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LOCUS XM_013250093 4235 bp mRNA linear INV 02-SEP-2023 tousled-like 1 (LOC106085715), transcript variant X11, mRNA. ACCESSION XM_013250093 VERSION XM_013250093.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250093.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4235 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4235 /gene="LOC106085715" /note="serine/threonine-protein kinase tousled-like 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106085715" CDS 297..4106 /gene="LOC106085715" /codon_start=1 /product="serine/threonine-protein kinase tousled-like 1 isoform X6" /protein_id="XP_013105547.1" /db_xref="GeneID:106085715" /translation="MSAGAQLQMAPQTSTSISHHTTPQQQQQHFVHNPQQQPQQQAQP QQQQAILSQVQQPQPQIIQQQTHQQQQQQQQLQLQQQHITHYTQQPPTLATAHHTTHL QPHPQQQPQHHHLQGQTPQQGSQLPQQQQHTQHLLLHQQQQHSGGGHSSNPDSNMSTG SSHSEKDVVNPDMLSTQQQSSGIVQQIGILQQQQTTVNVSPAGNGMMNTSGMGISADP NAMQTTNHHLPHQLTHQQQTVGGGAAGGVVGTTTTGRMEKLSRTPTERKRKRKIAALH ADDSGGAGGGGGGGGPGSGNGGNNNSSNASKSAKHNNSSSSSGTQLLKPNLSLNLGAQ QDRLQMPGSGVGGGGKTPRLLPPGSGGSVGDNKKINDYFNAKHSVQSAANSPMRHTAG GGSKSPSSAGPQQQSQQPGPQAQQVPTSVGGNSTYPMYPPSPQQPQMPAPGIPPTPTS QPPPPDFHYSSVVAANSVTGKQQRQQQTSNAMVPPQSPLVGVGNVGLMSSSHMVHNQS AAGAAALLGGQATTGAGGGGNGPPPPPLPQQQQQPTLQLPASSVVATTVQQTLTTSQQ QQLAAAAAAQLNSLQHAGMLTNPGGGVPQNAGAPQQQPSTAMVTKATQTDLSQHEMQE RESESETSKSKLDEMTRLSDEQKCQIIAHQKLIDQHKSHIAKCIDVVKKLLKEKSSIE KKEARQKCMQNRLRLGQFVTQRVGATFQENWTDGYAFQELSRRQEEISAEREEIDRQK KQLMKKRPAESGRKRNNNSQQNSNSNDSSNLNAGCDRLSGNDSGIGSVTSGSGGGGSG RGLTRSNSTQAQSQLLHNGGGSGTSGTGIGSDRLSDRGGGGSGRGDNSGSGSDSATFL KPDPVSGVYTAQEYYEYDEILKLRQNALKKEDADLQLEMEKLERERNLHIRELKRILN EDQSRFNNHPVLNDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKK ANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI PEREARSIIMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM DDENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK KPFGHNQSQATILEENTILKATEVQFSNKPTVSNEAKSFIRGCLAYRKEDRMDVFSLA RHEYIQPPIPKHGRGQSLTQQQQQQQQQQQQQQQQQQSSGNQANSAGQTSFSAGMFGN LNQSSSS" misc_feature <2097..>2537 /gene="LOC106085715" /note="Family of unknown function (DUF5401); Region: DUF5401; pfam17380" /db_xref="CDD:375164" misc_feature 3117..3920 /gene="LOC106085715" /note="Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; Region: STKc_TLK; cd13990" /db_xref="CDD:270892" misc_feature order(3126..3128,3165..3167,3171..3173,3279..3281, 3330..3341,3351..3353,3357..3359,3474..3476,3480..3482, 3486..3491,3495..3497,3537..3539,3546..3548,3615..3626) /gene="LOC106085715" /note="active site" /db_xref="CDD:270892" misc_feature order(3351..3353,3357..3359,3474..3476,3480..3482, 3486..3488,3546..3548,3615..3626) /gene="LOC106085715" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270892" misc_feature order(3534..3572,3585..3626) /gene="LOC106085715" /note="activation loop (A-loop); other site" /db_xref="CDD:270892" ORIGIN 1 gcaaaaatgt gacaacgatg gcaaatattt tgctcgacaa tttgcaattt acatacaaaa 61 gtatctttga caaagaacaa acgaacgaca gctgtttcca tcgtcatctt tcctaaacat 121 aaaaaaaagt aaaatacaaa aagaagtaac acccgatgga aataagaaaa aaacttacga 181 ttaattaatg aattaaactt aaggtttaca aaaaaataaa gaccaacgca aaaaaaccct 241 caaaaaattt tgttcgagga ggctaactat catgaaaatg atgtcgtcta aaagatatgt 301 ccgccggcgc tcaattgcag atggccccac agacatcgac gtcaataagc catcatacaa 361 cgccacagca acagcaacaa cattttgttc ataatcctca acagcagccg caacaacagg 421 cgcaaccaca gcagcagcaa gctatattgt cacaagtcca gcagccgcag cctcaaataa 481 tacaacagca aacacatcaa caacagcagc agcaacaaca attgcagttg caacagcagc 541 atataacaca ttatacacaa cagcctccga cgcttgccac agcacaccat acaacacatc 601 ttcaaccgca cccacagcaa caaccacagc atcaccatct tcaagggcaa acgccgcaac 661 aaggaagcca gcttccacag caacagcaac atacgcaaca tttgctgttg catcagcagc 721 agcaacatag cggcggtggt cacagcagta atcctgactc gaatatgagc actggctctt 781 cgcacagcga aaaagatgtt gttaatccag atatgttaag cacacagcaa caatccagcg 841 gtattgtcca acaaattggt attttacaac aacagcaaac aactgtcaac gtttcgccag 901 ctggcaacgg tatgatgaac accagcggta tgggtatatc agctgatcct aatgccatgc 961 aaaccacaaa ccaccacctt ccacaccaac tgacacatca gcaacagacc gtgggcggtg 1021 gcgctgctgg tggggttgtt ggaacaacga ccacaggtcg catggaaaaa ctatcacgaa 1081 caccaactga acgtaaacga aaaagaaaga tagccgcatt gcatgcggat gatagtggtg 1141 gtgccggtgg tggaggtgga ggcggcggtc ctggcagtgg caatggaggt aataataatt 1201 caagcaacgc tagtaaatca gctaaacaca acaattcctc ctcctcctca ggcacacagt 1261 tattaaaacc aaatttatct ctaaatttag gtgctcaaca ggatcgtctc caaatgcccg 1321 gttcaggtgt aggagggggc ggcaagacgc cgcgactatt gccgcccggt agcggtggtt 1381 cagttggcga taataaaaaa attaacgact attttaatgc gaaacacagt gtacagtcag 1441 cggccaatag tcctatgagg catacagctg ggggtggctc gaagagcccc tcatcggctg 1501 gcccgcagca gcagtcgcag cagccggggc cacaggccca acaagtgcca acatccgtag 1561 gcggtaacag cacgtatccc atgtatccac ctagtccaca acaaccacaa atgccagcac 1621 ctggcatacc gcccacaccc acgtcacaac ccccgcctcc agatttccat tacagtagtg 1681 tagtggccgc caactcggta acgggcaagc agcaaaggca acagcaaact tccaatgcaa 1741 tggttcctcc gcaatcacca ctcgttggtg tcggtaatgt tggtctaatg tcatcctccc 1801 acatggtaca caaccaatca gcagctgggg cggcagccct attgggtggc caagcaacaa 1861 caggtgcggg cggcggaggc aatggcccac caccccctcc tctgccacaa cagcagcaac 1921 agccaactct tcaacttccc gcctcttccg tcgttgctac caccgtgcaa caaacactga 1981 cgacctcgca gcaacagcaa ctggctgctg cagcggccgc ccaactgaat tcactgcaac 2041 atgccggcat gctgacaaac ccaggcggcg gtgtaccaca gaacgccggt gcgccccagc 2101 agcaaccctc gacagcgatg gttaccaaag caacacaaac cgacctctca caacacgaaa 2161 tgcaagagcg tgaatcggaa agtgaaacaa gtaaatcaaa attggatgag atgacaagac 2221 tgtctgatga acaaaaatgt caaattattg ctcatcaaaa actaatcgat caacataaat 2281 cccacatagc caagtgtatt gatgtggtca agaagctact gaaggagaag tccagcattg 2341 agaaaaagga ggctcgccag aaatgtatgc agaatcgcct gcggctgggc caattcgtta 2401 cacagcgtgt aggtgctaca ttccaggaga actggactga tggttatgcc ttccaggagt 2461 tgagccgacg acaggaggaa atctccgctg agcgcgaaga aatcgatcgt caaaagaagc 2521 aactaatgaa gaaacggcct gccgaatctg gtcgaaagcg taacaacaat agccagcaga 2581 attccaattc caatgattcc tccaacctga atgccggttg tgatcgccta tcgggcaatg 2641 acagcggcat tggtagtgta acttcagggt ccggcggtgg tggaagtggt cgtggcctga 2701 cgcgatcaaa ttcaacgcaa gctcaaagtc aactgctaca caatggcggt ggcagtggca 2761 ccagtggcac tggcataggt agtgatcgcc tatcggatcg cggaggtggc ggttcgggac 2821 gcggcgataa ttctggcagt ggttccgatt cagcaacgtt ccttaaaccc gatcctgtat 2881 cgggtgtcta taccgctcaa gaatattacg aatatgatga gattcttaaa ctacgtcaaa 2941 atgctctcaa aaaagaagat gccgatcttc agttggaaat ggagaagtta gaacgtgaac 3001 gcaatttgca tatacgtgaa ttgaaacgca ttttaaatga agatcagtcc cgctttaata 3061 atcatccagt attgaatgat cgttacctat tgctgatgct attgggtaaa ggtggtttct 3121 ctgaagtcca taaagcattc gatttaaagg aacaacgtta tgttgcatgt aaagttcatc 3181 aattgaataa ggattggaaa gaagataaaa aggccaacta tatcaaacat gctttaagag 3241 aatataatat tcataaggca ctcgatcatc ctagagtggt gaaattatac gatgtctttg 3301 aaattgatgc caattcattt tgtacggttt tggaatattg tgatggtcat gatttagatt 3361 tttatctaaa acaacataag acgataccag aacgtgaagc acgttcaata atcatgcagg 3421 ttgtttctgc tttaaaatat ttgaatgaga ttaaaccacc agtcatacat tacgatttga 3481 aacctggtaa tattttatta accgagggca atgtatgtgg cgagatcaaa ataaccgatt 3541 ttggtttgtc caaagtaatg gacgatgaaa attataatcc agatcatggc atggacctaa 3601 cctcccaagg agcaggaaca tattggtatt taccacctga atgctttgtt gtgggtaaaa 3661 atcctccaaa aatctcttca aaagtcgatg tatggagtgt gggtgttatt ttctatcagt 3721 gtctgtatgg caagaaaccg tttggccata atcaatcaca agctactatc ttagaggaga 3781 atacgatttt aaaagcaact gaagtacaat tctccaacaa gcccacagtg tctaatgaag 3841 ctaagagttt tattagaggc tgtctggctt atcgcaaaga agatcgcatg gatgtatttt 3901 cgctggcgcg gcatgaatac atacaacccc ccattccgaa gcatggccgt ggtcaatcgc 3961 ttacccaaca acagcagcaa caacaacagc agcaacaaca gcagcagcaa cagcagcaat 4021 catcaggtaa tcaagccaac tctgccggac agacatcatt ctcagcgggc atgtttggca 4081 atttgaatca atcgagttcg tcctagctgc acactaaacg taattccaat tcataattgt 4141 taaagttaat acaaagtaat agtagcaaca tcaatcataa tcaacacaac aacaacaaca 4201 acaataataa caccaacaat catcatccac aacag