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LOCUS XM_013250087 4048 bp mRNA linear INV 02-SEP-2023 tousled-like 1 (LOC106085715), transcript variant X5, mRNA. ACCESSION XM_013250087 VERSION XM_013250087.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250087.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4048 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4048 /gene="LOC106085715" /note="serine/threonine-protein kinase tousled-like 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106085715" CDS 38..3919 /gene="LOC106085715" /codon_start=1 /product="serine/threonine-protein kinase tousled-like 1 isoform X3" /protein_id="XP_013105541.1" /db_xref="GeneID:106085715" /translation="MDQFQAALDPRKQELLEARFIGARMSAGAQLQMAPQTSTSISHH TTPQQQQQHFVHNPQQQPQQQAQPQQQQAILSQVQQPQPQIIQQQTHQQQQQQQQLQL QQQHITHYTQQPPTLATAHHTTHLQPHPQQQPQHHHLQGQTPQQGSQLPQQQQHTQHL LLHQQQQHSGGGHSSNPDSNMSTGSSHSEKDVVNPDMLSTQQQSSGIVQQIGILQQQQ TTVNVSPAGNGMMNTSGMGISADPNAMQTTNHHLPHQLTHQQQTVGGGAAGGVVGTTT TGRMEKLSRTPTERKRKRKIAALHADDSGGAGGGGGGGGPGSGNGGNNNSSNASKSAK HNNSSSSSGTQLLKPNLSLNLGAQQDRLQMPGSGVGGGGKTPRLLPPGSGGSVGDNKK INDYFNAKHSVQSAANSPMRHTAGGGSKSPSSAGPQQQSQQPGPQAQQVPTSVGGNST YPMYPPSPQQPQMPAPGIPPTPTSQPPPPDFHYSSVVAANSVTGKQQRQQQTSNAMVP PQSPLVGVGNVGLMSSSHMVHNQSAAGAAALLGGQATTGAGGGGNGPPPPPLPQQQQQ PTLQLPASSVVATTVQQTLTTSQQQQLAAAAAAQLNSLQHAGMLTNPGGGVPQNAGAP QQQPSTAMVTKATQTDLSQHEMQERESESETSKSKLDEMTRLSDEQKCQIIAHQKLID QHKSHIAKCIDVVKKLLKEKSSIEKKEARQKCMQNRLRLGQFVTQRVGATFQENWTDG YAFQELSRRQEEISAEREEIDRQKKQLMKKRPAESGRKRNNNSQQNSNSNDSSNLNAG CDRLSGNDSGIGSVTSGSGGGGSGRGLTRSNSTQAQSQLLHNGGGSGTSGTGIGSDRL SDRGGGGSGRGDNSGSGSDSATFLKPDPVSGVYTAQEYYEYDEILKLRQNALKKEDAD LQLEMEKLERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLMLLGKGGFSEVHKAF DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDAN SFCTVLEYCDGHDLDFYLKQHKTIPEREARSIIMQVVSALKYLNEIKPPVIHYDLKPG NILLTEGNVCGEIKITDFGLSKVMDDENYNPDHGMDLTSQGAGTYWYLPPECFVVGKN PPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFSNKPTVSN EAKSFIRGCLAYRKEDRMDVFSLARHEYIQPPIPKHGRGQSLTQQQQQQQQQQQQQQQ QQQSSGNQANSAGQTSFSAGMFGNLNQSSSS" misc_feature <1910..>2350 /gene="LOC106085715" /note="Family of unknown function (DUF5401); Region: DUF5401; pfam17380" /db_xref="CDD:375164" misc_feature 2930..3733 /gene="LOC106085715" /note="Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; Region: STKc_TLK; cd13990" /db_xref="CDD:270892" misc_feature order(2939..2941,2978..2980,2984..2986,3092..3094, 3143..3154,3164..3166,3170..3172,3287..3289,3293..3295, 3299..3304,3308..3310,3350..3352,3359..3361,3428..3439) /gene="LOC106085715" /note="active site" /db_xref="CDD:270892" misc_feature order(3164..3166,3170..3172,3287..3289,3293..3295, 3299..3301,3359..3361,3428..3439) /gene="LOC106085715" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270892" misc_feature order(3347..3385,3398..3439) /gene="LOC106085715" /note="activation loop (A-loop); other site" /db_xref="CDD:270892" ORIGIN 1 tctagggtgt gcattttttg tatattcttg aaacaagatg gaccaatttc aagcagcttt 61 ggatcctcgc aagcaggaac ttttagaagc acgttttatt ggagcacgga tgtccgccgg 121 cgctcaattg cagatggccc cacagacatc gacgtcaata agccatcata caacgccaca 181 gcaacagcaa caacattttg ttcataatcc tcaacagcag ccgcaacaac aggcgcaacc 241 acagcagcag caagctatat tgtcacaagt ccagcagccg cagcctcaaa taatacaaca 301 gcaaacacat caacaacagc agcagcaaca acaattgcag ttgcaacagc agcatataac 361 acattataca caacagcctc cgacgcttgc cacagcacac catacaacac atcttcaacc 421 gcacccacag caacaaccac agcatcacca tcttcaaggg caaacgccgc aacaaggaag 481 ccagcttcca cagcaacagc aacatacgca acatttgctg ttgcatcagc agcagcaaca 541 tagcggcggt ggtcacagca gtaatcctga ctcgaatatg agcactggct cttcgcacag 601 cgaaaaagat gttgttaatc cagatatgtt aagcacacag caacaatcca gcggtattgt 661 ccaacaaatt ggtattttac aacaacagca aacaactgtc aacgtttcgc cagctggcaa 721 cggtatgatg aacaccagcg gtatgggtat atcagctgat cctaatgcca tgcaaaccac 781 aaaccaccac cttccacacc aactgacaca tcagcaacag accgtgggcg gtggcgctgc 841 tggtggggtt gttggaacaa cgaccacagg tcgcatggaa aaactatcac gaacaccaac 901 tgaacgtaaa cgaaaaagaa agatagccgc attgcatgcg gatgatagtg gtggtgccgg 961 tggtggaggt ggaggcggcg gtcctggcag tggcaatgga ggtaataata attcaagcaa 1021 cgctagtaaa tcagctaaac acaacaattc ctcctcctcc tcaggcacac agttattaaa 1081 accaaattta tctctaaatt taggtgctca acaggatcgt ctccaaatgc ccggttcagg 1141 tgtaggaggg ggcggcaaga cgccgcgact attgccgccc ggtagcggtg gttcagttgg 1201 cgataataaa aaaattaacg actattttaa tgcgaaacac agtgtacagt cagcggccaa 1261 tagtcctatg aggcatacag ctgggggtgg ctcgaagagc ccctcatcgg ctggcccgca 1321 gcagcagtcg cagcagccgg ggccacaggc ccaacaagtg ccaacatccg taggcggtaa 1381 cagcacgtat cccatgtatc cacctagtcc acaacaacca caaatgccag cacctggcat 1441 accgcccaca cccacgtcac aacccccgcc tccagatttc cattacagta gtgtagtggc 1501 cgccaactcg gtaacgggca agcagcaaag gcaacagcaa acttccaatg caatggttcc 1561 tccgcaatca ccactcgttg gtgtcggtaa tgttggtcta atgtcatcct cccacatggt 1621 acacaaccaa tcagcagctg gggcggcagc cctattgggt ggccaagcaa caacaggtgc 1681 gggcggcgga ggcaatggcc caccaccccc tcctctgcca caacagcagc aacagccaac 1741 tcttcaactt cccgcctctt ccgtcgttgc taccaccgtg caacaaacac tgacgacctc 1801 gcagcaacag caactggctg ctgcagcggc cgcccaactg aattcactgc aacatgccgg 1861 catgctgaca aacccaggcg gcggtgtacc acagaacgcc ggtgcgcccc agcagcaacc 1921 ctcgacagcg atggttacca aagcaacaca aaccgacctc tcacaacacg aaatgcaaga 1981 gcgtgaatcg gaaagtgaaa caagtaaatc aaaattggat gagatgacaa gactgtctga 2041 tgaacaaaaa tgtcaaatta ttgctcatca aaaactaatc gatcaacata aatcccacat 2101 agccaagtgt attgatgtgg tcaagaagct actgaaggag aagtccagca ttgagaaaaa 2161 ggaggctcgc cagaaatgta tgcagaatcg cctgcggctg ggccaattcg ttacacagcg 2221 tgtaggtgct acattccagg agaactggac tgatggttat gccttccagg agttgagccg 2281 acgacaggag gaaatctccg ctgagcgcga agaaatcgat cgtcaaaaga agcaactaat 2341 gaagaaacgg cctgccgaat ctggtcgaaa gcgtaacaac aatagccagc agaattccaa 2401 ttccaatgat tcctccaacc tgaatgccgg ttgtgatcgc ctatcgggca atgacagcgg 2461 cattggtagt gtaacttcag ggtccggcgg tggtggaagt ggtcgtggcc tgacgcgatc 2521 aaattcaacg caagctcaaa gtcaactgct acacaatggc ggtggcagtg gcaccagtgg 2581 cactggcata ggtagtgatc gcctatcgga tcgcggaggt ggcggttcgg gacgcggcga 2641 taattctggc agtggttccg attcagcaac gttccttaaa cccgatcctg tatcgggtgt 2701 ctataccgct caagaatatt acgaatatga tgagattctt aaactacgtc aaaatgctct 2761 caaaaaagaa gatgccgatc ttcagttgga aatggagaag ttagaacgtg aacgcaattt 2821 gcatatacgt gaattgaaac gcattttaaa tgaagatcag tcccgcttta ataatcatcc 2881 agtattgaat gatcgttacc tattgctgat gctattgggt aaaggtggtt tctctgaagt 2941 ccataaagca ttcgatttaa aggaacaacg ttatgttgca tgtaaagttc atcaattgaa 3001 taaggattgg aaagaagata aaaaggccaa ctatatcaaa catgctttaa gagaatataa 3061 tattcataag gcactcgatc atcctagagt ggtgaaatta tacgatgtct ttgaaattga 3121 tgccaattca ttttgtacgg ttttggaata ttgtgatggt catgatttag atttttatct 3181 aaaacaacat aagacgatac cagaacgtga agcacgttca ataatcatgc aggttgtttc 3241 tgctttaaaa tatttgaatg agattaaacc accagtcata cattacgatt tgaaacctgg 3301 taatatttta ttaaccgagg gcaatgtatg tggcgagatc aaaataaccg attttggttt 3361 gtccaaagta atggacgatg aaaattataa tccagatcat ggcatggacc taacctccca 3421 aggagcagga acatattggt atttaccacc tgaatgcttt gttgtgggta aaaatcctcc 3481 aaaaatctct tcaaaagtcg atgtatggag tgtgggtgtt attttctatc agtgtctgta 3541 tggcaagaaa ccgtttggcc ataatcaatc acaagctact atcttagagg agaatacgat 3601 tttaaaagca actgaagtac aattctccaa caagcccaca gtgtctaatg aagctaagag 3661 ttttattaga ggctgtctgg cttatcgcaa agaagatcgc atggatgtat tttcgctggc 3721 gcggcatgaa tacatacaac cccccattcc gaagcatggc cgtggtcaat cgcttaccca 3781 acaacagcag caacaacaac agcagcaaca acagcagcag caacagcagc aatcatcagg 3841 taatcaagcc aactctgccg gacagacatc attctcagcg ggcatgtttg gcaatttgaa 3901 tcaatcgagt tcgtcctagc tgcacactaa acgtaattcc aattcataat tgttaaagtt 3961 aatacaaagt aatagtagca acatcaatca taatcaacac aacaacaaca acaacaataa 4021 taacaccaac aatcatcatc cacaacag