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LOCUS XM_013250120 1470 bp mRNA linear INV 02-SEP-2023 (LOC106085732), mRNA. ACCESSION XM_013250120 VERSION XM_013250120.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250120.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1470 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1470 /gene="LOC106085732" /note="chromobox protein homolog 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins" /db_xref="GeneID:106085732" CDS 304..846 /gene="LOC106085732" /codon_start=1 /product="chromobox protein homolog 1" /protein_id="XP_013105574.1" /db_xref="GeneID:106085732" /translation="MADAAIENEPDAGEFSVERIEDKRVINGKTEYYLKWKGYPRSEN TWEPEENLDCPDLIAAYEESIKPKKPEAKKRTSSATGSETKTKRKIAEEDKDNRKTVG FDRGLEPSKILGATDSSGELMFLMKWKGSDEADLVPAKQANVRCPQVVIQFYEERLTW HTPSADEDKSSASKENAAAD" misc_feature 343..492 /gene="LOC106085732" /note="chromodomain of heterochromatin protein 1 proteins, including HP1alpha, HP1beta, and HP1gamma; Region: CD_HP1_like; cd18631" /db_xref="CDD:349281" misc_feature order(343..354,403..405,409..414,418..420,430..432, 436..438,442..447,454..474) /gene="LOC106085732" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:349281" misc_feature 622..777 /gene="LOC106085732" /note="chromo shadow domain; Region: CSD; cd00034" /db_xref="CDD:349275" misc_feature order(634..636,640..654,676..678,703..705,763..765, 772..777) /gene="LOC106085732" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:349275" misc_feature order(646..648,760..768,772..777) /gene="LOC106085732" /note="putative binding pit [polypeptide binding]; other site" /db_xref="CDD:349275" misc_feature order(652..654,667..669,718..723,742..747,751..756, 763..768,772..777) /gene="LOC106085732" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:349275" polyA_site 1470 /gene="LOC106085732" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttaaaccag tggcaacctt gataaaacaa attagacgct gggaactata aaaaataatt 61 ttcaatattg ccagtttttt attagttaaa ttaaagcaca attgatttaa atgtatttgc 121 gagattcagt atatcacggg taatcagttt tgttcggaac agaaaagaat agtgagtaac 181 agtaattaag cttcaagcac gctgtaaaaa tcaagtcctc attcaaaact acacacaata 241 agatcagcca gaagcggcgg gtaaatatag cgtgagcgag atagcgacaa cgacgtagac 301 gacatggccg atgctgcgat cgaaaatgag ccagacgccg gggagttctc cgtggagcgc 361 attgaggaca agcgtgttat taatggcaag actgagtact atcttaagtg gaaaggttat 421 ccgcgtagtg aaaacacatg ggagccagaa gagaatctcg actgtcctga cttgattgct 481 gcttacgaag aatcgatcaa accgaaaaaa cccgaggcaa agaaacgcac atcaagtgca 541 acgggcagcg agaccaagac taagcgaaaa atcgctgaag aggacaagga caacagaaag 601 acggttggat ttgaccgtgg tcttgaaccc tccaaaatac tgggcgccac cgattcttcg 661 ggtgaactta tgttccttat gaaatggaag ggcagcgacg aggccgattt ggtgccagcc 721 aaacaggcca atgttcgctg tccacaggtt gttatacaat tctacgagga gcgactaacc 781 tggcatactc ccagtgccga tgaggacaaa agttctgcca gcaaggaaaa tgcagctgca 841 gattagaata agcgaagcaa aacaggaggc caccaccatc cacacatata ttagttttta 901 agcatcgtat taagtgcata aatatttgca ataccaacaa acgacaacaa gccaaccaac 961 cacacatgaa gttctcttgg aaaatccaaa ttcaaaacgg cacctaaccc aaaaggaaaa 1021 cttgaaaact tggtttaatt gccttcattt tccccacgtt caatagatat caatgaattt 1081 ttttttttat tttattctaa tgacaaaaga agttacgctt taaagccatt cttattttct 1141 acttaaaaac aaacaaacgc aaacaaacag atatgtatat ggtaaataag cattcgtctc 1201 ctatcgaaga cgtaaatttc tagtgtccac taatggactg atttagtttg taatattttg 1261 cgcgaagcaa tgtacatttt gtcaactttt tttttcttca ttcgtttaaa aacaaggaaa 1321 ctgacatgag ctgtaaacac ttaattacgc agagaacatg tcactcaatt tgaatcacac 1381 tcaaaaggaa ctctaattga tagacgattt caataagatt gttcttagca attcataatt 1441 ataaataaaa caaaaacaaa aaaaacggaa