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LOCUS XM_013250100 3325 bp mRNA linear INV 02-SEP-2023 ariadne-1 (LOC106085707), transcript variant X4, mRNA. ACCESSION XM_013250100 VERSION XM_013250100.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250100.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3325 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3325 /gene="LOC106085707" /note="E3 ubiquitin-protein ligase ariadne-1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins" /db_xref="GeneID:106085707" CDS 189..1688 /gene="LOC106085707" /codon_start=1 /product="E3 ubiquitin-protein ligase ariadne-1" /protein_id="XP_013105554.1" /db_xref="GeneID:106085707" /translation="MDSDEDSYEMDSGNVSSGDDGGFEVDMDEVQPEPKADSDEYHYD VLTTEEIVQHQREIIDEVKTVIRLQSTVTRILLNHFKWDKEKLLEKYFDGNTDEFFRG AHVINPFSKPANANKQKNAKTNTAEECEICFSQLPSDSMAGLECGHRFCLTCWREYLT TKIITEGLGQSISCAAHGCDILVDDVTVMKLVTDNRVRIKYQQLITNSFVECNQLLRW CPSIDCTYAIKVSYVDSKPVRCKCGHNFCFVCGENWHDPVKCRWLKKWIKKCDDDSET SNWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCKHDFCWVCLGSWEPHGSSWYNCNR YDEDEAKAARDAQEKFRSSLARYLHYYNRYMNHMQSLKFENKLYASVKHKMEEMQQHN MSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLKKNNQSMIFEDNQKDLESATETLSE YLERDITSENLADIKQKVQDKYRYCEKRCTVLLAHVHEGYEKDWWEYLE" misc_feature 567..743 /gene="LOC106085707" /note="RING finger, HC subclass, found in human homolog of Drosophila ariadne (HHARI) and similar proteins; Region: RING-HC_RBR_HHARI; cd16626" /db_xref="CDD:438288" misc_feature 768..1013 /gene="LOC106085707" /note="BRcat domain found in human homolog of Drosophila Ariadne (HHARI) and similar proteins; Region: BRcat_RBR_HHARI-like; cd20343" /db_xref="CDD:439004" misc_feature 1023..1196 /gene="LOC106085707" /note="Rcat domain found in human homolog of Drosophila Ariadne (HHARI) and similar proteins; Region: Rcat_RBR_HHARI-like; cd20356" /db_xref="CDD:439017" misc_feature 1197..>1553 /gene="LOC106085707" /note="Ariadne domain; Region: Ariadne; pfam19422" /db_xref="CDD:466073" polyA_site 3325 /gene="LOC106085707" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aattttcggg aagataaaaa tctagatatc ttggtttgta ataaagaaaa tttgtgattc 61 taaattgctt gtcagccttt tttgaaagtg tgctatagag tgttgttgtt ttcttgaaat 121 ctacaccatt ttttggtaga aatcttcgat tattctaaac gctaccagtc caacagtaag 181 ctttaattat ggattccgat gaagattcat atgaaatgga ttccggcaat gtatcatcgg 241 gggatgatgg cggttttgag gtggatatgg atgaagtaca accggaacct aaagctgatt 301 cggacgaata ccattatgat gttttgacca ctgaggaaat tgtacaacat caaagggaga 361 taatcgacga agtgaaaaca gtgataaggc ttcaatcaac agtgacacga atattattaa 421 atcactttaa atgggacaag gagaaacttt tggagaaata cttcgatggc aataccgatg 481 agtttttccg tggtgctcat gttataaatc ctttcagtaa acctgccaat gcaaataaac 541 agaagaatgc aaaaactaac acagctgaag agtgtgaaat ttgtttttca caattaccct 601 cagattccat ggctggcttg gaatgtggtc atcgtttttg tttaacttgt tggcgcgaat 661 atcttacaac gaaaatcatt accgaaggtc tcggccaatc aatctcatgt gccgctcacg 721 gctgtgatat tctggtggac gatgttaccg ttatgaaact tgtgaccgat aaccgtgttc 781 gcattaaata ccaacaactg atcaccaaca gctttgtgga gtgcaatcaa ttgttacgct 841 ggtgtccgtc cattgattgc acctatgcaa ttaaagtatc ctatgtggat tcaaagccgg 901 tgcgctgcaa gtgcggccac aatttctgtt ttgtttgtgg cgaaaactgg catgatcccg 961 tcaagtgtcg ctggttaaaa aaatggatca agaaatgtga tgacgattcg gagaccagca 1021 attggatagc agccaacact aaagagtgtc ccaagtgtaa tgtaaccatc gaaaaggatg 1081 gcggctgcaa tcacatggtt tgcaagaacc aaaactgtaa acatgacttc tgttgggtat 1141 gcctaggctc atgggaacca cacggttcgt catggtacaa ctgtaatcgt tatgatgaag 1201 atgaagccaa agctgcacgt gatgctcaag aaaagtttag atcatcatta gcaagatatt 1261 tacattatta caatcgttat atgaatcata tgcaatcttt gaagtttgaa aataaattat 1321 atgcctcggt taaacataaa atggaagaaa tgcagcaaca caatatgtca tggattgaag 1381 tgcaattttt gaaaaaggcc gttgatatat tatgccaatg ccgccaaact ctcatgtata 1441 cgtatgtatt tgcgtattat ttaaaaaaga acaatcaatc aatgatattc gaagataatc 1501 aaaaagattt agaatctgcc acagagacat tatctgaata tttggaacgt gatataacat 1561 cagaaaactt agctgatatc aaacaaaaag ttcaagataa atatagatat tgtgagaaga 1621 ggtgtacagt acttttagct catgtgcatg agggctacga aaaggattgg tgggaatatt 1681 tagaatgacg agatatttca gaaccgttgt tagggcgcta tggtggtaat aaattaaaag 1741 gaaattcatt ataattaaat gataagagaa agaaaagaaa agtaacaaaa acaacatata 1801 aaccataaaa aaagaaaatg taacaaacca accagcaaaa caagtaacaa caacaacaaa 1861 aaaatacaaa ttaaaaaaaa ataaacaaac cccccatttt actataaaaa gttaagcaaa 1921 caaagaaaat ttaatagtta taacaacaat aacaaaaaat aaacaccaac aacaaattaa 1981 tataaaaaag caaaaacaaa acaataacaa tatggttttt ggtccttgaa aacattaaga 2041 gaaatggaaa agaaatcact tggttctaca cacacacaaa cctacgcagc cccaaacaaa 2101 cggtaaaagg caatgaaaag aaaatacaat agcaaaaaca caaactcaca caaacaaaga 2161 aaaacaaagc ccatgacaaa gtgactcatt gaaattaatt tcgaaattaa acaaaaatat 2221 gttaaaaaat gattataatt ctttaaaaca cactgggaga aataatttat gagcaaaacc 2281 aacaatctct atgttatctc tcttacggcc ataattcctc ataagcaaat gcttagcatt 2341 gttaaaatta actacaaaca ttcggcataa aagcatagac cattatttaa agttggattt 2401 agatttgtga aaattgaaag tttttgttaa aatttgtagc cctcaccgcc aagtgattga 2461 ttttgttggg aagtaaagct aaaataagag aacaaatagt gaaaataatc tatatataca 2521 tagaaaggac ttaccaccct taaaaattta aaagcatagt aatttaggct taaaaatctg 2581 ttagttttgt tttaattaga atctaaatat ttttattttt cagctaaatc tgagacacat 2641 ataattccca cacacacaca cacaaaccca ctcacactga cacacttggt attatgttta 2701 atttaaatgc tataaaatca agctttatgg taaaaaaccc cacctccacc ttcgatttct 2761 tcacaagttc atttaatttc tctgttgttg tttttatttc cttgcacaca ggacatttta 2821 agatcccctc tcacttttaa tcccccaaac ttatattttt taaatgttcc acttactctt 2881 aatattcctt aagcgttttt aaattcctta ctttattata tttttttttt taattctttc 2941 ctatgtgcgc tgttttacca ccgttttttt tcatatgcaa taatttttct cattttctat 3001 tttgtttgag accaaatctt ctgcgccttg tttaaaacaa tttttcttcg ttgctctaaa 3061 caaatgatta aatgtaaata gttctctcta tatcttattg aagaaactta aatacaaaaa 3121 gaacacaaag caaataaatt gtataaaaat taaaaaaaaa aataaaaata aatgtctttt 3181 aaaaatgttt cgtcttgcaa agggtgttga caagcattat gcttacatca ccaattgttc 3241 aacatggtat ttttttagaa aaattttgcc caaatttagg tgagaaaatt tcttaatgtg 3301 cagaaataaa attttttgaa acttt