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PREDICTED: Stomoxys calcitrans splicing regulatory


LOCUS       XM_013250193            1804 bp    mRNA    linear   INV 02-SEP-2023
            glutamine/lysine-rich protein 1 (LOC106085778), transcript variant
            X1, mRNA.
ACCESSION   XM_013250193
VERSION     XM_013250193.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013250193.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1804
                     /gene="LOC106085778"
                     /note="splicing regulatory glutamine/lysine-rich protein
                     1; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:106085778"
     CDS             243..1496
                     /gene="LOC106085778"
                     /codon_start=1
                     /product="splicing regulatory glutamine/lysine-rich
                     protein 1"
                     /protein_id="XP_013105647.2"
                     /db_xref="GeneID:106085778"
                     /translation="MQNSWEKEVPNFVANCKARLQKILERLNWTEESVLKNFNTNSVA
                     SVSVVPKSSKISLSPRKATFPESLVTDNSIVLETPNLQNLLNNDSISAPENFNELQGN
                     FNREQKLQIYQHVIENTKKLDNSNVGEGPEGVDSLADIVAAKTRDAKRKKRKFRKSKP
                     TRIEEVRALVQLQMQALEQFIENQHEGQNTKDYEDKREINRGKHTIRDTNYIHSSNSH
                     GMKTEESTYNCKNNSKEQSYSSYRSSRDISEQNYNKNIHPKDTHYKKPEDRQHDYGKR
                     ERKHRSRSPAHDKYKEKPYKDHTKYRESNHYKRHKRDHRSRSPVHDKYQNTRSSKDHK
                     RYGSKAREYEKRLSNSRESRKHYDRYEKSTKEHKRRRSRSSHSSDYCPDSKRDRHYDR
                     RKSKSPGSSKSRGHEKYEKSSKEKI"
     polyA_site      1804
                     /gene="LOC106085778"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttgacacaag aataaggacc agagatggga aacgtcaaat tatattttgt gccttcaaat
       61 aacatccatt cacaggaatt atcaaattaa gtgaatgccc gcccttgaat gctttgatac
      121 aacagctgac atagatcata ctagtctagt tatgttttgt aggatttagt taagatttta
      181 aattgtggag gaaattggat gtctttttag cgttaggaaa tccgggaaat gtagatagta
      241 atatgcagaa ttcatgggaa aaagaagtgc cgaattttgt ggccaattgt aaggccagac
      301 tacaaaagat tctcgaaaga cttaactgga cagaagagag tgtccttaag aattttaaca
      361 caaattcggt ggcctctgtc tcagtagttc ctaaatcgag caagatatct ttgtctccga
      421 gaaaagctac attcccggaa agtctggtta cagataattc tattgttcta gaaactccaa
      481 atctacaaaa tctcttgaat aatgatagca tttcagctcc cgaaaacttt aatgaactac
      541 aaggcaattt caatagggaa caaaaattgc aaatatatca gcatgttata gagaatacca
      601 aaaaattgga caacagcaac gtaggcgaag ggcctgaagg tgttgattcc ttggcggata
      661 ttgttgctgc caagactcgt gatgccaaac gcaagaagcg caagtttcgc aaaagcaaac
      721 ctacacgcat agaagaagta agggctttag ttcaattgca aatgcaggca ttggaacagt
      781 ttattgagaa tcaacatgag ggacagaata ctaaagatta tgaggataag cgagaaataa
      841 acagagggaa acatacaatc agggatacaa attacattca tagttcaaat tctcatggaa
      901 tgaaaacgga agaaagtact tataactgca aaaacaactc aaaagagcaa agctacagct
      961 cctacagaag cagcagagat atatccgaac aaaattataa caaaaatata cacccgaagg
     1021 atactcatta taaaaagcct gaggacagac aacacgatta tggaaagcgt gaaaggaaac
     1081 atcgcagtcg tagtccagcg catgacaaat acaaagagaa accttataaa gatcatacca
     1141 aatacagaga aagcaaccac tataaaaggc ataaaaggga tcaccgcagt cgaagtcctg
     1201 tgcatgacaa atatcagaat accagatcct caaaggatca caaaagatat ggcagcaaag
     1261 caagggagta tgaaaaaagg ctcagcaata gccgagaatc tcgaaagcac tatgacagat
     1321 atgagaaatc aaccaaagaa cacaagagac ggcgaagcag aagttctcat tctagcgact
     1381 attgtcccga cagcaaacgt gatagacact atgaccgtcg caagagtaaa agtcctggtt
     1441 cgagtaaaag cagagggcat gaaaaatatg aaaaaagtag caaagaaaaa atatagcaaa
     1501 tactatattg gaaaatgttg aagactgaat tgcttaattg tgagttgaag actgaattgc
     1561 ttataccaac ctctgaacta atgaaaacat ttttatagat caagcttatc ttgggaattt
     1621 tgtatcaatt agtcatttaa attgttatcg ttcccataga tataagaatt tgcagacaaa
     1681 ttataaatgt agaaatgcaa atcatttcat tgtctatggt atacccaata atttgttcca
     1741 atttccaatc aaggcataag actgcaataa tcagaaaatc agtgtactgt aaatttttcg
     1801 aaaa