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LOCUS XM_013250140 10371 bp mRNA linear INV 02-SEP-2023 (LOC106085741), transcript variant X2, mRNA. ACCESSION XM_013250140 VERSION XM_013250140.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250140.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..10371 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..10371 /gene="LOC106085741" /note="uncharacterized protein CG3556; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106085741" CDS 535..2166 /gene="LOC106085741" /codon_start=1 /product="uncharacterized protein CG3556" /protein_id="XP_013105594.1" /db_xref="GeneID:106085741" /translation="MSQDNKRSSGGLLFLSLFIVSLQLIQNPKFVDATNSGTAATPVE VNLATSPTSNVSTVNAATTETPATAVVSMQAVQVDTAEMTTGEPTTSTPATTAPVHEI IGSAGPDKKEQEAIQKALDWLKEKRAADYGWGNDTHVVILSKELSGARDPSDPDDHVQ KIQELEDMLSVKEMEIEILAMLDRHHTLPKPLNLERLARYVLALGSLCKDPKHFHGHD LVATLQHHEPTQDIEFALTTLAACSSAAHVRKRQIRRLLDIASGVADQNVDTNAMVIL ALRCIVTDHRHRHLQHFVRRPARGLASLQDPRGSFGSLRSTALAMQALQDLENDPAGT WNRTAASRWILSRQGPQGGWTEEPLQDGQDPDIGVGLTADIVLALGWKGLGAVRALQC DHVIRENSDPTSENGEQKLAVPYGLTSSAEESDSRNVSYTYTLWVGSNVTQSFTLSLV SPKNTSFFKAMTQAAEMDPRFAFEAREWPNGHYVHTLAGMKEEPRGYNYWLLYRLPEL PDENNAPGNQLIAPVGVDELMVEDGEHYLYWYKKL" misc_feature <847..942 /gene="LOC106085741" /note="This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate...; Region: ISOPREN_C2_like; cl08267" /db_xref="CDD:415487" misc_feature <1120..>1542 /gene="LOC106085741" /note="Eukaryotic cobalamin-binding protein; Region: Cobalamin_bind; pfam01122" /db_xref="CDD:460073" ORIGIN 1 agtattgctt cgtaaacgtc aaaggcaaac cgaactgtga acgaagcagt gtggaaaaga 61 cgcaattaga aaatattgcc taatcgtata agaaaaggac atagaaccag ccacaactac 121 cacatcccaa aaaacgaaaa gaaattaaac caaaaattta acacaaagaa attgctggga 181 aaaaagtgaa aaaatctagc aaccaatagt caagccataa ggaaaaatac agtgttaagc 241 aataaagtga aaaaaggatt tgatttattt ttttattcga aaaagtatcc cagcagtgta 301 gtaaccttaa aagcggttgc aatttacagc tcagatttta tttcactgta ttccaatcaa 361 tggaataatg aggctaactc gacaagccta gaattgccca tcaagcaaca gtgagcaact 421 tctactcctt ggtaaatcct tttttgctga aagcggcaag gaaaacccgc aaaaagtccc 481 cagtttggat tatcccccaa aaattatcaa caaagccaag tgtaacacag caaaatgtct 541 caggataata aaagatcaag cggtggattg ctgtttctaa gtctctttat cgtaagccta 601 cagttaatac aaaatccgaa attcgtcgat gccacaaatt caggtactgc cgccacaccc 661 gtggaggtta acttagcaac gagtccaact tcgaatgttt ccacagtcaa cgcggccaca 721 actgaaacgc cggcaaccgc tgttgtctca atgcaagccg tacaagtcga tacggccgag 781 atgacaacag gcgagccaac cacatcaaca ccggcaacta cagcacctgt ccacgagatt 841 attggctcgg ctggaccaga taaaaaggaa caggaggcca tacaaaaagc cttggattgg 901 ttaaaagaga aacgagccgc cgactatggt tggggaaatg atacacatgt tgtcatactc 961 tccaaggaat tgtctggggc acgagatcct tcggatcccg atgatcatgt tcagaaaata 1021 caggagctgg aggacatgtt gtcggtgaag gaaatggaaa ttgagatatt ggctatgctc 1081 gatcgccatc atacgctgcc caaaccttta aatttggaga gattggcacg ttatgtgttg 1141 gctttgggtt cgctgtgtaa ggatcccaag cattttcatg gtcatgattt ggtggccact 1201 ctgcagcacc atgagcccac gcaagacatt gagtttgctt tgacaacact agcagcctgt 1261 agttcggcgg ctcatgtgcg caaaaggcaa atacgtaggc tgttggatat agccagtgga 1321 gtagcggatc aaaatgtgga tactaatgct atggttattt tggcattacg ctgcattgta 1381 actgaccaca ggcatcgcca cctgcaacat tttgtgcgaa gacctgcccg cggtcttgca 1441 agcctccaag atcctcgtgg cagtttcggt tcacttcgca gcaccgcctt ggccatgcag 1501 gctttgcaag atctggaaaa tgatcccgca ggaacatgga ataggacagc tgcttcacga 1561 tggattttga gcagacaagg ccctcaagga ggctggactg aggaacccct gcaggatggc 1621 caggatcccg atatcggtgt aggtctaact gccgatatcg ttttggcctt gggttggaag 1681 ggcttgggcg ctgtacgagc tcttcaatgt gatcacgtta tacgtgaaaa cagtgatccc 1741 acttcagaaa atggcgaaca aaaattagca gtgccctatg gactaacttc atcggcggag 1801 gagtcggatt ccagaaatgt ttcatacacg tacaccttgt gggtgggctc aaatgtaacg 1861 caatcgttta cattgtcgct ggtgtccccg aaaaacacaa gtttctttaa ggccatgaca 1921 caagcagcag aaatggatcc aagatttgca tttgaagctc gagaatggcc caatgggcac 1981 tatgtgcata ctttagccgg catgaaagag gagcccagag gctacaacta ttggcttctc 2041 tatcggttgc ccgaacttcc cgatgaaaat aatgcaccag gaaatcaact tatagctcca 2101 gtgggtgtcg atgaactgat ggttgaagat ggtgaacatt atttgtattg gtacaagaaa 2161 ctttaaatgg ccgcctacaa attagcataa catgaagctt ttcaaccagg attctccgtc 2221 gtcaacattt tcataccaaa aatttcaacc attataaact ctagactctc tccctttccc 2281 tctctatcac tctaataaga tttttgttaa atcacatcta aacggaagta aacgtcttca 2341 ggaccatctc gtcgtcgttg tcgttgtagt ccaagatgaa gaatatccta cattatctac 2401 tagtcataac catatgattt tcagtaaaag cgttatttga aattttgcaa attctacagc 2461 tgcgatacat aatacaaaca tacatacaca tcttaacaca cacacacact cgaacaaata 2521 acaaacaaaa gaacctgagg tgacatacgg aacattcaac aacgtttgca gtgtggttta 2581 aacgcttgca ttcctttaga tattggaact aaaaccctaa aaacaaaaat gaagaagaac 2641 aagaagaaaa acagcaacaa agtctcgttg actacttaac aaaaacagca ttggcatcgt 2701 aggacagaca tacatacata cctactgtga ggcacaccca cttaacgaat aaataatgga 2761 aaatcgctta aacataaacc aaaccaatga agaaaaacaa aacaaagtaa taataataaa 2821 tattattaat aaagagataa caataaatat taactaaata aaaaaaaaaa caaaaactaa 2881 aagagaacac aaactttaac aacattccat cgaatgcatc gaaataatgc caagggacta 2941 aaacaaaagg cttcaccaag gacagatacc ttctacttca caagaaccac tcacttatac 3001 catctattca cttacataca tacacacaca aaattctggg aaatataata actcctatga 3061 cagggtggaa aaaacgaaaa tggtccataa agagaatgaa agatttctat acaaaaataa 3121 tcctttgtta atactgatca aaaacataat tcacttttta gaagaacata ccaactcaat 3181 ctactcataa aagagtagaa caagttgata agtaccatac caaagcaatg atgtttggtt 3241 aggttgaaaa gagggtgcag atattaatcc gccccctgcc actatggaca tacacttaat 3301 aggcttgttg tgcgctctac aaactaaata agtaacctcg aaaaagaaat tttaaatcag 3361 gaattccgtg ctaattacaa aacccttaat tgttttccat accactcgcc taagttgttt 3421 catgtcttgg gcgagtggtc ttttcttagc ttaaaatggt cgtagaaaaa cataacaatt 3481 caacctactc agataggagt agtataaatt gctgtgtatc atttaaaagt caaaaaagca 3541 tataaaatat ttcgaattga aatcatttca aagcgctgta gcaagatatt ctcggagctt 3601 gaaatgttgc tagcaggacc tacaaactca tactactcaa attgaagtag catgagtatg 3661 aatcatttca aaaaatatag aaatacatga cttgagtgga atataccaac ccatactact 3721 caaaatggag tagtataaat ggatatgtac catttcaaag caatgctgaa tgatatattg 3781 atattataat ggccattact cattctactc agatatgaaa acagtcaaaa ccgcttaatt 3841 gaacaccttg taattgaaaa aaatcggtta attgcaaaaa atcacttgaa ctaattgatt 3901 ttaaagactt tttaacacat ttcactcatc ttaattgaaa aatggttaat tgaaaaaacg 3961 gttaattgaa aacccggtta attgaaaaac ccattaattg aaaaactggt taattgaaaa 4021 atcgcttaac tgaaatacaa atttatgcca aagaagtcac aattcacgat atcaaatccg 4081 cttagttaaa aacatttact gtaaaagcca caattttggt cacatctctt caatataggg 4141 cgtgagatgt tctatttgac ttcccagtat gtgtcatcaa aattggcaca ggtttcgata 4201 taactcccat ataatctttt atccaatatg tctatttaag gatgtggaaa tccaaatttg 4261 ttgttccatc gtacgaaaat catacaaggt tctatttgat atttcaatag gtatccaaat 4321 taaagtctga ctagatttcg agataagttc tacatataaa aagtactacg cacaccaggt 4381 ggggtattat atagtcggct ccgcccgact cttgcctttc cttactgctt tgtgatgagt 4441 atatagtttt tattctaaaa gcaacccaaa caagcgatct ggatggttca acggtaggaa 4501 ctagaaagca tcttccttct tctgttccta gtgtatcaca atggacgaaa acgtctaagt 4561 gagtctgatg gcagactgcc acttaaccta acctaaccca aacaaacaat ttggaacaca 4621 aactttatta tgatttaagg gctaatgagt gtataatttt tattctaaaa gcaacccaaa 4681 caagcgaact tgacgattca acggtaggaa ctaaatataa gacatcttcg ttcttctgtt 4741 cctgatgtat cacaatggac gaaaacgtct aagtgagtct ggtggcagac tgccacttaa 4801 cctaacccaa ataaacaatt tggaacacaa actctaatat gatttgaggg ctaataacat 4861 ttaaatgctt cattatataa agggtggtta aattttaaga gccgatgttg aaagtgaacc 4921 aaacctagcg gtcaagcttt tttctgcatt tcatttgaca tttctcaaat tcagactaac 4981 ccaattgtaa tgattgaaag atacacaatc gagcaacgcg ttagagttat tcaaaatcaa 5041 tagttaacca taactctgaa atttcgtcct ctaatttgag gttaatttca atacaaataa 5101 atcccgggga aaaaaacgtc aactcataaa gggactcagc gaaaatcgtc aagcgtcaaa 5161 gtgccaaatt ttggacaaaa aatcgacaaa ataacgtcta atcgtcatgt ccggcaacct 5221 agattctaag ctaaccaaag aactggggta attccccttc tatagatgcc gaagttttct 5281 attcaatatc tagtattccc taatattttc tctatttagc aaaaatttgt aggtgttcta 5341 ggagaagaag agcaacaatc tatcatatta actaatggaa aagttaatca cagatcaagc 5401 aaaaaagttg agttgggata ttttgtcagt tctctaaaga ttgcttacat tttgaaccac 5461 ttcactaagt cattgaccac ttcactaagt cattggagtt tggaatagta tttttcttca 5521 taagattttt gaagtatgta aatttactta ggtttttcga taattccaat ttgttggacc 5581 attttctcta cctttttttc atcctgttca tgcctctccc cctactttga catcacttta 5641 gatagcaaag atatattgga cgaatatatc tgtatatata caggatagac ttcatgactg 5701 aagaaatata ccacaaatag aacaaaaata ataatggacc gacatcccaa ggacggacga 5761 accgaagaga tactacacac aagaccgtca agacaccgtt cgtaacaata agtgattata 5821 aatcatacca ctaaaaaata agcataaata tttacatcca ttatattcat aatacatagt 5881 acatacatac atacatccat aaataatact acctacataa atactatcaa gcattcgtac 5941 gtaaatcata tttgtatgat tacgtacgta gtaacataca atgtagatat tttttgcgac 6001 taaatcaaat attattttga tatacgatta ctaataaata tatacaaacc aaccaaaaaa 6061 aaaaaacaaa aataacgata tgatgaatga agagatattt aagtaatata tgtaatgcat 6121 atgtatgccc tcctccaaca ctccacaact actactacta ctgcaaaaga aacacatata 6181 taattatact atcgatataa cgatcctata aaaacacttc ttaaatatac atactccctt 6241 agccagtctg tcagcaaaat aactgtactt aatagctcct atattatgct cctcttacca 6301 tcaaaggcaa aactcttttt ttcataccat tatcctgccc tatgatatct gttacacttt 6361 tgtttaggct agtgctccct cccaatcttt tctttatttc ccttgtgaag gcaaattttc 6421 gttacaattc tgaagatttt agttgcctat gagtcggaag tagggataag ctctcatcag 6481 atcagtgatc aagtgcactt tcgtatcgaa tttcatctcg aatttaatgg gtgttatgcc 6541 acttgtatat ctaatggcag ccggttgtac gtaccggaat gccccgatgg agttcttcat 6601 cacacggcta caacaacaac ccactgtaac attgaatttg ttataaacta gcatccattt 6661 aaacattcgc gttcttacat ttcataactt cacgttcaat aaagaaatac ataattcaga 6721 atacagagat ttcgaacgat tgtactcgtt cacggttgaa gtaattcggg cccaggatag 6781 tataattggc aattcataaa agtataagtt ttaaaaaaat atcacttact tgtttgacta 6841 tattcctgtg atgatagaca ctctcaagta gtgaagattt cttcgcatat tttcacatat 6901 aattacaagt caagttactc cttcatcctt tgacattctt ccaaaaactt ttcagcgtcc 6961 ttaaattgtc agcttttacc tacaagaaga tttaaaattg aaatagttat taaaaatgtg 7021 aacttcaact actaaaatga caaacattgt aacgaaaaga tgccttatca gtgggtttga 7081 tcttatattt ccactttctt taaacctttt ccatatatgc cttatgtacg accatattta 7141 ttaagctgaa atgcaaatgt tctccccaca ggagtctaaa tattgttcac ttttcgtaga 7201 attaggtctt atgttaagga catcaaatat attttggcaa tcaaagtcac caagttctcc 7261 taattagtaa aataggtctt aattggtgag tgttgcaaaa aatctcagaa atatcacatt 7321 tgagaactgt ggagactctt ttcttgtatc actgattagt gtcctattaa aatgttatct 7381 caatgataag gtacctgcga tgacagtttt taatactcat aaatgacgct agcatttcat 7441 gagggaatga ccaatagttc tttttgtagt ctatgcgttc aagatcagtt gtttttggct 7501 ggcatttacc acagcggtaa ctaccaaact aatggttgtc caacttattt attagttgac 7561 aacaactaca aaaccaatgg ttgtccattg agaacccagg gactgagatc tgttttagac 7621 tgcctgacca taatacggtc ctgcaggcgg agatccgggc gatcacggaa tgcgtgaagt 7681 ggtgtggtgc taacgcgagg acgtcgattg tgaacatctt taccgacatt aaaattgcca 7741 taagggcaat aacaaccagg acggtaagat cacgaacagt attgcagttt aagaaggaga 7801 ttaacgcctt ctctgaggtt ggcaaaatcc gcatcatttg ggtgccgggc cataacggag 7861 taaggggaaa tgaaagggca gacgatttgg cggtgaaggc cagaggactg ccgtcaataa 7921 acttggttat cccgaagcct ttcgggtcga cgcagtcgga gttaagggag tgggcgacga 7981 atgcgcatgc aacattgtgg aacagcgaaa cggccggtaa gacggcgaaa atcctatggg 8041 ggggatccag atcgtgagaa gacgaggtta ttactgaaag gaagcaagaa ggaggtcagt 8101 atagctattg gtatcataac gggacacata ggactagggg ctcacttatg taaaatcggt 8161 acggcaagtg atagcatgtg tagggcatgc ggggaagatg atgagacgct ggagcatttc 8221 cttaacctaa cctaaccgga ctccatttta tgggattcca tctcttcatc tttttgcctg 8281 gtagaaggat cggagacccc gaagaaattt tagcctttat tgctattgta ggccatcgta 8341 gcgcagaagt tatcatggct atcaacctat gacgctaaag gcatgggctc gaattctggc 8401 aagaaccccc tcctaatgct ggcgacattt gtgaggcacc gtacatgcaa aaaaataatt 8461 cgtttagcat aaaggaaaat ttctccaagt aaacttcttt tctgaaaaac gttgcacttt 8521 gtttatgata aaattacttg tttcttgcga tgaactcttg ccagaatttg tgacaaatat 8581 aatgtttgct tactcaagca atacctttca tccttgatat atgttattcg gggtttcatt 8641 tatgtgttgc tttaatggtt tttgtcattg gacataccag aatttttgga cttttagtca 8701 atatttgatt ttcataaaat aagttgataa gattttcatc aataattttg tcacaattca 8761 agtcaatata gaacgtttga cgttgacgct gaacgcctgg gtttgaatcc tggcgagaaa 8821 ataagaacat ttttgagcgc tggagaggat actctcctaa tgttttcgac atcttcgatg 8881 ctgtattcgt tatcctataa ataaaacaaa aatcacatat aggagttgtt gttttcgcac 8941 atttaaatac cttctttggg atggatattt ctttatcgcg taaatgttac caaacaacca 9001 atgtatgtgc ctcagaaatt cttgttgttt tttttttgtg cctgtaaacc aacgtggcac 9061 aaaagttagc aggtccgcct aaaacgacag acgtctgggt tcaaatccct gcgtgaacat 9121 taaaaaaatg ttcagcggtg gttatcccct tactaatacc ggctacatta gtgaggtatc 9181 ctgcaatgtt aaaacttctt ttccaagtgg tgtcgcgcct atgtaaaaat cttctcccca 9241 aaggggtgtc gcattgcggc actccgttcg aactcggcta aaaaaagaag gtcccttatc 9301 attgagttta aacttaaatc ggacagcatt cattgatatg tgagaagttt tcccctgttc 9361 cttaatagaa tgttcatggg caaattttca caaagcatgt acctatcttg ggaactcagt 9421 ataaaaatta tagccgtatt tgataagtat aacgcccaag aaatcaaatc ggttactggc 9481 attttgggaa tatacttttt aattagagtt taattaaaaa ttgaggtggc ttaggcaatg 9541 gcttcactta ccagtgcggt gatcatgaat aggttcccac caaaagcttt gttctatcgc 9601 taccgaggta aaaatgaaca aaagaaggtc caatggatag caaatggtct tagtgtgtct 9661 gcaactgact ttcgctatta tataacctaa tccattttca ttcttttgaa agtgactctg 9721 ctttcgacag acagaaggat gaacggacat cactaatata atatggtaat caagaatgag 9781 gaatactaaa ctgtctttgc atgagtttca tcaacgaaat gaagtagctt aaaggaatgg 9841 ccactctgtg tcaactgaac gaagtcacac gaagaaaact tcgcgtggct tcaagattca 9901 aggtttagta ttttcaactg ttttggtgca catgcctata atctaagacc taatggcatt 9961 tagtaacaat tatatcttga acagtgattt cctgttgccc atttggtctt tccagatctt 10021 gaatagagca ttatcaaact gctcagcctc tataatttct ctttatgcag gtttgctttt 10081 taaatatttt tctgcataaa ggcattcaat aatacctaca tacatacatg catatatttt 10141 gaaggcaaca aaccccaaac tagaacaaaa atactctcaa ctattattat tatgaagatt 10201 attattatta ttattaaaat atactaaaac caaaaaagaa ataacaagtc caaaccaaaa 10261 acctaaaata ataatgctat aatgatgtcc ctattcattt gaatatgttt attgaagaca 10321 aataccagac aaaacatccc aaaaacccaa aaacagccca aacctaaacc c