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LOCUS XM_013250147 2435 bp mRNA linear INV 02-SEP-2023 mitochondrial (LOC106085744), mRNA. ACCESSION XM_013250147 VERSION XM_013250147.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250147.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2435 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2435 /gene="LOC106085744" /note="probable citrate synthase, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins" /db_xref="GeneID:106085744" CDS 126..1517 /gene="LOC106085744" /codon_start=1 /product="probable citrate synthase, mitochondrial" /protein_id="XP_013105601.1" /db_xref="GeneID:106085744" /translation="MISRISSRKLPEAQKVNAFLAQYARFFTADSSLRDVLATKIPQE QERVKNFRKQHGATKMGETTIDMMYGGMRGIKALVTETSVLDADEGIRFRGLSIPECQ KVLPAAEGGAEPLPEGLFWLLMTGDVPSKGQVKQLSREWADRAALPQHVVTMLNNFPT TLHPMSQFSAAITALNHDSKFAKAYSEGVHKSKYWEYVYEDSMDLIAKLPVVAATIYC NTYRNGKGSKSIDSNLDWSANFVKMLGYDNPEFTELMRLYLTIHSDHEGGNVSAHTVH LVGSALSDPYLSFAAGMNGLAGPLHGLANQEVLVWLRKLQKEAGNNPSEEQLKDYIWK TLKSGQVVPGYGHAVLRKTDPRYTCQREFALKHLPNDELFQLVSKIYKVVPPILTETG KVKNPWPNVDAHSGVLLQYYGMKEMNYYTVLFGVSRALGVLASLVWDRALGLPIERPK SLSTDLLMKMVKK" misc_feature 222..1505 /gene="LOC106085744" /note="Saccharomyces cerevisiae (Sc) citrate synthases Cit1-2_like. Citrate synthases (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) with oxaloacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the citric acid cycle (TCA or...; Region: ScCit1-2_like; cd06105" /db_xref="CDD:99858" misc_feature order(336..341,348..368,621..623,633..635,642..644, 918..920,933..935,942..947,954..959,966..974,984..986, 1005..1010,1017..1025,1167..1169,1458..1484) /gene="LOC106085744" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:99858" misc_feature order(342..344,918..920,930..932,1020..1031,1035..1037, 1044..1046,1146..1169,1176..1178,1191..1193,1314..1316, 1323..1325,1329..1331,1395..1397,1407..1409,1458..1460, 1467..1469) /gene="LOC106085744" /note="active site" /db_xref="CDD:99858" misc_feature order(342..344,1020..1028,1035..1037,1044..1046, 1146..1169,1176..1178,1314..1316,1323..1325,1329..1331, 1458..1460) /gene="LOC106085744" /note="coenzyme A binding site [chemical binding]; other site" /db_xref="CDD:99858" misc_feature order(342..344,918..920,930..932,1023..1028,1146..1151, 1155..1169,1191..1193,1323..1325,1407..1409) /gene="LOC106085744" /note="citrylCoA binding site [chemical binding]; other site" /db_xref="CDD:99858" misc_feature order(918..920,930..932,1026..1031,1164..1169,1191..1193, 1329..1331,1395..1397,1407..1409,1467..1469) /gene="LOC106085744" /note="oxalacetate/citrate binding site [chemical binding]; other site" /db_xref="CDD:99858" misc_feature order(1026..1028,1164..1166,1329..1331) /gene="LOC106085744" /note="catalytic triad [active]" /db_xref="CDD:99858" polyA_site 2435 /gene="LOC106085744" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ataagcatga taataaatga taagtcgata gtcgacgttt agatcccagt tcctcagtca 61 aatattgacc agcacttgaa tcacaacgtc ttgaacggtg taacggaaat tttttagcca 121 acacaatgat cagccgcatt tcatcgcgta aattgccaga agcccagaaa gtgaatgcct 181 tcttggctca atatgcccgt ttcttcactg ccgattcaag tttgcgtgat gttttagcta 241 ctaaaattcc acaggaacag gaacgtgtca agaacttcag gaaacaacat ggtgccacaa 301 aaatgggtga aaccaccatt gacatgatgt atggtggtat gcgtggtatt aaagccttgg 361 ttacagaaac ttctgttttg gatgccgacg aaggtatccg tttccgtgga ctttccattc 421 ccgaatgcca aaaagtattg cctgctgccg aaggtggtgc tgagccattg cccgaaggcc 481 ttttctggct tttgatgacc ggtgatgttc cctcaaaggg tcaggttaaa caattgtccc 541 gcgaatgggc cgatcgtgct gccttgcctc aacacgttgt caccatgttg aacaacttcc 601 ctaccacttt gcatcccatg tctcaattct cggctgccat tactgccttg aaccacgaca 661 gcaaatttgc caaggcttac tcagagggtg tgcacaaatc caagtattgg gaatacgtct 721 atgaagacag catggacttg attgctaaac taccagttgt cgctgccacc atctattgca 781 atacctatcg caatggcaaa ggttcaaaat ccattgactc caacttggat tggtctgcca 841 actttgtgaa aatgttgggc tacgacaatc cagaattcac cgaattgatg cgcttgtact 901 tgaccattca cagtgatcac gagggtggca atgtgtctgc ccacactgtg cacttggttg 961 gttccgcctt gagcgatccc tacctctcat tcgctgccgg tatgaacggt ttggctggtc 1021 ctttgcatgg tttggccaac caagaagtct tggtttggtt gcgcaaattg caaaaggaag 1081 ccggcaacaa cccctcggag gaacaactca aggactacat ctggaagacc cttaagtctg 1141 gtcaagtcgt tcctggctat ggtcacgctg tgctccgcaa gacagatccc cgctacacct 1201 gccaacgtga gttcgccctc aagcatctgc ccaacgatga actcttccag ttggtatcca 1261 agatctacaa ggtcgtccca ccaatcctca ccgaaaccgg caaggtcaag aacccctggc 1321 ccaatgtaga tgctcactcc ggtgtgttgt tgcaatacta cggcatgaag gaaatgaact 1381 actacaccgt tttgttcggc gtttcccgcg ctctcggcgt gttggcatcc ctcgtctggg 1441 atcgtgcttt gggcttgccc attgaacgcc ccaagtccct atccacagac ctgctcatga 1501 aaatggttaa gaagtaaatt ataacagata ccgtacagta ataaaaccaa aaactatttc 1561 taaacaacaa caaatgtatc aaatctacaa caacaacaaa acaaccacaa aagcataacg 1621 tttttaaatg atttagaaaa aatgataata agaagtaaat aattaagaat catttcgatt 1681 gtaatgataa aaattatgag aggattaaaa ctagcaaaag taaccaatac aacaacaaat 1741 catcatattt acctaacgaa ctaaagctta attaatttta atttaattta aatacaacaa 1801 aatacaaaat aaaaccattt aaacaaacca aaaatagcaa caacacctgc agaatcctca 1861 tttttttata aaaacaagga cacaattaag atgaaaacaa taaaatatat tgcgaacata 1921 tgaaatattt aaaagccaaa ttttaatggc ccagaagacg atgaaagaaa ggtgtgtgta 1981 tctttttgaa acatggttcc attgtctctt tcccatgttt tcgaagcctt cattcatgca 2041 cacacattaa aacaaactat tgattggata tgtaattttg gatgttacaa cggagagcca 2101 gggaggacta gacgacattc taaacaagtt gtatttacat ataccattct atatattcgc 2161 atttttaaga ccaaacgaat ggagatgaat cgaagttcaa ctgcatacct aagtctagat 2221 attaaagtaa tcatgaaatt aacaaatgaa tgtgtagaac aataataact tatgaaagtt 2281 acgttatttt gaatcaaaac aaaaacagtt tgtagtgttc atccatacat aacaatggaa 2341 atatttaata aatgactaaa gtaagagtta taaaaaaccg agttctggaa acaataaagt 2401 gcaagcagct tcattatcta cacatgtcga aaaca