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LOCUS XM_013250142 6155 bp mRNA linear INV 02-SEP-2023 2-binding protein 1 (LOC106085742), transcript variant X2, mRNA. ACCESSION XM_013250142 VERSION XM_013250142.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250142.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6155 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6155 /gene="LOC106085742" /note="interferon regulatory factor 2-binding protein 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106085742" CDS 1762..3222 /gene="LOC106085742" /codon_start=1 /product="interferon regulatory factor 2-binding protein 1 isoform X2" /protein_id="XP_013105596.1" /db_xref="GeneID:106085742" /translation="MSLQTKRQHCYLCDLPRMPWAMINDFSEAVCRGCVNYEGADRIE LVLDAARQMKRLHQASKRSHENGEVQSASVQPPTQGQHRVAGSGGGGPISVGVVGQQQ QQHHHAYPSQRIGPPQPTLMDFPVKMEAHDANVRPVRISHMAPHHMSMSSRAVAAAAA AAGSNLNPAQVGGPVPPALSVNLKRSPSEEDDHGHTDGGGPSGIKRPALDDPSTRPPL TRGDSLPAAVSFVSERNTGMREKHQPVRAPSFDASTFKPGETLPPGSPRNGPSPPGPP PPRTASRGSQHSPNSSAGSSSGRRSSGSRHVSSTTVTSSEAQGNPQQQSTAPPVGPGA SVNNPNGGVSSGPTNGPLASAAPGGPDGVNGPAGNNPAGQPTAGLTSTGAAPPGTTAP PPNTAQNTTLKCTLCQERLEDTHFVQCPSVNHHKFCFPCSRESIKRQNGLGNEVYCPS GDRCPLANSTIPWAFMQGEITTILGEEVKVKKERES" misc_feature 1777..1932 /gene="LOC106085742" /note="Interferon regulatory factor 2-binding protein zinc finger; Region: IRF-2BP1_2; pfam11261" /db_xref="CDD:463250" misc_feature 2965..3135 /gene="LOC106085742" /note="variant of RING finger, HC subclass, found in interferon regulatory factor 2-binding protein IRF-2BP1, IRF-2BP2, and similar proteins; Region: vRING-HC_IRF2BP1-like; cd16511" /db_xref="CDD:438174" polyA_site 6155 /gene="LOC106085742" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtattggtag gtggtggtgg tgctagctaa gaagtaggat gataataatg ttgataatga 61 tgatgatgac gatgacgact actaagagat ggttgtcaga gcagggtcgg atggccggtg 121 gagggaaggt atatttgtga atggtgtata cacacagagg cgagtgtaaa aattcatgag 181 tgattcacag tggtggtgtt tgcctctatt ccgttttatt cggttgcaga ctgtcagata 241 caaaggtaga gcgcgcgcgt tgaacgaacg tacggataac aatttaattg tgctcttttt 301 ttgattttct atacttgtac caatttatgt atatcgcgtc gtctacggca ttaaacacag 361 agctgaaagc tagcggcaat ggtggtcaca gtcaatattg agactgccaa gttagtaaac 421 cacactcaac aataaaattg aaacagaaca gatcgtcatt ctcaaaacgt taataaattc 481 gtaacttttc taaaaacgca tagtgaataa taatagcaaa taagagaaga acgagaaaag 541 gagaacaaca aattaaaaaa agagacgaaa gggaaaaaac ctccgattaa cttgtgcatt 601 tcggtacgag aaagaactgt tgtgaactgt gctgttcgat ctgaaacaaa aggggagtga 661 ttgtctgtgt gtgtgtgtgt agagaggaca acattgagat ttcgtgcgcc tattctagta 721 gtactcctct tcctgttctt tctcctcccc ccaagttaaa gttaatgttt gctacgcatt 781 ataatatcta aaaagctacg gacgtactat acatgtgcat atgtatgagg tacatgtgat 841 ggacaaagtc ctatgtatgt gtcgtcgtcg tcgtcgtaca cggatatagt gaattctctt 901 gtgtgttttg ttgttcattc ctctttgatt tcctccttgc ttgccaaata cacaaaaatc 961 aataaaggac aatagagagc aaaaggaaca aacgaacgga acgtagcgca cgactgttgg 1021 tcggtcggta tacaaaacaa cacatacacg tacaaacacg gctgcacggc aagacacggt 1081 cttataacgg acaacggcct catggattgt gttagtacgt ttgcgacgtt acgcgagtgc 1141 agttgtggtg atgtatgtgt tttcctcgac tcttgtcgtt gtggataatg cgcggatgaa 1201 cctagatggg attgtttaag cctaccataa aagtaaaccc caaattgcat ttgcggcaat 1261 cagtagcgag aagaacagca acataaaatt cagaattctt tttaaaaaga gtaccctaac 1321 aattagttta agttccccct caaaataagt gttctaaaca ccaattaagt aatccaagtg 1381 taaatgttcc aatcggaata aaatcaattt gctgcatcgc aagcaagcaa gcaaaaaaaa 1441 aaaaagaaaa acaggaagaa agaagaaaag tcctttgcgt gaaaatttat tgtatgtatt 1501 gtgtaaactt gtagactggt gtagctacct agttttcgaa aagagaacag gtcgtgtcgt 1561 ataccagcaa cggaacagag ctgcgctaaa acaacaacaa aaaacaaaac aaactcagtt 1621 tcaaccccgt tgtgcaagag aaaaaagaac caacacggaa tattgtccag aaaaaaaaac 1681 aggcaaaggg tgaccaagca ataccaagca acgagcccag tgaatatttc ctagtagggg 1741 tcgaccacag ctacaatcat catgtcccta caaacaaagc gccaacactg ctatttgtgt 1801 gatctgcccc gcatgccttg ggccatgatc aatgattttt cggaggcagt gtgtcgaggc 1861 tgtgtcaact atgagggagc cgatcgcatc gagttggtgc tggatgctgc cagacaaatg 1921 aagcgtctgc atcaggcctc caagcgcagt catgagaacg gtgaagtgca gtccgcctca 1981 gttcaaccac ccacgcaagg acaacaccgt gttgctggaa gtggcggcgg cggacctata 2041 agtgtgggag tggtgggcca gcagcagcag caacaccatc atgcctatcc ctcacaacgc 2101 atagggcctc cgcagcccac acttatggat ttccctgtga aaatggaggc ccatgacgcc 2161 aatgtcagac ccgtccgtat ttctcacatg gccccacatc acatgtccat gtccagcaga 2221 gcggtagcag ccgccgctgc agcagctggc tccaacctaa atcctgctca ggtgggaggt 2281 cctgtgccgc ctgccttgtc ggttaatttg aaaaggtcgc catccgaaga ggacgatcat 2341 ggccacacag acggcggtgg accatcgggc attaagagac ctgccttgga tgatccctca 2401 acacgccctc ccctaaccag aggcgattca ttgccggccg ccgtatcatt tgtatcggaa 2461 cgtaatacag gaatgcgcga aaagcatcaa cccgtcagag cgccctcatt tgatgcatct 2521 acatttaaac caggcgagac attgccacca ggaagcccac gcaatggacc cagtccaccc 2581 ggaccaccac cgccaaggac ggcatccaga ggcagtcaac attcgccgaa tagttcagct 2641 ggttcatctt caggacgtcg gtcttctggt tctcgtcatg tgtccagcac aacagttact 2701 agttcggaag cgcagggcaa tccacaacaa caaagcacag cgcctccagt gggccctgga 2761 gcttcggtca acaatcccaa tgggggtgtt agcagtggac ccactaatgg gcccttagca 2821 tcggcggcac ccggtggtcc agatggtgtg aatgggccag caggaaataa tccagcaggt 2881 cagcccacag ccggtctcac aagtacaggg gccgcaccac ccggtacaac agcgcctcct 2941 ccaaataccg ctcaaaacac caccctcaag tgtaccctct gccaggaacg acttgaagat 3001 actcactttg tgcaatgccc ctcagtgaat catcacaaat tctgctttcc ctgcagcaga 3061 gagagtatta aacgacagaa tggccttggc aacgaggttt attgtcccag tggcgatcgg 3121 tgtcccttgg caaactcaac aataccttgg gcttttatgc aaggcgaaat caccactatt 3181 ttgggagaag aggttaaggt caagaaggaa cgggagtctt aatgtccatt ttattgcaaa 3241 aagctgaggc gagctttgga aaaatactaa acaaaactcc aaactatttt ctcaaaaagg 3301 acgagtttgt tctctcaatg caaaatcgaa ccgagttcga aacaaatgaa aagaagaaac 3361 aattttttgg aaactacgac gcagcttttg ttttagcgtt tgtgtgattt gtattctgag 3421 gataaagagc tctcccaacc accaccaaca ccaccaccac caacaacaac aacatcatca 3481 accacaacaa ccacaacaac aacaatctta gttatttaaa tatttatttt ggaaatcatt 3541 tcgaaaactg aactcgacga ttttgtacgt gtgggtgtgc cctggaacac caatgtttca 3601 agatatcaac caacattgtc aggatatcaa ccaacagatg tcgttgcagg cattcaaaca 3661 acaacaaaaa acaattgtct ttggtcaact gctgctgcgt ttggaaggag gcaagcagtc 3721 catcagcaaa cacaccagtc gcccgccgct aacgctgccg ccaaacacag tggctgcgca 3781 taatcaatat tgtaaataat ggaataacta attaaacata tagaaaatat ttaatatatc 3841 cctagtaatc tatataataa tacaatatat attataaata tgaaaagcga ttaatgtagg 3901 tctaatttat gtatgtatgt atgtatgtta tgtatgtaat attctaaagt gtatttgttt 3961 tatcttttta tgtattctcg tacttgcata tctatttata tcggcgaatg tatgtgtgta 4021 tgtatgtgag tgagtgagca ttatatgaag gactctgcct cttctctatg ttgaagataa 4081 tggaaaaatg agtcaatact ttgtagacca ggaatccgat ttgaatcctg tgagattttt 4141 acttttcccc ttacccactt tttccccttt ttttttaagt tactgtgggt ttatataaat 4201 ttgtttgtgt gtgtgtgtgt gtgtatatgt gccagtatac ccgggtaaca cccacttata 4261 tacatgcaac tcagctctgc tccataagaa tatgttgtgc tggccaagat gtaggtcaaa 4321 gtcaatgtgc tccatgtatg ctaacgctgc aaaaatatga gtttgtaatt gccagttgat 4381 tcaatattct accatccact ctcggcccac aaaaaaggga gcaatgtttc aaggatcctt 4441 ggttatttat tttgttttct ttctttcctt tttactgttc ttatttcaaa tgctggcaca 4501 tacatgcacc cactatcaat ctagctacct aactaactac ttacttacat agatacatac 4561 atagattgtt ttacaaagta aaaaccccga tttaaataat attgacttta tgttgtacac 4621 acattttata tagccatgtg atcatagcca caaacatacc gcgaagagga tgaaactatg 4681 atctaaattt tgtaaattct ttttttgtag tcctgtagtg tagtagcgat aaacaaatag 4741 tgtagttgta gtaaacacat tcaccaggct cccatccccc aagcagccca gtccacttga 4801 atggtggagg cgtagccgga gccgggagac cagtgattgt agccctaaga aaaatctaaa 4861 catcagcaaa cgataattgc tgtatgcgat ggtcaacatt ttgcaaatga ccccatcata 4921 ataatacaca aaataaaatg agaaagaaca ttttcaacta taaaatagac gctaagtatt 4981 catttgaatt agcccaaaaa ccccaagcaa aggataaata acaaatggac aaaaaactcc 5041 actaaacaac aacaaacata agtccttgaa tacttgaaac ttgacaacat caacactcac 5101 acacagtacc aatttgttgg attctataag cgcactcgct atgatttggc gggcagtctc 5161 agattcaaaa ttacttggtt ttagtataga atttgcgact ccatatgata aggcagcagc 5221 agcagcatat atgaatattc tgaatgttgt ttgttttgaa tcttgctcct ataatgggta 5281 ctctaataca taaaatacct atagacatat agtatacttg aattgatcca acgccatact 5341 ccggctgaga ctctggcaga agcgatagct acggaacgat tgaacgatct tcaattgctc 5401 aaactaggca agaagacgac gaaatcagtc caaaggtcct cagctaagca gaacccataa 5461 ttgtggcata ataatctaag agatcaaaag gccatcaata ttgatagctt gcgggtgtct 5521 gcctaatttc aacaaaaaaa aaacaactaa aataaaacaa aattttttct tgtgatattc 5581 agcgtcagtt tatacaaaaa aaaccaaaaa aaaaaaaaca aaaatcaaac cttcaaatga 5641 aacagaccac aacaattgtt cagttcacca tcgctcgcct tgcgaggcaa aatgaattga 5701 aaaaatgtta cttttttact cgaataactc gaaaattata caaaaaaaaa attagctaat 5761 aacaaaaaat aactaaacaa ttggaaatca ttttgaaaca cccgttaggg aagaaaacaa 5821 gtattacgcc tgtaacccat cctgcaacat cattacaggt agcaaatgtc ccaagtgtgg 5881 gacaaaagga gctctctctg catagaaaca aaaaccataa caaacgcaac atagagaaca 5941 tttaaggact atacaacatt ttattagata cccaatatga acgacacaca caattacacg 6001 caagtgggcg ttcaatactg ggataacaaa caaaaaacta aaattttctc acaccaaaaa 6061 aaaaaaaaaa acaaagaaaa tgaaatttct aaaacaaaac aatcgaatgt taaataaagg 6121 ataattgata atttatcgat acatgccaaa atcaa