Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013250111 6305 bp mRNA linear INV 02-SEP-2023 (LOC106085723), transcript variant X2, mRNA. ACCESSION XM_013250111 VERSION XM_013250111.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250111.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6305 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6305 /gene="LOC106085723" /note="protein strawberry notch; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106085723" CDS 452..4930 /gene="LOC106085723" /codon_start=1 /product="protein strawberry notch isoform X1" /protein_id="XP_013105565.2" /db_xref="GeneID:106085723" /translation="MTSTKRSFDFDDAIDEDSGSDFDEDEDPDKIEVPGGGRDLQTAV TYAKNSTIKKQGHLNNNSLLISNQTGGATSAFNRNHTMPKKIQSSPSVGMPTSSSNAG GNPESAGGMPSFNTSQLMGMAALAAAMFNATSETKSPTNSGNMNLNIGAIGGMGSMSG GLQASTSATAASRQNSTATSISYQANSGLNKAASLLAQMTMGLGNFEPAPAPVASTAN NTGLSSQSKMNAIVLQKIQALVAANPQFLTSGIPNQLLQQLLMQPMKTIQKQVTNTPT TVVQHEEDEADYEEMGVAETYAEYWPAKLKLGKKHPDPVVETASLSSVEPCDVYYKLS IPLDTIQSGQLSALQLESITYASQAHDHLLPDGSRAGFLIGDGAGVGKGRTIAGIIYE NYMKGRKKALWISVSNDLKYDAERDLNDIGAAKIEVYALNKFKYAKINSEVNNNVKKG VIFSTYSALIGESNNKTGKYKSRLKQLLQWCGEDFDGLIIFDECHKAKNLCPVGSGKP TKTGQTVLELQNKLPRARVVYASATGASEPKNMAYMVRLGLWGQGTAFPTFNDFIAAV EKRGVGAMEIVAMDMKLRGMYIARQLSFHGVTFKIEEVTLSKDFRRIYDESVQLWVEA MHKFIEAADLIDAESRMKKTMWGQFWSSHQRFFKYLCIAAKVNHVVHIAREAIKYGKC VVIGLQSTGEARTLEQLEREDGELTDFVSTAKGVFQSLVEKHFPAPDRNRINRILGLS EPENHKSTIQSIIAEVKAANRYKDDPSSSSTNNSSNKRKSSRSEMRNNKKSRNDSWND SDDDDKDSDNESNNDSDFKNSESEESDAGNRSDSYESSDFNPFGASGSDSDTDPWLAR AKKKKKKKTKTKDASSATAATSLGQGSMNNNNNSSNFLTLSNVSPPKKKAPVSTQDKI QDLLQKKQELKGTVTPIGVHGVKMNYGPPPKDAIERACSMKEELLRKIELLGERLPPN TLDQLIDELGGPDNVAEMTGRKGRVVQSDDGSIQYESRSEQDVPLETLNITEKQRFMD GTKDVAIISEAASSGISLQSDRRVRNQRRRVHITLELPWSADRAIQQFGRTHRSNQVN APEYIFLISDLAGERRFASTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGRTAL ETVMKAIMGYEQPLVPPPTDYHGEFFKDIANALLGVGIIVNSETTPGLLSLDKDYNNI SKFLNRILGMPVDLQNRLFKYFTDTLAAIINQARKGGRFDLGILDLGAAGENVTRVKL VRFIRKHATGKAPAELHTVRVERGMIWQEAIEKYADLISENEGFYLSHQVRNNKRTAI LAVELENQPQNALQSGKKKDGKPSKKEIMFQIYRPNTGLQVRHESLAEIEKKYKKVTM SDAEKHWTEQYDASVNTCSHAYWNGNCRNVSVGAECEVGLRQRLYSVLAGSVLSVWSR VEQILAMRNANNKMQVIRMKTTEGEKIVGTLIPKSCHDLLVQDLKSDAERVEEVNF" polyA_site 6305 /gene="LOC106085723" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttaacatcg gtgcagagta agaaccacga atttaatttg ttaattaatt tgtcaatgat 61 ctggcaagaa acgacaacaa atcatctgca gaaaacataa aacgtaaaca taacgtgcgg 121 cgggttcaca cacaagaaaa acaaaccgca agaaaatatt aagatcttac gctaaagtcg 181 taataaaagt atcggaaatg gtgttgtgtg gcaaataagc agaaaaataa gataataaat 241 aaataccaat cgtgtaaaag catagatata tagcaatctt tgcttcaaaa aaacccaaaa 301 aattccaact tcctgaaaga gttataaaaa cacaatagtc atcatatcag ttgttggtcg 361 gttagttcgg ggcgaaaaaa aaaaaagaat aacgaaaaga agcaaccaag atataatcgt 421 tatcttcagt gtttcaaaga taaccaacaa aatgacttca actaaacgtt cattcgattt 481 tgatgatgcc atcgatgagg attctggatc tgattttgat gaagatgaag atccagataa 541 aatagaagtt ccaggtggcg gaagagattt acaaaccgct gttacatacg ccaagaacag 601 tacaattaaa aaacaaggcc acctcaataa taattcccta ttaatttcaa atcaaacggg 661 aggagcaaca tctgcattta atagaaacca cactatgccg aaaaagatac aaagttcacc 721 ctcggtcggt atgcccacaa gtagttcaaa tgctggcgga aatcccgaat cggcaggtgg 781 tatgccatca tttaatacct cacaattaat gggcatggct gctttagctg cagccatgtt 841 caatgcaacc agtgaaacca aatcccctac aaattctgga aacatgaact taaatatagg 901 agctattggt ggtatgggaa gcatgagtgg aggccttcaa gcttcaacat cagccactgc 961 tgcttcaaga caaaactcta cagcaacctc tattagttat caggcaaatt ctggtcttaa 1021 taaagccgcc tctttgttgg cgcagatgac catgggtttg ggtaactttg aaccggcacc 1081 tgcccctgtc gcctcaacag caaacaatac cggcctttca tcacaatcca aaatgaatgc 1141 catagttttg caaaagattc aagctttagt cgcggcaaat ccacaattcc taacaagtgg 1201 tataccaaat caattattgc aacagttgct aatgcagccc atgaagacta ttcaaaagca 1261 ggttaccaat accccaacaa ctgtagtaca acacgaagaa gatgaggcgg attatgagga 1321 aatgggggtg gcagaaacct atgcggaata ttggccagca aagttaaaac tgggcaagaa 1381 acatcctgat cccgtggtgg agactgcctc cctgtcttcg gtagaaccct gtgatgttta 1441 ctacaaactt tccatacctc tcgataccat acaaagtggc caattaagtg ctttgcaatt 1501 ggaatccata acctatgctt ctcaggcgca tgatcatctt ttacccgatg gcagtcgtgc 1561 tggttttctc attggtgatg gtgctggtgt gggcaaaggt cgtacaattg ctggtattat 1621 ctatgaaaac tatatgaagg ggcgtaaaaa ggctttatgg atatcagtat cgaatgattt 1681 gaaatatgat gccgaaaggg atttaaatga tattggagcg gctaaaattg aggtgtatgc 1741 tttgaataag tttaaatatg ccaaaatcaa ttccgaggtt aacaacaatg taaagaaagg 1801 tgtcatcttt agcacctact ccgcattaat cggtgaatcg aataacaaga ctggtaaata 1861 taaatcaaga cttaaacaat tacttcaatg gtgcggcgag gatttcgatg gcctgataat 1921 tttcgatgag tgtcacaagg ccaaaaattt gtgtcccgtg ggttcaggaa agcctacaaa 1981 aaccggtcaa accgtattgg aattgcagaa taaattaccc agagctcgtg tagtatatgc 2041 ttcggcaact ggtgcttcag aacccaaaaa catggcgtat atggtgcgtt taggtttatg 2101 gggtcagggt acggcttttc ccacatttaa tgatttcata gcggctgttg agaaaagagg 2161 tgttggagcc atggaaattg tggccatgga catgaaattg cgaggcatgt atatagctcg 2221 ccagctaagt tttcatggag taactttcaa aatcgaagaa gtaactttgt ccaaagattt 2281 tcgccgcatc tatgatgagt cggtacaatt gtgggtagaa gccatgcaca aattcattga 2341 ggctgctgat ctaatcgatg ccgagagtcg catgaaaaaa accatgtggg gtcaattttg 2401 gtcgtcacat caacgttttt tcaaatattt gtgtatagct gccaaagtta atcatgtcgt 2461 gcacatagct cgagaagcca ttaaatatgg caaatgtgta gtcataggtc tacaatcgac 2521 gggtgaagca cgtactctgg aacaactgga acgagaagat ggagaactta cagattttgt 2581 atcaacagca aagggcgttt ttcaatctct agtcgaaaag cattttccag ctcccgatcg 2641 caaccgcatt aatcgcatat taggtctctc tgaaccagag aatcacaaat ccaccataca 2701 atcaattatt gccgaagtta aggcagccaa tagatataaa gatgatccct cctcttcgtc 2761 caccaataac agtagcaaca aacgaaaatc ttcacgttct gagatgcgca acaataagaa 2821 atcgcgcaat gattcttgga atgattccga tgatgatgat aaggattccg ataatgaatc 2881 caataatgat tcagatttta aaaattccga atcagaagaa tcggatgccg gcaatcgtag 2941 tgacagctac gaatcatccg attttaatcc atttggggca agtggctcag actcagatac 3001 tgatccttgg ttggcccgtg ccaaaaagaa gaagaaaaag aagacgaaaa ccaaggacgc 3061 atcctccgca acagcagcta catcattggg acaaggctcc atgaataaca acaacaatag 3121 cagtaatttc ttaacgctga gtaatgtttc accaccgaaa aagaaggctc ccgtctctac 3181 acaagacaaa attcaagatt tactacagaa gaaacaagaa ctcaagggaa cagtgacacc 3241 cataggagtg cacggggtca aaatgaatta tggtccaccg cccaaggatg ccattgagag 3301 agcctgctcc atgaaagagg aacttttgcg taaaatcgaa ttactgggcg aacgtttgcc 3361 acccaacact ttggatcagc taatcgatga acttggcggg ccggacaatg tagccgaaat 3421 gacaggccgc aaaggacgtg tggtccaatc cgatgatggt tctatacagt acgaatcaag 3481 atcggaacaa gatgttcctc tggaaacctt aaacattacc gaaaaacagc gctttatgga 3541 tggcaccaaa gatgtggcca ttatctcgga ggccgcctca agtggtattt cgctgcaaag 3601 tgatcgtcgt gtgcgcaatc agagacgacg tgtccatatc accctcgaat tgccgtggtc 3661 tgcagatcgc gccatccaac agttcggtcg tacacatcgt tccaatcaag tcaatgcacc 3721 cgaatacata ttcctcatct ccgatttggc gggtgaacga cgtttcgcct ccaccgtggc 3781 caagcgttta gaatcattgg gtgccttaac gcatggcgat cgtagagcta ctgagacgcg 3841 cgacttgtcg caattcaata ttgacaacaa atatggccgt acggctttag aaactgtgat 3901 gaaagctatc atgggctatg aacagccctt ggtgccacca cccaccgatt atcacggcga 3961 attctttaag gatattgcca atgccctgct aggtgtgggt attatagtta atagtgaaac 4021 cacaccgggt ttgttgagct tggacaaaga ctacaataat atatcgaaat ttttgaatag 4081 aattttgggt atgccagtag atttgcaaaa tcgtctattc aaatatttca ctgataccct 4141 ggcggccatt atcaatcagg ctcgcaaggg aggacgtttt gatttgggta ttttagattt 4201 gggagcggct ggcgagaatg taactcgagt caaactggtg cgatttatac gtaaacatgc 4261 cactggcaaa gctcccgccg aattacatac tgtgcgtgtg gagcgaggca tgatatggca 4321 agaggctatt gagaaatatg ccgacttaat ttctgaaaat gaaggctttt atctttcaca 4381 tcaggtgcga aataacaaac gtactgctat tttggctgtc gaattggaaa atcaacctca 4441 aaatgctttg caaagcggca agaagaagga tggtaagccc agtaaaaaag agatcatgtt 4501 ccagatttac cgtcccaata ccggtcttca agtacgtcat gagtcgttag ctgaaatcga 4561 aaagaaatac aaaaaagtaa ccatgtcaga tgccgaaaag cattggaccg aacaatatga 4621 tgcttcggtt aatacctgct cacatgctta ttggaatggt aattgccgta atgtcagcgt 4681 gggtgcagaa tgtgaggttg gtctacgaca acgtttgtat agcgttttgg ctggctctgt 4741 tctatcggtg tggtcgcgag tggaacaaat cttggccatg cgtaatgcca ataataagat 4801 gcaagttata cgcatgaaaa ccacagaagg tgaaaaaatt gtaggcactc tcataccgaa 4861 atcatgtcat gatctattag tacaggatct taagtctgat gccgaaaggg tggaagaagt 4921 caacttctaa aaatacaaaa gcaaactttt aagttaccct aaactaacca aggttacttt 4981 ttataaaaag taccatacaa ctggttaaga aacacacata ttttattttt cataattctt 5041 attaagaata ttttttgaaa aatattctaa aataacaaca aataaacact tgagttgtag 5101 tattaaatag ctacaactgt gaaagaaaaa gaaaaccaac aaaccaaaac gacgcttaat 5161 ttatggactt tatttttcat ttaagtttat ttcctttttt acataattga taaataaaaa 5221 caaaaatatt attcttaaat attacaaaaa cagaaacaaa caatccaaaa taataaaaac 5281 aaaacacaga aaaatttaaa tgaaaccata tacgactttt ataattataa actaaactat 5341 acaaaaatta attataatta atatttaatt ataataacaa taatgcttaa tgattataca 5401 aaaaaaaaga aaaccacatt tgagaaatta tcataactat agtcaataac tcttaaacaa 5461 accggaacac acacacacac acacaaattt taaattataa acctcaaaaa acaaatacaa 5521 gacatcttaa atggatataa tatggttaac ccaaaatagc atacatgggc ggaaagtgat 5581 tgtaacgaca aagaattccc tcaaaaaaaa aaaaaaactc ttgctgtata gtttccctta 5641 ttaatttaaa caggaaatgt ttatttttct tctacatttc agtttaattt cttgtttctt 5701 gcttaatcag ctataggact ttagttatta tttttgatat tctaacaaca aattcaatta 5761 caattgaaat taatccaatt aattccaaaa aaaaactctt aacattatca taatgttgat 5821 attgaattaa atttataatt tattgggaga aaacaaaaac aaaattttat ttcgttatcg 5881 tttccatgtt tttcaaaaac aaaaatatag aaaactgaaa atttgatttt gacttttttt 5941 ttgtacacca aacagagcaa actcagtaaa aacacaaatt aagtttcgtt attttatttt 6001 ctttacggag atcatagttt atttattatt cttaatgcta ttcttactat tattttaaat 6061 attcatttta caaaattatt ttctaaaacc taatttttaa gaaaatttct agtttgtatg 6121 tagtttcgta gaaatgaaaa ccaacaacaa aaacaaaaaa aaatggaaaa aatccaaaaa 6181 aaaaaataaa taaaattcta ttttatgttt gatgtatatg tacattaatg agaactacaa 6241 acagcaacaa acaaaaataa atgaatgaat attgaaataa aaattgaaaa attctaaaat 6301 acaaa