtaat tgcaattggc aatcaaaatt tgcaaggtgc cgatgtgctt 781 aatttaatat catattttaa acaaaatgat ttggattcaa tgaaggcagt tttggtggat 841 accatcaacc ataattctgt gcatggaaac tatagaagag ccacaaacaa cacatcgaat 901 acagtggcag acaatgttgt gcaatctgcc gctggaaatg ctgttggtag acaggaaaca 961 gaagacaaag attcgggggc tgttatggat tcccgggata tgtcattgtc agcagaacac 1021 atgcaacccc aaccaaatgg ttttcccaga acagatcatg aagactttga ttgtactgaa 1081 cgctatgtta tacgcaagca acaggcgggt tatgttttga ttataaatca aagcaagttc 1141 tatgaagaaa caaatccaga gtttaagaat cttttaccca aaataccatt taagccatat 1201 cgtgctggaa ccgatgttga tagagataat ctgaaagcat tattttcttc atttggctat 1261 acgcccttag ttcgcgataa tctaacgcat gaagaaatgc agcatgttat aggacaaact 1321 gtgcaaaaat ctctcattag agattcctta attgtgtgca tattgacaca tggcatggag 1381 ggagtagttt atggttgtaa tagcataccg gttagtataa acaccataaa agcaataatg 1441 gcagaggata cattgaaggg aaaacctaaa ctattgataa tacaggcatg tcaaaagaac 1501 attgccccat tggatacgag tgtttcaaat gctgaaaacc aattggaaaa acaaccagat 1561 gcttatgcag atatgctaac agcaatgtct tcaatagcag gcacggaagc cttaagacat 1621 accatgactg gaagttggtt tatcgaatct ctgtgtaaac tcacagcaaa gtggtgtact 1681 cgcaaacaca tgctggatat attaaccaat gttattgcag atgtggcaaa gaggcatgac 1741 aaaaatgaat atatgcttcc cattatgagt accaccttgc ggaaagattt ctttttacca 1801 ccacccacat agtagtgcag tcagtgttca taagtcgcct tacttgtatt ttttattttt 1861 atttcgcaca attttaaaga gtacacattt gaaaacaagt tttgttttgg aaatgtaaga 1921 gaaaagttag aaatggaaaa tgaagtgaac ctttggccaa aatttcaagg gactttcctt 1981 attttctata aa