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LOCUS XM_013250088 4037 bp mRNA linear INV 02-SEP-2023 tousled-like 1 (LOC106085715), transcript variant X6, mRNA. ACCESSION XM_013250088 VERSION XM_013250088.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250088.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4037 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4037 /gene="LOC106085715" /note="serine/threonine-protein kinase tousled-like 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106085715" CDS 57..3908 /gene="LOC106085715" /codon_start=1 /product="serine/threonine-protein kinase tousled-like 1 isoform X4" /protein_id="XP_013105542.1" /db_xref="GeneID:106085715" /translation="MANILLDNLQFTYKMSAGAQLQMAPQTSTSISHHTTPQQQQQHF VHNPQQQPQQQAQPQQQQAILSQVQQPQPQIIQQQTHQQQQQQQQLQLQQQHITHYTQ QPPTLATAHHTTHLQPHPQQQPQHHHLQGQTPQQGSQLPQQQQHTQHLLLHQQQQHSG GGHSSNPDSNMSTGSSHSEKDVVNPDMLSTQQQSSGIVQQIGILQQQQTTVNVSPAGN GMMNTSGMGISADPNAMQTTNHHLPHQLTHQQQTVGGGAAGGVVGTTTTGRMEKLSRT PTERKRKRKIAALHADDSGGAGGGGGGGGPGSGNGGNNNSSNASKSAKHNNSSSSSGT QLLKPNLSLNLGAQQDRLQMPGSGVGGGGKTPRLLPPGSGGSVGDNKKINDYFNAKHS VQSAANSPMRHTAGGGSKSPSSAGPQQQSQQPGPQAQQVPTSVGGNSTYPMYPPSPQQ PQMPAPGIPPTPTSQPPPPDFHYSSVVAANSVTGKQQRQQQTSNAMVPPQSPLVGVGN VGLMSSSHMVHNQSAAGAAALLGGQATTGAGGGGNGPPPPPLPQQQQQPTLQLPASSV VATTVQQTLTTSQQQQLAAAAAAQLNSLQHAGMLTNPGGGVPQNAGAPQQQPSTAMVT KATQTDLSQHEMQERESESETSKSKLDEMTRLSDEQKCQIIAHQKLIDQHKSHIAKCI DVVKKLLKEKSSIEKKEARQKCMQNRLRLGQFVTQRVGATFQENWTDGYAFQELSRRQ EEISAEREEIDRQKKQLMKKRPAESGRKRNNNSQQNSNSNDSSNLNAGCDRLSGNDSG IGSVTSGSGGGGSGRGLTRSNSTQAQSQLLHNGGGSGTSGTGIGSDRLSDRGGGGSGR GDNSGSGSDSATFLKPDPVSGVYTAQEYYEYDEILKLRQNALKKEDADLQLEMEKLER ERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLMLLGKGGFSEVHKAFDLKEQRYVAC KVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCD GHDLDFYLKQHKTIPEREARSIIMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVC GEIKITDFGLSKVMDDENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDV WSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFSNKPTVSNEAKSFIRGCL AYRKEDRMDVFSLARHEYIQPPIPKHGRGQSLTQQQQQQQQQQQQQQQQQQSSGNQAN SAGQTSFSAGMFGNLNQSSSS" misc_feature <1899..>2339 /gene="LOC106085715" /note="Family of unknown function (DUF5401); Region: DUF5401; pfam17380" /db_xref="CDD:375164" misc_feature 2919..3722 /gene="LOC106085715" /note="Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; Region: STKc_TLK; cd13990" /db_xref="CDD:270892" misc_feature order(2928..2930,2967..2969,2973..2975,3081..3083, 3132..3143,3153..3155,3159..3161,3276..3278,3282..3284, 3288..3293,3297..3299,3339..3341,3348..3350,3417..3428) /gene="LOC106085715" /note="active site" /db_xref="CDD:270892" misc_feature order(3153..3155,3159..3161,3276..3278,3282..3284, 3288..3290,3348..3350,3417..3428) /gene="LOC106085715" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270892" misc_feature order(3336..3374,3387..3428) /gene="LOC106085715" /note="activation loop (A-loop); other site" /db_xref="CDD:270892" ORIGIN 1 ggagccttaa taaagaaata ataaacttaa aaattaaaag caaaaatgtg acaacgatgg 61 caaatatttt gctcgacaat ttgcaattta catacaaaat gtccgccggc gctcaattgc 121 agatggcccc acagacatcg acgtcaataa gccatcatac aacgccacag caacagcaac 181 aacattttgt tcataatcct caacagcagc cgcaacaaca ggcgcaacca cagcagcagc 241 aagctatatt gtcacaagtc cagcagccgc agcctcaaat aatacaacag caaacacatc 301 aacaacagca gcagcaacaa caattgcagt tgcaacagca gcatataaca cattatacac 361 aacagcctcc gacgcttgcc acagcacacc atacaacaca tcttcaaccg cacccacagc 421 aacaaccaca gcatcaccat cttcaagggc aaacgccgca acaaggaagc cagcttccac 481 agcaacagca acatacgcaa catttgctgt tgcatcagca gcagcaacat agcggcggtg 541 gtcacagcag taatcctgac tcgaatatga gcactggctc ttcgcacagc gaaaaagatg 601 ttgttaatcc agatatgtta agcacacagc aacaatccag cggtattgtc caacaaattg 661 gtattttaca acaacagcaa acaactgtca acgtttcgcc agctggcaac ggtatgatga 721 acaccagcgg tatgggtata tcagctgatc ctaatgccat gcaaaccaca aaccaccacc 781 ttccacacca actgacacat cagcaacaga ccgtgggcgg tggcgctgct ggtggggttg 841 ttggaacaac gaccacaggt cgcatggaaa aactatcacg aacaccaact gaacgtaaac 901 gaaaaagaaa gatagccgca ttgcatgcgg atgatagtgg tggtgccggt ggtggaggtg 961 gaggcggcgg tcctggcagt ggcaatggag gtaataataa ttcaagcaac gctagtaaat 1021 cagctaaaca caacaattcc tcctcctcct caggcacaca gttattaaaa ccaaatttat 1081 ctctaaattt aggtgctcaa caggatcgtc tccaaatgcc cggttcaggt gtaggagggg 1141 gcggcaagac gccgcgacta ttgccgcccg gtagcggtgg ttcagttggc gataataaaa 1201 aaattaacga ctattttaat gcgaaacaca gtgtacagtc agcggccaat agtcctatga 1261 ggcatacagc tgggggtggc tcgaagagcc cctcatcggc tggcccgcag cagcagtcgc 1321 agcagccggg gccacaggcc caacaagtgc caacatccgt aggcggtaac agcacgtatc 1381 ccatgtatcc acctagtcca caacaaccac aaatgccagc acctggcata ccgcccacac 1441 ccacgtcaca acccccgcct ccagatttcc attacagtag tgtagtggcc gccaactcgg 1501 taacgggcaa gcagcaaagg caacagcaaa cttccaatgc aatggttcct ccgcaatcac 1561 cactcgttgg tgtcggtaat gttggtctaa tgtcatcctc ccacatggta cacaaccaat 1621 cagcagctgg ggcggcagcc ctattgggtg gccaagcaac aacaggtgcg ggcggcggag 1681 gcaatggccc accaccccct cctctgccac aacagcagca acagccaact cttcaacttc 1741 ccgcctcttc cgtcgttgct accaccgtgc aacaaacact gacgacctcg cagcaacagc 1801 aactggctgc tgcagcggcc gcccaactga attcactgca acatgccggc atgctgacaa 1861 acccaggcgg cggtgtacca cagaacgccg gtgcgcccca gcagcaaccc tcgacagcga 1921 tggttaccaa agcaacacaa accgacctct cacaacacga aatgcaagag cgtgaatcgg 1981 aaagtgaaac aagtaaatca aaattggatg agatgacaag actgtctgat gaacaaaaat 2041 gtcaaattat tgctcatcaa aaactaatcg atcaacataa atcccacata gccaagtgta 2101 ttgatgtggt caagaagcta ctgaaggaga agtccagcat tgagaaaaag gaggctcgcc 2161 agaaatgtat gcagaatcgc ctgcggctgg gccaattcgt tacacagcgt gtaggtgcta 2221 cattccagga gaactggact gatggttatg ccttccagga gttgagccga cgacaggagg 2281 aaatctccgc tgagcgcgaa gaaatcgatc gtcaaaagaa gcaactaatg aagaaacggc 2341 ctgccgaatc tggtcgaaag cgtaacaaca atagccagca gaattccaat tccaatgatt 2401 cctccaacct gaatgccggt tgtgatcgcc tatcgggcaa tgacagcggc attggtagtg 2461 taacttcagg gtccggcggt ggtggaagtg gtcgtggcct gacgcgatca aattcaacgc 2521 aagctcaaag tcaactgcta cacaatggcg gtggcagtgg caccagtggc actggcatag 2581 gtagtgatcg cctatcggat cgcggaggtg gcggttcggg acgcggcgat aattctggca 2641 gtggttccga ttcagcaacg ttccttaaac ccgatcctgt atcgggtgtc tataccgctc 2701 aagaatatta cgaatatgat gagattctta aactacgtca aaatgctctc aaaaaagaag 2761 atgccgatct tcagttggaa atggagaagt tagaacgtga acgcaatttg catatacgtg 2821 aattgaaacg cattttaaat gaagatcagt cccgctttaa taatcatcca gtattgaatg 2881 atcgttacct attgctgatg ctattgggta aaggtggttt ctctgaagtc cataaagcat 2941 tcgatttaaa ggaacaacgt tatgttgcat gtaaagttca tcaattgaat aaggattgga 3001 aagaagataa aaaggccaac tatatcaaac atgctttaag agaatataat attcataagg 3061 cactcgatca tcctagagtg gtgaaattat acgatgtctt tgaaattgat gccaattcat 3121 tttgtacggt tttggaatat tgtgatggtc atgatttaga tttttatcta aaacaacata 3181 agacgatacc agaacgtgaa gcacgttcaa taatcatgca ggttgtttct gctttaaaat 3241 atttgaatga gattaaacca ccagtcatac attacgattt gaaacctggt aatattttat 3301 taaccgaggg caatgtatgt ggcgagatca aaataaccga ttttggtttg tccaaagtaa 3361 tggacgatga aaattataat ccagatcatg gcatggacct aacctcccaa ggagcaggaa 3421 catattggta tttaccacct gaatgctttg ttgtgggtaa aaatcctcca aaaatctctt 3481 caaaagtcga tgtatggagt gtgggtgtta ttttctatca gtgtctgtat ggcaagaaac 3541 cgtttggcca taatcaatca caagctacta tcttagagga gaatacgatt ttaaaagcaa 3601 ctgaagtaca attctccaac aagcccacag tgtctaatga agctaagagt tttattagag 3661 gctgtctggc ttatcgcaaa gaagatcgca tggatgtatt ttcgctggcg cggcatgaat 3721 acatacaacc ccccattccg aagcatggcc gtggtcaatc gcttacccaa caacagcagc 3781 aacaacaaca gcagcaacaa cagcagcagc aacagcagca atcatcaggt aatcaagcca 3841 actctgccgg acagacatca ttctcagcgg gcatgtttgg caatttgaat caatcgagtt 3901 cgtcctagct gcacactaaa cgtaattcca attcataatt gttaaagtta atacaaagta 3961 atagtagcaa catcaatcat aatcaacaca acaacaacaa caacaataat aacaccaaca 4021 atcatcatcc acaacag