Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans flotillin-2 (LOC106085769),


LOCUS       XM_013250178            1818 bp    mRNA    linear   INV 02-SEP-2023
            transcript variant X3, mRNA.
ACCESSION   XM_013250178
VERSION     XM_013250178.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013250178.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1818
                     /gene="LOC106085769"
                     /note="flotillin-2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:106085769"
     CDS             432..1277
                     /gene="LOC106085769"
                     /codon_start=1
                     /product="flotillin-2 isoform X3"
                     /protein_id="XP_013105632.1"
                     /db_xref="GeneID:106085769"
                     /translation="MGIEILSFVIKDVYDDVQYLASLGKAQTAMVKRDADAGVAEANR
                     DAGIREAECEKGAMDVKYSTDTKIEDNARLFKLQKANFDQETNTAKAESQLAYELQAA
                     KIRQKIRNEEIQIDVVERRKQIEIESQEVQRKERELIGTVKLPAEAESHRVQTIAQGK
                     QCQTIEMARAEAEKIRKIGAAEAHAIELVGKAEAERMRMKAHVYKQYGDAAIMNIVLE
                     SLPKIAAEVAAPLAKTDEIVLIGGNDNLTNDVTRLVAQLPPSINALTGVDLSKVLSKI
                     PGAKA"
     misc_feature    <432..1274
                     /gene="LOC106085769"
                     /note="Uncharacterized membrane protein YqiK, contains
                     Band7/PHB/SPFH domain [Function unknown]; Region: YqiK;
                     COG2268"
                     /db_xref="CDD:441869"
ORIGIN      
        1 aatttcggaa aaaaaaacat ttttagcttt tgttaaaaaa aataaataaa ataaacaaac
       61 ggaaaaactt tgaaagcgaa tgaaaaacaa aaacacaaaa aaaaaatttc aaatcggtga
      121 aaataaaaat aaataaatag cggaaactta aaacaaatat ttaaacgaaa tcaaaaattc
      181 aatttcttct gttttaaaat aaaaaaaaac ccctatttaa gctcgtaaaa tttaatagct
      241 tcagttaaat aaaagaaaca aactctaact gaaaatgtca ttcgtatgga tgggtgcttt
      301 taaattaacc atgatattgg gtctcaccta tgctgtagta accaggaact cttacagtcg
      361 aagaggtcta caaagaccgc gatcaattcg ctgccctagt acgcgaggtg gccgcacctg
      421 atgttggtcg catgggcatc gaaattctct ccttcgtcat caaagatgtc tacgacgatg
      481 tgcaatatct ggcctcgctt ggcaaagccc aaacggccat ggttaaacgt gatgccgatg
      541 ccggtgtggc agaagccaat cgtgatgccg gtatacgtga ggccgaatgc gaaaagggtg
      601 ccatggatgt aaaatattcg accgatacaa aaatcgaaga caatgctcgt ctcttcaaat
      661 tgcaaaaggc caatttcgat caagagacca atacggccaa ggctgagtcg caactggcct
      721 atgaattgca ggccgccaaa attcgccaaa agataagaaa cgaagaaatt caaatcgatg
      781 tggtggagag acgtaaacaa atcgaaatcg aatcgcagga agtacaacgt aaagaacgtg
      841 aattgatagg cactgtgaaa ttgccagcag aggctgaatc tcatagggtg cagaccatag
      901 cacagggtaa acaatgtcag actattgaaa tggctcgtgc tgaggcggag aagatacgca
      961 aaatcggtgc tgccgaggcc catgccattg agctggtggg caaggccgaa gctgagcgca
     1021 tgcgcatgaa ggcccatgtt tataaacaat atggtgatgc tgccattatg aatattgtct
     1081 tggaatctct gcctaagatc gctgccgaag ttgctgctcc tttggccaaa accgatgaga
     1141 ttgttctcat tggtggcaat gataatctga ccaatgatgt tacccgcctg gtggcccaat
     1201 taccaccctc catcaatgct ttgaccggtg tcgatttgtc caaggtcctt tcgaagatac
     1261 ctggggccaa agcgtgagaa ttagcacata tttcccaaca ccatggattc gatgatctgg
     1321 ctatggcttg agcattgaat gaacgatatt agacgacccc cctctataca tataacccac
     1381 tcccgaacaa aacaaaagga atacttaaac acaatgacga tgatgacgac aacaaagatg
     1441 gcgaccttta ttaacatgat atttaacgac aaaatatggg aaattattaa aaaaaccaac
     1501 aacaagtgca tagtggaaat gaacttaata atgaacttaa atggaaaaca atcacctaaa
     1561 acattttttt acaaaatgaa atttataaca agaaaaacaa aaaaccggaa tataaataac
     1621 aaactaagac aaaaagaaac tgtactatta aagaacaatt taggaagaaa ccaagcattt
     1681 ataaacaaaa aaatccattt gtgtatgaaa ttattttgtt tttttagaaa atgtctcaaa
     1741 aattgtatag aacatttgta gaaaaaccaa tatggcttaa atacacaaca acaacactat
     1801 aaactgagca ttcacacc