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LOCUS XM_013250090 3598 bp mRNA linear INV 02-SEP-2023 ariadne-1 (LOC106085707), transcript variant X3, mRNA. ACCESSION XM_013250090 VERSION XM_013250090.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250090.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3598 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3598 /gene="LOC106085707" /note="E3 ubiquitin-protein ligase ariadne-1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins" /db_xref="GeneID:106085707" CDS 462..1961 /gene="LOC106085707" /codon_start=1 /product="E3 ubiquitin-protein ligase ariadne-1" /protein_id="XP_013105544.1" /db_xref="GeneID:106085707" /translation="MDSDEDSYEMDSGNVSSGDDGGFEVDMDEVQPEPKADSDEYHYD VLTTEEIVQHQREIIDEVKTVIRLQSTVTRILLNHFKWDKEKLLEKYFDGNTDEFFRG AHVINPFSKPANANKQKNAKTNTAEECEICFSQLPSDSMAGLECGHRFCLTCWREYLT TKIITEGLGQSISCAAHGCDILVDDVTVMKLVTDNRVRIKYQQLITNSFVECNQLLRW CPSIDCTYAIKVSYVDSKPVRCKCGHNFCFVCGENWHDPVKCRWLKKWIKKCDDDSET SNWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCKHDFCWVCLGSWEPHGSSWYNCNR YDEDEAKAARDAQEKFRSSLARYLHYYNRYMNHMQSLKFENKLYASVKHKMEEMQQHN MSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLKKNNQSMIFEDNQKDLESATETLSE YLERDITSENLADIKQKVQDKYRYCEKRCTVLLAHVHEGYEKDWWEYLE" misc_feature 840..1016 /gene="LOC106085707" /note="RING finger, HC subclass, found in human homolog of Drosophila ariadne (HHARI) and similar proteins; Region: RING-HC_RBR_HHARI; cd16626" /db_xref="CDD:438288" misc_feature 1041..1286 /gene="LOC106085707" /note="BRcat domain found in human homolog of Drosophila Ariadne (HHARI) and similar proteins; Region: BRcat_RBR_HHARI-like; cd20343" /db_xref="CDD:439004" misc_feature 1296..1469 /gene="LOC106085707" /note="Rcat domain found in human homolog of Drosophila Ariadne (HHARI) and similar proteins; Region: Rcat_RBR_HHARI-like; cd20356" /db_xref="CDD:439017" misc_feature 1470..>1826 /gene="LOC106085707" /note="Ariadne domain; Region: Ariadne; pfam19422" /db_xref="CDD:466073" polyA_site 3598 /gene="LOC106085707" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttaatagcct tgaactttgt tgttgttgct tttattgaca actactggcg tgtgtatctt 61 tgaatatttt atcaaatcca gaaataaatg tttccttaaa atgaaataaa cggccattaa 121 agctaaatct tgtttgtgat tttcgtgtga ttctcattgg aaaattttgc gttgtcttct 181 atcatcactc gctccaattc gattgtgtga ttaaaagagt tgtatgtgag agaggggtca 241 agcaagagag taaaaacgag cagagtaaat gcaaagagac atcagtgaag aaatctagat 301 atcttggttt gtaataaaga aaatttgtga ttctaaattg cttgtcagcc ttttttgaaa 361 gtgtgctata gagtgttgtt gttttcttga aatctacacc attttttggt agaaatcttc 421 gattattcta aacgctacca gtccaacagt aagctttaat tatggattcc gatgaagatt 481 catatgaaat ggattccggc aatgtatcat cgggggatga tggcggtttt gaggtggata 541 tggatgaagt acaaccggaa cctaaagctg attcggacga ataccattat gatgttttga 601 ccactgagga aattgtacaa catcaaaggg agataatcga cgaagtgaaa acagtgataa 661 ggcttcaatc aacagtgaca cgaatattat taaatcactt taaatgggac aaggagaaac 721 ttttggagaa atacttcgat ggcaataccg atgagttttt ccgtggtgct catgttataa 781 atcctttcag taaacctgcc aatgcaaata aacagaagaa tgcaaaaact aacacagctg 841 aagagtgtga aatttgtttt tcacaattac cctcagattc catggctggc ttggaatgtg 901 gtcatcgttt ttgtttaact tgttggcgcg aatatcttac aacgaaaatc attaccgaag 961 gtctcggcca atcaatctca tgtgccgctc acggctgtga tattctggtg gacgatgtta 1021 ccgttatgaa acttgtgacc gataaccgtg ttcgcattaa ataccaacaa ctgatcacca 1081 acagctttgt ggagtgcaat caattgttac gctggtgtcc gtccattgat tgcacctatg 1141 caattaaagt atcctatgtg gattcaaagc cggtgcgctg caagtgcggc cacaatttct 1201 gttttgtttg tggcgaaaac tggcatgatc ccgtcaagtg tcgctggtta aaaaaatgga 1261 tcaagaaatg tgatgacgat tcggagacca gcaattggat agcagccaac actaaagagt 1321 gtcccaagtg taatgtaacc atcgaaaagg atggcggctg caatcacatg gtttgcaaga 1381 accaaaactg taaacatgac ttctgttggg tatgcctagg ctcatgggaa ccacacggtt 1441 cgtcatggta caactgtaat cgttatgatg aagatgaagc caaagctgca cgtgatgctc 1501 aagaaaagtt tagatcatca ttagcaagat atttacatta ttacaatcgt tatatgaatc 1561 atatgcaatc tttgaagttt gaaaataaat tatatgcctc ggttaaacat aaaatggaag 1621 aaatgcagca acacaatatg tcatggattg aagtgcaatt tttgaaaaag gccgttgata 1681 tattatgcca atgccgccaa actctcatgt atacgtatgt atttgcgtat tatttaaaaa 1741 agaacaatca atcaatgata ttcgaagata atcaaaaaga tttagaatct gccacagaga 1801 cattatctga atatttggaa cgtgatataa catcagaaaa cttagctgat atcaaacaaa 1861 aagttcaaga taaatataga tattgtgaga agaggtgtac agtactttta gctcatgtgc 1921 atgagggcta cgaaaaggat tggtgggaat atttagaatg acgagatatt tcagaaccgt 1981 tgttagggcg ctatggtggt aataaattaa aaggaaattc attataatta aatgataaga 2041 gaaagaaaag aaaagtaaca aaaacaacat ataaaccata aaaaaagaaa atgtaacaaa 2101 ccaaccagca aaacaagtaa caacaacaac aaaaaaatac aaattaaaaa aaaataaaca 2161 aaccccccat tttactataa aaagttaagc aaacaaagaa aatttaatag ttataacaac 2221 aataacaaaa aataaacacc aacaacaaat taatataaaa aagcaaaaac aaaacaataa 2281 caatatggtt tttggtcctt gaaaacatta agagaaatgg aaaagaaatc acttggttct 2341 acacacacac aaacctacgc agccccaaac aaacggtaaa aggcaatgaa aagaaaatac 2401 aatagcaaaa acacaaactc acacaaacaa agaaaaacaa agcccatgac aaagtgactc 2461 attgaaatta atttcgaaat taaacaaaaa tatgttaaaa aatgattata attctttaaa 2521 acacactggg agaaataatt tatgagcaaa accaacaatc tctatgttat ctctcttacg 2581 gccataattc ctcataagca aatgcttagc attgttaaaa ttaactacaa acattcggca 2641 taaaagcata gaccattatt taaagttgga tttagatttg tgaaaattga aagtttttgt 2701 taaaatttgt agccctcacc gccaagtgat tgattttgtt gggaagtaaa gctaaaataa 2761 gagaacaaat agtgaaaata atctatatat acatagaaag gacttaccac ccttaaaaat 2821 ttaaaagcat agtaatttag gcttaaaaat ctgttagttt tgttttaatt agaatctaaa 2881 tatttttatt tttcagctaa atctgagaca catataattc ccacacacac acacacaaac 2941 ccactcacac tgacacactt ggtattatgt ttaatttaaa tgctataaaa tcaagcttta 3001 tggtaaaaaa ccccacctcc accttcgatt tcttcacaag ttcatttaat ttctctgttg 3061 ttgtttttat ttccttgcac acaggacatt ttaagatccc ctctcacttt taatccccca 3121 aacttatatt ttttaaatgt tccacttact cttaatattc cttaagcgtt tttaaattcc 3181 ttactttatt atattttttt ttttaattct ttcctatgtg cgctgtttta ccaccgtttt 3241 ttttcatatg caataatttt tctcattttc tattttgttt gagaccaaat cttctgcgcc 3301 ttgtttaaaa caatttttct tcgttgctct aaacaaatga ttaaatgtaa atagttctct 3361 ctatatctta ttgaagaaac ttaaatacaa aaagaacaca aagcaaataa attgtataaa 3421 aattaaaaaa aaaaataaaa ataaatgtct tttaaaaatg tttcgtcttg caaagggtgt 3481 tgacaagcat tatgcttaca tcaccaattg ttcaacatgg tattttttta gaaaaatttt 3541 gcccaaattt aggtgagaaa atttcttaat gtgcagaaat aaaatttttt gaaacttt