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LOCUS XM_013250091 4858 bp mRNA linear INV 02-SEP-2023 tousled-like 1 (LOC106085715), transcript variant X8, mRNA. ACCESSION XM_013250091 VERSION XM_013250091.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250091.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4858 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4858 /gene="LOC106085715" /note="serine/threonine-protein kinase tousled-like 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106085715" CDS 920..4729 /gene="LOC106085715" /codon_start=1 /product="serine/threonine-protein kinase tousled-like 1 isoform X6" /protein_id="XP_013105545.1" /db_xref="GeneID:106085715" /translation="MSAGAQLQMAPQTSTSISHHTTPQQQQQHFVHNPQQQPQQQAQP QQQQAILSQVQQPQPQIIQQQTHQQQQQQQQLQLQQQHITHYTQQPPTLATAHHTTHL QPHPQQQPQHHHLQGQTPQQGSQLPQQQQHTQHLLLHQQQQHSGGGHSSNPDSNMSTG SSHSEKDVVNPDMLSTQQQSSGIVQQIGILQQQQTTVNVSPAGNGMMNTSGMGISADP NAMQTTNHHLPHQLTHQQQTVGGGAAGGVVGTTTTGRMEKLSRTPTERKRKRKIAALH ADDSGGAGGGGGGGGPGSGNGGNNNSSNASKSAKHNNSSSSSGTQLLKPNLSLNLGAQ QDRLQMPGSGVGGGGKTPRLLPPGSGGSVGDNKKINDYFNAKHSVQSAANSPMRHTAG GGSKSPSSAGPQQQSQQPGPQAQQVPTSVGGNSTYPMYPPSPQQPQMPAPGIPPTPTS QPPPPDFHYSSVVAANSVTGKQQRQQQTSNAMVPPQSPLVGVGNVGLMSSSHMVHNQS AAGAAALLGGQATTGAGGGGNGPPPPPLPQQQQQPTLQLPASSVVATTVQQTLTTSQQ QQLAAAAAAQLNSLQHAGMLTNPGGGVPQNAGAPQQQPSTAMVTKATQTDLSQHEMQE RESESETSKSKLDEMTRLSDEQKCQIIAHQKLIDQHKSHIAKCIDVVKKLLKEKSSIE KKEARQKCMQNRLRLGQFVTQRVGATFQENWTDGYAFQELSRRQEEISAEREEIDRQK KQLMKKRPAESGRKRNNNSQQNSNSNDSSNLNAGCDRLSGNDSGIGSVTSGSGGGGSG RGLTRSNSTQAQSQLLHNGGGSGTSGTGIGSDRLSDRGGGGSGRGDNSGSGSDSATFL KPDPVSGVYTAQEYYEYDEILKLRQNALKKEDADLQLEMEKLERERNLHIRELKRILN EDQSRFNNHPVLNDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKK ANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI PEREARSIIMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVM DDENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK KPFGHNQSQATILEENTILKATEVQFSNKPTVSNEAKSFIRGCLAYRKEDRMDVFSLA RHEYIQPPIPKHGRGQSLTQQQQQQQQQQQQQQQQQQSSGNQANSAGQTSFSAGMFGN LNQSSSS" misc_feature <2720..>3160 /gene="LOC106085715" /note="Family of unknown function (DUF5401); Region: DUF5401; pfam17380" /db_xref="CDD:375164" misc_feature 3740..4543 /gene="LOC106085715" /note="Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; Region: STKc_TLK; cd13990" /db_xref="CDD:270892" misc_feature order(3749..3751,3788..3790,3794..3796,3902..3904, 3953..3964,3974..3976,3980..3982,4097..4099,4103..4105, 4109..4114,4118..4120,4160..4162,4169..4171,4238..4249) /gene="LOC106085715" /note="active site" /db_xref="CDD:270892" misc_feature order(3974..3976,3980..3982,4097..4099,4103..4105, 4109..4111,4169..4171,4238..4249) /gene="LOC106085715" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270892" misc_feature order(4157..4195,4208..4249) /gene="LOC106085715" /note="activation loop (A-loop); other site" /db_xref="CDD:270892" ORIGIN 1 gctgctgctg ctgtggctac ggcagctaat ttgctgttgt tgtcgttgct gtatttatta 61 ttgttattat tattattgtt attattttgg tgtgcttttt tgtattgtag atagatatgt 121 tcgcatgtcg gtatgaacga acctctgaat gtttgtatga acgagtatac acgacggacg 181 atataggcag gcggctacaa cgtattttag ctttagcaac atttagtctc aatttgtttg 241 tgcttcaaca ataaacggaa attatacaca acacacaaaa atccacacga gaagaaattg 301 aaaattgaat taaaacgagt caaaaaacaa caacaaccac aacaaaaagg ggaaacaacg 361 ataacaaagg caaaaataat aaaaaaaaca gacattaaac aacctcaatt agcgttgcta 421 atatacataa ttcaaccgat ttattattgc catttgcgaa aaagcaactg aaaattgcaa 481 gttttgtgtt tctaataaaa taaagtgaat tataaaaaaa ataataataa aaacacacca 541 gcgggagata agtgcaaatt aaattaattt ttaagaaaaa attccaagta gattgtttaa 601 aaagtgactt gacaataaaa gtcaaaaaca aacatgctgc atatggagag ggagaacaac 661 taacaaagag tactatatcg agaaagagcg taagagagag agagagcaag cggaaggctt 721 catttgctcc ttggagcata tgctattgta ataaattatg attagaagtg atatgcaaac 781 ttatcgtccc aatatgtgtc aaccatagaa ttttttggac atttttctcc acaaaaattt 841 cttttataca tcgccacagt ctttgggtat tcttctttga ttttgctgac gaataatttc 901 tccagcaaca agtttaaaga tgtccgccgg cgctcaattg cagatggccc cacagacatc 961 gacgtcaata agccatcata caacgccaca gcaacagcaa caacattttg ttcataatcc 1021 tcaacagcag ccgcaacaac aggcgcaacc acagcagcag caagctatat tgtcacaagt 1081 ccagcagccg cagcctcaaa taatacaaca gcaaacacat caacaacagc agcagcaaca 1141 acaattgcag ttgcaacagc agcatataac acattataca caacagcctc cgacgcttgc 1201 cacagcacac catacaacac atcttcaacc gcacccacag caacaaccac agcatcacca 1261 tcttcaaggg caaacgccgc aacaaggaag ccagcttcca cagcaacagc aacatacgca 1321 acatttgctg ttgcatcagc agcagcaaca tagcggcggt ggtcacagca gtaatcctga 1381 ctcgaatatg agcactggct cttcgcacag cgaaaaagat gttgttaatc cagatatgtt 1441 aagcacacag caacaatcca gcggtattgt ccaacaaatt ggtattttac aacaacagca 1501 aacaactgtc aacgtttcgc cagctggcaa cggtatgatg aacaccagcg gtatgggtat 1561 atcagctgat cctaatgcca tgcaaaccac aaaccaccac cttccacacc aactgacaca 1621 tcagcaacag accgtgggcg gtggcgctgc tggtggggtt gttggaacaa cgaccacagg 1681 tcgcatggaa aaactatcac gaacaccaac tgaacgtaaa cgaaaaagaa agatagccgc 1741 attgcatgcg gatgatagtg gtggtgccgg tggtggaggt ggaggcggcg gtcctggcag 1801 tggcaatgga ggtaataata attcaagcaa cgctagtaaa tcagctaaac acaacaattc 1861 ctcctcctcc tcaggcacac agttattaaa accaaattta tctctaaatt taggtgctca 1921 acaggatcgt ctccaaatgc ccggttcagg tgtaggaggg ggcggcaaga cgccgcgact 1981 attgccgccc ggtagcggtg gttcagttgg cgataataaa aaaattaacg actattttaa 2041 tgcgaaacac agtgtacagt cagcggccaa tagtcctatg aggcatacag ctgggggtgg 2101 ctcgaagagc ccctcatcgg ctggcccgca gcagcagtcg cagcagccgg ggccacaggc 2161 ccaacaagtg ccaacatccg taggcggtaa cagcacgtat cccatgtatc cacctagtcc 2221 acaacaacca caaatgccag cacctggcat accgcccaca cccacgtcac aacccccgcc 2281 tccagatttc cattacagta gtgtagtggc cgccaactcg gtaacgggca agcagcaaag 2341 gcaacagcaa acttccaatg caatggttcc tccgcaatca ccactcgttg gtgtcggtaa 2401 tgttggtcta atgtcatcct cccacatggt acacaaccaa tcagcagctg gggcggcagc 2461 cctattgggt ggccaagcaa caacaggtgc gggcggcgga ggcaatggcc caccaccccc 2521 tcctctgcca caacagcagc aacagccaac tcttcaactt cccgcctctt ccgtcgttgc 2581 taccaccgtg caacaaacac tgacgacctc gcagcaacag caactggctg ctgcagcggc 2641 cgcccaactg aattcactgc aacatgccgg catgctgaca aacccaggcg gcggtgtacc 2701 acagaacgcc ggtgcgcccc agcagcaacc ctcgacagcg atggttacca aagcaacaca 2761 aaccgacctc tcacaacacg aaatgcaaga gcgtgaatcg gaaagtgaaa caagtaaatc 2821 aaaattggat gagatgacaa gactgtctga tgaacaaaaa tgtcaaatta ttgctcatca 2881 aaaactaatc gatcaacata aatcccacat agccaagtgt attgatgtgg tcaagaagct 2941 actgaaggag aagtccagca ttgagaaaaa ggaggctcgc cagaaatgta tgcagaatcg 3001 cctgcggctg ggccaattcg ttacacagcg tgtaggtgct acattccagg agaactggac 3061 tgatggttat gccttccagg agttgagccg acgacaggag gaaatctccg ctgagcgcga 3121 agaaatcgat cgtcaaaaga agcaactaat gaagaaacgg cctgccgaat ctggtcgaaa 3181 gcgtaacaac aatagccagc agaattccaa ttccaatgat tcctccaacc tgaatgccgg 3241 ttgtgatcgc ctatcgggca atgacagcgg cattggtagt gtaacttcag ggtccggcgg 3301 tggtggaagt ggtcgtggcc tgacgcgatc aaattcaacg caagctcaaa gtcaactgct 3361 acacaatggc ggtggcagtg gcaccagtgg cactggcata ggtagtgatc gcctatcgga 3421 tcgcggaggt ggcggttcgg gacgcggcga taattctggc agtggttccg attcagcaac 3481 gttccttaaa cccgatcctg tatcgggtgt ctataccgct caagaatatt acgaatatga 3541 tgagattctt aaactacgtc aaaatgctct caaaaaagaa gatgccgatc ttcagttgga 3601 aatggagaag ttagaacgtg aacgcaattt gcatatacgt gaattgaaac gcattttaaa 3661 tgaagatcag tcccgcttta ataatcatcc agtattgaat gatcgttacc tattgctgat 3721 gctattgggt aaaggtggtt tctctgaagt ccataaagca ttcgatttaa aggaacaacg 3781 ttatgttgca tgtaaagttc atcaattgaa taaggattgg aaagaagata aaaaggccaa 3841 ctatatcaaa catgctttaa gagaatataa tattcataag gcactcgatc atcctagagt 3901 ggtgaaatta tacgatgtct ttgaaattga tgccaattca ttttgtacgg ttttggaata 3961 ttgtgatggt catgatttag atttttatct aaaacaacat aagacgatac cagaacgtga 4021 agcacgttca ataatcatgc aggttgtttc tgctttaaaa tatttgaatg agattaaacc 4081 accagtcata cattacgatt tgaaacctgg taatatttta ttaaccgagg gcaatgtatg 4141 tggcgagatc aaaataaccg attttggttt gtccaaagta atggacgatg aaaattataa 4201 tccagatcat ggcatggacc taacctccca aggagcagga acatattggt atttaccacc 4261 tgaatgcttt gttgtgggta aaaatcctcc aaaaatctct tcaaaagtcg atgtatggag 4321 tgtgggtgtt attttctatc agtgtctgta tggcaagaaa ccgtttggcc ataatcaatc 4381 acaagctact atcttagagg agaatacgat tttaaaagca actgaagtac aattctccaa 4441 caagcccaca gtgtctaatg aagctaagag ttttattaga ggctgtctgg cttatcgcaa 4501 agaagatcgc atggatgtat tttcgctggc gcggcatgaa tacatacaac cccccattcc 4561 gaagcatggc cgtggtcaat cgcttaccca acaacagcag caacaacaac agcagcaaca 4621 acagcagcag caacagcagc aatcatcagg taatcaagcc aactctgccg gacagacatc 4681 attctcagcg ggcatgtttg gcaatttgaa tcaatcgagt tcgtcctagc tgcacactaa 4741 acgtaattcc aattcataat tgttaaagtt aatacaaagt aatagtagca acatcaatca 4801 taatcaacac aacaacaaca acaacaataa taacaccaac aatcatcatc cacaacag